RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 HEXIM2Q96MH2 286 aaKnown RBP15.65■□□□□ 0.1
USP28-204ENST00000537642 SRRTQ9BXP5 876 aaKnown RBP15.65■□□□□ 0.1
USP28-204ENST00000537642 CLSTN2Q9H4D0 955 aa15.65■□□□□ 0.1
USP28-204ENST00000537642 FAM124BQ9H5Z6 455 aaPredicted RBP15.65■□□□□ 0.1
USP28-204ENST00000537642 RBM12Q9NTZ6 932 aaKnown RBP15.65■□□□□ 0.1
USP28-204ENST00000537642 DUS2Q9NX74 493 aaKnown RBP15.65■□□□□ 0.1
USP28-204ENST00000537642 CPQQ9Y646 472 aa15.65■□□□□ 0.1
USP28-204ENST00000537642 IFNAR2P48551 515 aa15.64■□□□□ 0.09
USP28-204ENST00000537642 PGFP49763 221 aa15.64■□□□□ 0.09
USP28-204ENST00000537642 MARSP56192 900 aaKnown RBP15.64■□□□□ 0.09
USP28-204ENST00000537642 LRMPQ12912 555 aa15.64■□□□□ 0.09
USP28-204ENST00000537642 GAS6Q14393 721 aa15.64■□□□□ 0.09
USP28-204ENST00000537642 EML3Q32P44 896 aa15.64■□□□□ 0.09
USP28-204ENST00000537642 TRIM59Q8IWR1 403 aa15.64■□□□□ 0.09
USP28-204ENST00000537642 UBR7Q8N806 425 aa15.64■□□□□ 0.09
USP28-204ENST00000537642 JAKMIP2Q96AA8 810 aa15.64■□□□□ 0.09
USP28-204ENST00000537642 MED15Q96RN5 788 aa15.64■□□□□ 0.09
USP28-204ENST00000537642 DUSP16Q9BY84 665 aa15.64■□□□□ 0.09
USP28-204ENST00000537642 DNAI2Q9GZS0 605 aa15.64■□□□□ 0.09
USP28-204ENST00000537642 LINC00597Q9H2U6 94 aa15.64■□□□□ 0.09
USP28-204ENST00000537642 FBXO44Q9H4M3 255 aa15.64■□□□□ 0.09
USP28-204ENST00000537642 ECT2Q9H8V3 914 aa15.64■□□□□ 0.09
USP28-204ENST00000537642 SMPD4Q9NXE4 827 aa15.64■□□□□ 0.09
USP28-204ENST00000537642 FBXO4Q9UKT5 387 aa15.64■□□□□ 0.09
USP28-204ENST00000537642 ATG2BQ96BY7 2078 aa15.64■□□□□ 0.09
USP28-204ENST00000537642 COCHO43405 550 aa15.63■□□□□ 0.09
USP28-204ENST00000537642 GNA14O95837 355 aa15.63■□□□□ 0.09
USP28-204ENST00000537642 MBL2P11226 248 aaPredicted RBP15.63■□□□□ 0.09
USP28-204ENST00000537642 CCINQ13939 588 aa15.63■□□□□ 0.09
USP28-204ENST00000537642 LRRC32Q14392 662 aa15.63■□□□□ 0.09
USP28-204ENST00000537642 HECTD3Q5T447 861 aa15.63■□□□□ 0.09
USP28-204ENST00000537642 ARHGAP17Q68EM7 881 aa15.63■□□□□ 0.09
USP28-204ENST00000537642 CPA6Q8N4T0 437 aa15.63■□□□□ 0.09
USP28-204ENST00000537642 LMO3Q8TAP4 145 aa15.63■□□□□ 0.09
USP28-204ENST00000537642 ATP2A3Q93084 1043 aa15.63■□□□□ 0.09
USP28-204ENST00000537642 ZFRQ96KR1 1074 aaKnown RBP15.63■□□□□ 0.09
USP28-204ENST00000537642 IER2Q9BTL4 223 aa15.63■□□□□ 0.09
USP28-204ENST00000537642 CCSER2Q9H7U1 834 aa15.63■□□□□ 0.09
USP28-204ENST00000537642 PNPLA8Q9NP80 782 aa15.63■□□□□ 0.09
USP28-204ENST00000537642 PRMT8Q9NR22 394 aaPredicted RBP15.63■□□□□ 0.09
USP28-204ENST00000537642 RWDD2AQ9UIY3 292 aa15.63■□□□□ 0.09
USP28-204ENST00000537642 SCML2Q9UQR0 700 aa15.63■□□□□ 0.09
USP28-204ENST00000537642 R4GN57 208 aa15.63■□□□□ 0.09
USP28-204ENST00000537642 MYOFQ9NZM1 2061 aa15.63■□□□□ 0.09
USP28-204ENST00000537642 ZFHX2Q9C0A1 2572 aaPredicted RBP15.62■□□□□ 0.09
USP28-204ENST00000537642 P4HA2O15460 535 aa15.62■□□□□ 0.09
USP28-204ENST00000537642 GFRA3O60609 400 aa15.62■□□□□ 0.09
USP28-204ENST00000537642 ACO1P21399 889 aaKnown RBP15.62■□□□□ 0.09
USP28-204ENST00000537642 GJA4P35212 333 aa15.62■□□□□ 0.09
USP28-204ENST00000537642 TUBP50607 506 aa15.62■□□□□ 0.09
USP28-204ENST00000537642 KIF11P52732 1056 aa15.62■□□□□ 0.09
USP28-204ENST00000537642 CSTF1Q05048 431 aaKnown RBP15.62■□□□□ 0.09
USP28-204ENST00000537642 KCNH2Q12809 1159 aa15.62■□□□□ 0.09
USP28-204ENST00000537642 ZNF528Q3MIS6 628 aa15.62■□□□□ 0.09
USP28-204ENST00000537642 TMEM196Q5HYL7 178 aa15.62■□□□□ 0.09
USP28-204ENST00000537642 DGKKQ5KSL6 1271 aa15.62■□□□□ 0.09
USP28-204ENST00000537642 NAIF1Q69YI7 327 aaPredicted RBP15.62■□□□□ 0.09
USP28-204ENST00000537642 TSSK4Q6SA08 328 aa15.62■□□□□ 0.09
USP28-204ENST00000537642 MAMSTRQ6ZN01 415 aa15.62■□□□□ 0.09
USP28-204ENST00000537642 Q6ZS52 159 aa15.62■□□□□ 0.09
USP28-204ENST00000537642 ASCL5Q7RTU5 278 aa15.62■□□□□ 0.09
USP28-204ENST00000537642 NT5C1BQ96P26 610 aa15.62■□□□□ 0.09
USP28-204ENST00000537642 LMBRD1Q9NUN5 540 aa15.62■□□□□ 0.09
USP28-204ENST00000537642 CFAP97Q9P2B7 532 aa15.62■□□□□ 0.09
USP28-204ENST00000537642 PRR23AA6NEV1 266 aa15.61■□□□□ 0.09
USP28-204ENST00000537642 TRDMT1O14717 391 aaKnown RBP15.61■□□□□ 0.09
USP28-204ENST00000537642 SCAMP3O14828 347 aaKnown RBP15.61■□□□□ 0.09
USP28-204ENST00000537642 CYP26A1O43174 497 aa15.61■□□□□ 0.09
USP28-204ENST00000537642 FGFR1OPO95684 399 aaKnown RBP15.61■□□□□ 0.09
USP28-204ENST00000537642 TBXAS1P24557 533 aaPredicted RBP15.61■□□□□ 0.09
USP28-204ENST00000537642 YWHAEP62258 255 aaKnown RBP15.61■□□□□ 0.09
USP28-204ENST00000537642 FSTL4Q6MZW2 842 aa15.61■□□□□ 0.09
USP28-204ENST00000537642 KIAA1958Q8N8K9 716 aa15.61■□□□□ 0.09
USP28-204ENST00000537642 KAT5Q92993 513 aa15.61■□□□□ 0.09
USP28-204ENST00000537642 NKD2Q969F2 451 aaPredicted RBP15.61■□□□□ 0.09
USP28-204ENST00000537642 FBRSL1Q9HCM7 1045 aaKnown RBP15.61■□□□□ 0.09
USP28-204ENST00000537642 TLR8Q9NR97 1041 aaKnown RBP15.61■□□□□ 0.09
USP28-204ENST00000537642 OSER1Q9NX31 292 aa15.61■□□□□ 0.09
USP28-204ENST00000537642 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.61■□□□□ 0.09
USP28-204ENST00000537642 RIF1Q5UIP0 2472 aaKnown RBP15.6■□□□□ 0.09
USP28-204ENST00000537642 TLR5O60602 858 aa15.6■□□□□ 0.09
USP28-204ENST00000537642 NFATC1O95644 943 aa15.6■□□□□ 0.09
USP28-204ENST00000537642 AFPP02771 609 aaKnown RBP15.6■□□□□ 0.09
USP28-204ENST00000537642 CCDC192P0DO97 292 aa15.6■□□□□ 0.09
USP28-204ENST00000537642 TDGF1P13385 188 aa15.6■□□□□ 0.09
USP28-204ENST00000537642 GALK1P51570 392 aa15.6■□□□□ 0.09
USP28-204ENST00000537642 AMPD2Q01433 879 aa15.6■□□□□ 0.09
USP28-204ENST00000537642 SATB1Q01826 763 aa15.6■□□□□ 0.09
USP28-204ENST00000537642 CETN1Q12798 172 aa15.6■□□□□ 0.09
USP28-204ENST00000537642 TTC30AQ86WT1 665 aa15.6■□□□□ 0.09
USP28-204ENST00000537642 DDX42Q86XP3 938 aaKnown RBP eCLIP15.6■□□□□ 0.09
USP28-204ENST00000537642 ARHGEF19Q8IW93 802 aa15.6■□□□□ 0.09
USP28-204ENST00000537642 PPM1KQ8N3J5 372 aa15.6■□□□□ 0.09
USP28-204ENST00000537642 SPEM1Q8N4L4 309 aa15.6■□□□□ 0.09
USP28-204ENST00000537642 MLKLQ8NB16 471 aa15.6■□□□□ 0.09
USP28-204ENST00000537642 ANKRD52Q8NB46 1076 aa15.6■□□□□ 0.09
USP28-204ENST00000537642 EHBP1Q8NDI1 1231 aa15.6■□□□□ 0.09
USP28-204ENST00000537642 NELL1Q92832 810 aa15.6■□□□□ 0.09
USP28-204ENST00000537642 NMUR1Q9HB89 426 aa15.6■□□□□ 0.09
USP28-204ENST00000537642 USP3Q9Y6I4 520 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms