RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 Q9Y3F1 56 aa11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 DOCK3Q8IZD9 2030 aa11.93□□□□□ -0.5
SLC28A1-204ENST00000538177 CLUHO75153 1309 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 A8MXQ7 604 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 ZNF487B1APH4 448 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 TREHO43280 583 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 VIMP08670 466 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 PNPLA4P41247 253 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 CPT1AP50416 773 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 GPX6P59796 221 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 ATP11AP98196 1134 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 ROR1Q01973 937 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 ITIH4Q14624 930 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 LRRC14Q15048 493 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 CDO1Q16878 200 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 HP1BP3Q5SSJ5 553 aaPredicted RBP11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 FNBP1LQ5T0N5 605 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 NPNTQ6UXI9 565 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 ARCQ7LC44 396 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 MICALL1Q8N3F8 863 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 PLD5Q8N7P1 536 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 MGARPQ8TDB4 240 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 FAM172AQ8WUF8 416 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 DYDC1Q8WWB3 177 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 LENG1Q96BZ8 264 aaPredicted RBP11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 OSBPL7Q9BZF2 842 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 NSRP1Q9H0G5 558 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 DPEP3Q9H4B8 488 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 VPS37BQ9H9H4 285 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 PCDH18Q9HCL0 1135 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 CYLDQ9NQC7 956 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 FETUBQ9UGM5 382 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 TCRBV7S3A2A0A539 114 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 KPNA7A9QM74 516 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 RASA4BC9J798 803 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 GOLGA8MH3BSY2 632 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 MDM4O15151 490 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 SPTLC1O15269 473 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 RASA4O43374 803 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 XPOTO43592 962 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 FGFR1P11362 822 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 TSHRP16473 764 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 DESP17661 470 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 GNL1P36915 607 aaPredicted RBP11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 PTPN9P43378 593 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 CRYBB1P53674 252 aaPredicted RBP11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 GAD2Q05329 585 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 BST2Q10589 180 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 CBLBQ13191 982 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 KRT81Q14533 505 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 TMED2Q15363 201 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 MSS51Q4VC12 460 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 LACTB2Q53H82 288 aaPredicted RBP11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 EFHC2Q5JST6 749 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 DARS2Q6PI48 645 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 PPP1R21Q6ZMI0 780 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 ARHGEF18Q6ZSZ5 1173 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 SLC26A9Q7LBE3 791 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 NME8Q8N427 588 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 ANKRD42Q8N9B4 389 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 ZNF560Q96MR9 790 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 C11orf84Q9BUA3 381 aaPredicted RBP11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 APOL6Q9BWW8 343 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 RNF39Q9H2S5 420 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 NGRNQ9NPE2 291 aaKnown RBP11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 SAMD15Q9P1V8 674 aa11.92□□□□□ -0.5
SLC28A1-204ENST00000538177 GOLGA6L7A0A1B0GV03 622 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 CAPN15O75808 1086 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 ECM2O94769 699 aaPredicted RBP11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 TMEM63AO94886 807 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 IGHA2P01877 340 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 TGM2P21980 687 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 HOXC8P31273 242 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 SLC18A1P54219 525 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 BCAT1P54687 386 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 HDAC4P56524 1084 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 ZNF200P98182 395 aaPredicted RBP11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 ACTN3Q08043 901 aaPredicted RBP11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 ANKRD20A8PQ5CZ79 823 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 ZC3H12AQ5D1E8 599 aaKnown RBP11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 SLC9A4Q6AI14 798 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 SCYL2Q6P3W7 929 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 PQLC3Q8N755 202 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 C7orf31Q8N865 590 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 ANKS4BQ8N8V4 417 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 ATP11CQ8NB49 1132 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 PYROXD1Q8WU10 500 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 CCT6BQ92526 530 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 CENPIQ92674 756 aaPredicted RBP11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 FAF2Q96CS3 445 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 RTP4Q96DX8 246 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 ELAC2Q9BQ52 826 aaKnown RBP11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 LPIN3Q9BQK8 851 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 WDR83Q9BRX9 315 aaKnown RBP11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 SNRNP25Q9BV90 132 aaKnown RBP11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 B3GNT5Q9BYG0 378 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 ACTR5Q9H9F9 607 aaPredicted RBP11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 USP29Q9HBJ7 922 aa11.91□□□□□ -0.5
SLC28A1-204ENST00000538177 RNF19AQ9NV58 838 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms