RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 TKTL1P51854 596 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 ERVFC1P60507 584 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 ERVK-21P61565 698 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 UBE3AQ05086 875 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 DDR2Q16832 855 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 DNTTIP2Q5QJE6 756 aaKnown RBP14.87□□□□□ -0.03
CD4-208ENST00000538827 DCUN1D2Q6PH85 259 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 VSTM1Q6UX27 236 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 SPPL3Q8TCT6 385 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 MICAL1Q8TDZ2 1067 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 CLEC4CQ8WTT0 213 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 ARNTL2Q8WYA1 636 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 ZNF592Q92610 1267 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 BTBD6Q96KE9 485 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 EMILIN2Q9BXX0 1053 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 ULBP1Q9BZM6 244 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 KCNH6Q9H252 994 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 CSNK1G1Q9HCP0 422 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 ABCB6Q9NP58 842 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 CYLDQ9NQC7 956 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 SLC27A5Q9Y2P5 690 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 PCDHGC5Q9Y5F6 944 aa14.87□□□□□ -0.03
CD4-208ENST00000538827 GRID2IPA4D2P6 1211 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 TEX28O15482 410 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 PAPSS1O43252 624 aaPredicted RBP14.86□□□□□ -0.03
CD4-208ENST00000538827 PALMO75781 387 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 GRAP2O75791 330 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 VNN2O95498 520 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 ADH1AP07327 375 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 TNNT1P13805 278 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 DNAJB1P25685 340 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 ELF1P32519 619 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 SLC5A3P53794 718 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 GSCP56915 257 aaPredicted RBP14.86□□□□□ -0.03
CD4-208ENST00000538827 RNASE9P60153 205 aaKnown RBP14.86□□□□□ -0.03
CD4-208ENST00000538827 DUSP4Q13115 394 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 MAMLD1Q13495 774 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 ZNF268Q14587 947 aaPredicted RBP14.86□□□□□ -0.03
CD4-208ENST00000538827 MESDQ14696 234 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 PLEKHA7Q6IQ23 1121 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 OLFML1Q6UWY5 402 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 SYT10Q6XYQ8 523 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 NYAP1Q6ZVC0 841 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 DAAM2Q86T65 1068 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 MICALL1Q8N3F8 863 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 RNF10Q8N5U6 811 aaKnown RBP14.86□□□□□ -0.03
CD4-208ENST00000538827 TPCN2Q8NHX9 752 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 FEZF2Q8TBJ5 459 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 GDPD5Q8WTR4 605 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 KCTD13Q8WZ19 329 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 MCRS1Q96EZ8 462 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 PIWIL1Q96J94 861 aaKnown RBP14.86□□□□□ -0.03
CD4-208ENST00000538827 CRISPLD1Q9H336 500 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 GOLPH3Q9H4A6 298 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 CYP4F11Q9HBI6 524 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 FNIP2Q9P278 1114 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 AFF4Q9UHB7 1163 aaKnown RBP14.86□□□□□ -0.03
CD4-208ENST00000538827 DNAI1Q9UI46 699 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 GREB1Q4ZG55 1949 aa14.86□□□□□ -0.03
CD4-208ENST00000538827 HHLA1C9JL84 531 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 KIF2AO00139 706 aaPredicted RBP14.85□□□□□ -0.03
CD4-208ENST00000538827 PRRG1O14668 218 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 BUB1BO60566 1050 aaPredicted RBP14.85□□□□□ -0.03
CD4-208ENST00000538827 GABBR2O75899 941 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 FTCDO95954 541 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 CNPP09543 421 aaKnown RBP14.85□□□□□ -0.03
CD4-208ENST00000538827 KRT3P12035 628 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 RPL10AP62906 217 aaKnown RBP14.85□□□□□ -0.03
CD4-208ENST00000538827 SLC6A3Q01959 620 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 RAB33AQ14088 237 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 TPGS2Q68CL5 300 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 TMEM110Q86TL2 294 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 ZDHHC17Q8IUH5 632 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 SCUBE3Q8IX30 993 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 GPR65Q8IYL9 337 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 EMC1Q8N766 993 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 TRIM58Q8NG06 486 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 JOSD2Q8TAC2 188 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 GPR152Q8TDT2 470 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 GIPC2Q8TF65 315 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 NDRG1Q92597 394 aaKnown RBP14.85□□□□□ -0.03
CD4-208ENST00000538827 FAM149B1Q96BN6 582 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 C8orf48Q96LL4 319 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 KLHL5Q96PQ7 755 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 TRIM7Q9C029 511 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 RXFP1Q9HBX9 757 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 PNPLA8Q9NP80 782 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 YIPF1Q9Y548 306 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 ZNF638Q14966 1978 aaKnown RBP14.85□□□□□ -0.03
CD4-208ENST00000538827 REV3LO60673 3130 aa14.85□□□□□ -0.03
CD4-208ENST00000538827 TCRBV5S1A1TA0A578 114 aa14.84□□□□□ -0.03
CD4-208ENST00000538827 FAM86C2PA6NEL3 165 aa14.84□□□□□ -0.03
CD4-208ENST00000538827 HIDE1A8MVS5 230 aa14.84□□□□□ -0.03
CD4-208ENST00000538827 FSCN2O14926 492 aa14.84□□□□□ -0.03
CD4-208ENST00000538827 MTA2O94776 668 aa14.84□□□□□ -0.03
CD4-208ENST00000538827 FBXO21O94952 628 aa14.84□□□□□ -0.03
CD4-208ENST00000538827 SEC24AO95486 1093 aa14.84□□□□□ -0.03
CD4-208ENST00000538827 USP17L7P0C7H9 530 aa14.84□□□□□ -0.03
CD4-208ENST00000538827 KLRC2P26717 231 aa14.84□□□□□ -0.03
CD4-208ENST00000538827 CASQ1P31415 396 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms