RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 STK4Q13043 487 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 NCOA4Q13772 614 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 DHCR24Q15392 516 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 C2orf27AQ580R0 203 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 ZNF667Q5HYK9 610 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 SCARA5Q6ZMJ2 495 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 PAQR9Q6ZVX9 377 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 RASSF3Q86WH2 238 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 DDX42Q86XP3 938 aaKnown RBP eCLIP13.29□□□□□ -0.28
VAMP1-206ENST00000538970 SLC9A9Q8IVB4 645 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 ADGRG2Q8IZP9 1017 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 NUP93Q8N1F7 819 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 TMEM174Q8WUU8 243 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 OVCA2Q8WZ82 227 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 DDX1Q92499 740 aaKnown RBP13.29□□□□□ -0.28
VAMP1-206ENST00000538970 FBXO32Q969P5 355 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 KCNK16Q96T55 309 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 SDCBP2Q9H190 292 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 SMOC1Q9H4F8 434 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 VPS45Q9NRW7 570 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 DMAC2Q9NW81 257 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 CFAP45Q9UL16 551 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 ATP8B3O60423 1300 aa13.29□□□□□ -0.28
VAMP1-206ENST00000538970 ZFYVE26Q68DK2 2539 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 TNFRSF10BO14763 440 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 COCHO43405 550 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 CLSTN1O94985 981 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 C4BPAP04003 597 aaKnown RBP13.28□□□□□ -0.28
VAMP1-206ENST00000538970 HSP90AA1P07900 732 aaKnown RBP13.28□□□□□ -0.28
VAMP1-206ENST00000538970 CHRM1P11229 460 aaPredicted RBP13.28□□□□□ -0.28
VAMP1-206ENST00000538970 EIF2DP41214 584 aaKnown RBP13.28□□□□□ -0.28
VAMP1-206ENST00000538970 DGKEP52429 567 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 SLC5A3P53794 718 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 DLG4P78352 724 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 MESP2Q0VG99 397 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 ELF2Q15723 593 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 KMT5BQ4FZB7 885 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 IL31Q6EBC2 164 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 C12orf40Q86WS4 652 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 SCAMP5Q8TAC9 235 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 ELMO3Q96BJ8 720 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 SMARCD1Q96GM5 515 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 PAGE5Q96GU1 130 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 TNIP3Q96KP6 325 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 ZFRQ96KR1 1074 aaKnown RBP13.28□□□□□ -0.28
VAMP1-206ENST00000538970 CNOT6LQ96LI5 555 aaKnown RBP13.28□□□□□ -0.28
VAMP1-206ENST00000538970 TPSD1Q9BZJ3 242 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 KCTD10Q9H3F6 313 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 DMAP1Q9NPF5 467 aaPredicted RBP13.28□□□□□ -0.28
VAMP1-206ENST00000538970 EXOC1Q9NV70 894 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 RCOR1Q9UKL0 485 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 MMP17Q9ULZ9 603 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 PKD1L2Q7Z442 2459 aa13.28□□□□□ -0.28
VAMP1-206ENST00000538970 E2F8A0AVK6 867 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 FAM92AA1XBS5 289 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 TM4SF5O14894 197 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 RHOBTB1O94844 696 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 ADH1CP00326 375 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 NR3C1P04150 777 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 ADH5P11766 374 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 PFKFB1P16118 471 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 SLC6A11P48066 632 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 TUBP50607 506 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 CRY1Q16526 586 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 ZACNQ401N2 412 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 STPG1Q5TH74 334 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 SNX30Q5VWJ9 437 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 TCEAL6Q6IPX3 200 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 ANO7Q6IWH7 933 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 RHBDF2Q6PJF5 856 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 SFTPA1Q8IWL2 248 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 FUKQ8N0W3 1084 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 ZMIZ2Q8NF64 920 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 MDGA1Q8NFP4 955 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 TCEAL3Q969E4 200 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 PNKPQ96T60 521 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 MED10Q9BTT4 135 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 KRT82Q9NSB4 513 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 IL37Q9NZH6 218 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 TBC1D14Q9P2M4 693 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 HMGXB4Q9UGU5 601 aa13.27□□□□□ -0.29
VAMP1-206ENST00000538970 ANKRD11Q6UB99 2663 aaPredicted RBP13.27□□□□□ -0.29
VAMP1-206ENST00000538970 CEP295Q9C0D2 2601 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 BCLAF3A2AJT9 711 aaKnown RBP13.26□□□□□ -0.29
VAMP1-206ENST00000538970 PDXKO00764 312 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 AP1G2O75843 785 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 KAT7O95251 611 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 ZDHHC11BP0C7U3 371 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 P4HA1P13674 534 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 CCDC130P13994 396 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 HNRNPLP14866 589 aaKnown RBP eCLIP13.26□□□□□ -0.29
VAMP1-206ENST00000538970 GBP1P32455 592 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 MRPS21P82921 87 aaKnown RBP13.26□□□□□ -0.29
VAMP1-206ENST00000538970 CREB5Q02930 508 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 ORC1Q13415 861 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 USP39Q53GS9 565 aaKnown RBP13.26□□□□□ -0.29
VAMP1-206ENST00000538970 HECTD3Q5T447 861 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 PMS2CLQ68D20 193 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 ACOT1Q86TX2 421 aa13.26□□□□□ -0.29
VAMP1-206ENST00000538970 C11orf74Q86VG3 221 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms