RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 FITM2Q8N6M3 262 aa26■■□□□ 1.75
RAB40C-204ENST00000538492 LRRN4Q8WUT4 740 aa26■■□□□ 1.75
RAB40C-204ENST00000538492 EIF2AQ9BY44 585 aaKnown RBP26■■□□□ 1.75
RAB40C-204ENST00000538492 B3GNT5Q9BYG0 378 aa26■■□□□ 1.75
RAB40C-204ENST00000538492 CD248Q9HCU0 757 aa26■■□□□ 1.75
RAB40C-204ENST00000538492 SMG5Q9UPR3 1016 aaKnown RBP26■■□□□ 1.75
RAB40C-204ENST00000538492 HEY1Q9Y5J3 304 aa26■■□□□ 1.75
RAB40C-204ENST00000538492 E7ESA3 106 aa25.99■■□□□ 1.75
RAB40C-204ENST00000538492 STAU1O95793 577 aaKnown RBP25.99■■□□□ 1.75
RAB40C-204ENST00000538492 MMP3P08254 477 aa25.99■■□□□ 1.75
RAB40C-204ENST00000538492 MGAT5Q09328 741 aa25.99■■□□□ 1.75
RAB40C-204ENST00000538492 TBC1D1Q86TI0 1168 aaPredicted RBP25.99■■□□□ 1.75
RAB40C-204ENST00000538492 IGDCC3Q8IVU1 814 aa25.99■■□□□ 1.75
RAB40C-204ENST00000538492 CCDC63Q8NA47 563 aa25.99■■□□□ 1.75
RAB40C-204ENST00000538492 C18orf25Q96B23 403 aaPredicted RBP25.99■■□□□ 1.75
RAB40C-204ENST00000538492 RNF157Q96PX1 679 aa25.99■■□□□ 1.75
RAB40C-204ENST00000538492 SLCO1B3Q9NPD5 702 aa25.99■■□□□ 1.75
RAB40C-204ENST00000538492 HCRTO43612 131 aa25.99■■□□□ 1.75
RAB40C-204ENST00000538492 YBX3P16989 372 aaKnown RBP eCLIP25.99■■□□□ 1.75
RAB40C-204ENST00000538492 HOXA11P31270 313 aaPredicted RBP25.99■■□□□ 1.75
RAB40C-204ENST00000538492 RNASELQ05823 741 aaKnown RBP25.99■■□□□ 1.75
RAB40C-204ENST00000538492 OLFML1Q6UWY5 402 aa25.99■■□□□ 1.75
RAB40C-204ENST00000538492 FAM172AQ8WUF8 416 aa25.99■■□□□ 1.75
RAB40C-204ENST00000538492 MIS12Q9H081 205 aa25.99■■□□□ 1.75
RAB40C-204ENST00000538492 ACSS3Q9H6R3 686 aa25.99■■□□□ 1.75
RAB40C-204ENST00000538492 CDHR5Q9HBB8 845 aa25.99■■□□□ 1.75
RAB40C-204ENST00000538492 KLHL14Q9P2G3 628 aa25.99■■□□□ 1.75
RAB40C-204ENST00000538492 BTBD19C9JJ37 291 aa25.98■■□□□ 1.75
RAB40C-204ENST00000538492 TYROBPO43914 113 aa25.98■■□□□ 1.75
RAB40C-204ENST00000538492 YARSP54577 528 aaKnown RBP25.98■■□□□ 1.75
RAB40C-204ENST00000538492 NT5DC4Q86YG4 428 aa25.98■■□□□ 1.75
RAB40C-204ENST00000538492 PPCSQ9HAB8 311 aa25.98■■□□□ 1.75
RAB40C-204ENST00000538492 IL4RP24394 825 aa25.98■■□□□ 1.75
RAB40C-204ENST00000538492 TFDP2Q14188 446 aa25.98■■□□□ 1.75
RAB40C-204ENST00000538492 TTC39CQ8N584 583 aa25.98■■□□□ 1.75
RAB40C-204ENST00000538492 OR6J1Q8NGC5 347 aa25.98■■□□□ 1.75
RAB40C-204ENST00000538492 ECT2Q9H8V3 914 aa25.98■■□□□ 1.75
RAB40C-204ENST00000538492 GOLGA8RI6L899 631 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 ADCY6O43306 1168 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 AVILO75366 819 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 STIP1P31948 543 aaKnown RBP25.97■■□□□ 1.75
RAB40C-204ENST00000538492 ELK3P41970 407 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 GCLCP48506 637 aaPredicted RBP25.97■■□□□ 1.75
RAB40C-204ENST00000538492 ELF3P78545 371 aaPredicted RBP25.97■■□□□ 1.75
RAB40C-204ENST00000538492 CA9Q16790 459 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 FAM47CQ5HY64 1035 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 CATSPER4Q7RTX7 472 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 ZNF410Q86VK4 478 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 PLD5Q8N7P1 536 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 KLF6Q99612 283 aaPredicted RBP25.97■■□□□ 1.75
RAB40C-204ENST00000538492 PHACTR1Q9C0D0 580 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 CENPFP49454 3210 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 SDC4P31431 198 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 GALNTL6Q49A17 601 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 MAP7D3Q8IWC1 876 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 C7orf31Q8N865 590 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 OR6B3Q8NGW1 331 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 APOL6Q9BWW8 343 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 DPEP3Q9H4B8 488 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 PHTF1Q9UMS5 762 aa25.97■■□□□ 1.75
RAB40C-204ENST00000538492 GABBR2O75899 941 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 TFE3P19532 575 aaPredicted RBP25.96■■□□□ 1.75
RAB40C-204ENST00000538492 MSH2P43246 934 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 NCALDP61601 193 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 RASA2Q15283 850 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 KLHL38Q2WGJ6 581 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 DCAF4L1Q3SXM0 396 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 DUSP28Q4G0W2 176 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 PKDCCQ504Y2 493 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 HHATQ5VTY9 493 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 ADGRD1Q6QNK2 874 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 ECHDC2Q86YB7 292 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 KHSRPQ92945 711 aaKnown RBP eCLIP25.96■■□□□ 1.75
RAB40C-204ENST00000538492 KCNN4O15554 427 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 PAPSS1O43252 624 aaPredicted RBP25.96■■□□□ 1.75
RAB40C-204ENST00000538492 SLC18A1P54219 525 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 SLC6A3Q01959 620 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 DGKDQ16760 1214 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 PPP6R3Q5H9R7 873 aaPredicted RBP25.96■■□□□ 1.75
RAB40C-204ENST00000538492 LVRNQ6Q4G3 990 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 GTF3C2Q8WUA4 911 aaPredicted RBP25.96■■□□□ 1.75
RAB40C-204ENST00000538492 FAF2Q96CS3 445 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 OSMRQ99650 979 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 C12orf65Q9H3J6 166 aaKnown RBP25.96■■□□□ 1.75
RAB40C-204ENST00000538492 RXFP1Q9HBX9 757 aa25.96■■□□□ 1.75
RAB40C-204ENST00000538492 CCL15-CCL14A0A0B4J2E2 113 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 STRNO43815 780 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 STILQ15468 1287 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 SNCBQ16143 134 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 PDK4Q16654 411 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 CCL15Q16663 113 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 FAXCQ5TGI0 409 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 GPR142Q7Z601 462 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 PQLC3Q8N755 202 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 SLC35F5Q8WV83 523 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 DCAKDQ8WVC6 231 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 GRAMD1AQ96CP6 724 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 SNX27Q96L92 541 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 SNRNP25Q9BV90 132 aaKnown RBP25.95■■□□□ 1.74
RAB40C-204ENST00000538492 ADAMTS10Q9H324 1103 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms