RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	MEA1	Q16626	185 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	HECTD3	Q5T447	861 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	RBM43	Q6ZSC3	357 aa	Known RBP	13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CCDC186	Q7Z3E2	898 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ANKRD52	Q8NB46	1076 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	EHBP1	Q8NDI1	1231 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ATP2A3	Q93084	1043 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	HEXIM2	Q96MH2	286 aa	Known RBP	13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	THAP9	Q9H5L6	903 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	TRPC7	Q9HCX4	862 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CYLD	Q9NQC7	956 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	TLR8	Q9NR97	1041 aa	Known RBP	13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	TBC1D14	Q9P2M4	693 aa		13.01	□□□□□ -0.33
CLTCL1-205	ENST00000538828	E2F8	A0AVK6	867 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	TRDMT1	O14717	391 aa	Known RBP	13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	BEST1	O76090	585 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	PAPSS2	O95340	614 aa	Predicted RBP	13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	DCN	P07585	359 aa	Known RBP	13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CHRNB1	P11230	501 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	VDR	P11473	427 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CD58	P19256	250 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	STX17	P56962	302 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	MAP3K7CL	P57077	242 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	RAB41	Q5JT25	222 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ENOSF1	Q7L5Y1	443 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	TADA2B	Q86TJ2	420 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	FAM114A1	Q8IWE2	563 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	SCML4	Q8N228	414 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CPA6	Q8N4T0	437 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CCDC26	Q8TAB7	109 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	SCAMP5	Q8TAC9	235 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	SH3RF2	Q8TEC5	729 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ELMO3	Q96BJ8	720 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	SLC22A12	Q96S37	553 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CYP2S1	Q96SQ9	504 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	HPS4	Q9NQG7	708 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	FAM49B	Q9NUQ9	324 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	GTSE1	Q9NYZ3	720 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CNTN6	Q9UQ52	1028 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	FAM186A	A6NE01	2351 aa		13	□□□□□ -0.33
CLTCL1-205	ENST00000538828	NFATC1	O95644	943 aa		12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ADORA2B	P29275	332 aa		12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	EIF2D	P41214	584 aa	Known RBP	12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	BCAT1	P54687	386 aa		12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	PPP2R5D	Q14738	602 aa		12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	EML3	Q32P44	896 aa		12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	FBXO43	Q4G163	708 aa		12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	SGO2	Q562F6	1265 aa		12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ZC3H14	Q6PJT7	736 aa	Known RBP	12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ARHGAP18	Q8N392	663 aa		12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	NELL1	Q92832	810 aa		12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ARID3A	Q99856	593 aa		12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	RNF38	Q9H0F5	515 aa		12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	SMG9	Q9H0W8	520 aa	Known RBP	12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ECT2	Q9H8V3	914 aa		12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	PRMT8	Q9NR22	394 aa	Predicted RBP	12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	DUS2	Q9NX74	493 aa	Known RBP	12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CLIC5	Q9NZA1	410 aa		12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	MTF2	Q9Y483	593 aa	Predicted RBP	12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828	PTPRZ1	P23471	2315 aa	Predicted RBP	12.99	□□□□□ -0.33
CLTCL1-205	ENST00000538828		H0Y858	1186 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	LEFTY2	O00292	366 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	XPO1	O14980	1071 aa	Known RBP	12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	LAMTOR5	O43504	91 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	SETSIP	P0DME0	302 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ACO1	P21399	889 aa	Known RBP	12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CD72	P21854	359 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	HOXA6	P31267	233 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	IFNAR2	P48551	515 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	BST2	Q10589	180 aa	Known RBP	12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CCIN	Q13939	588 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CNGA2	Q16280	664 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	PKDCC	Q504Y2	493 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ZNF394	Q53GI3	561 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	TMEM196	Q5HYL7	178 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	PM20D1	Q6GTS8	502 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	LCLAT1	Q6UWP7	414 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	IRF2BP1	Q8IU81	584 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	SPEM1	Q8N4L4	309 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	RIN3	Q8TB24	985 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	KCTD13	Q8WZ19	329 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ATOH1	Q92858	354 aa	Predicted RBP	12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ZFYVE19	Q96K21	471 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CNOT6L	Q96LI5	555 aa	Known RBP	12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	MED15	Q96RN5	788 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	LMAN1L	Q9HAT1	526 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	HESX1	Q9UBX0	185 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CHORDC1	Q9UHD1	332 aa	Predicted RBP	12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828	CPQ	Q9Y646	472 aa		12.98	□□□□□ -0.33
CLTCL1-205	ENST00000538828		O00370	1275 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	COCH	O43405	550 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	TLR5	O60602	858 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	MBD3	O95983	291 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	MBL2	P11226	248 aa	Predicted RBP	12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	DRD1	P21728	446 aa		12.97	□□□□□ -0.33
CLTCL1-205	ENST00000538828	ATP5C1	P36542	298 aa	Known RBP	12.97	□□□□□ -0.33

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