RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 DDR2Q16832 855 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 FUT11Q495W5 492 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 SEZ6Q53EL9 994 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 LY6G5CQ5SRR4 150 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 XKR5Q6UX68 686 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 FAM124AQ86V42 546 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 LSMEM2Q8N112 164 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 TERB1Q8NA31 727 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 PIGOQ8TEQ8 1089 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 LNPKQ9C0E8 428 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 SLC25A18Q9H1K4 315 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 THSD1Q9NS62 852 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 ADAMTS1Q9UHI8 967 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 DDX25Q9UHL0 483 aaKnown RBP10.24□□□□□ -0.77
CPSF7-217ENST00000537162 MED13Q9UHV7 2174 aa10.24□□□□□ -0.77
CPSF7-217ENST00000537162 PRRT4C9JH25 899 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 ITGAVP06756 1048 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 CSH1P0DML2 217 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 CSH2P0DML3 217 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 TYMPP19971 482 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 ADD1P35611 737 aaKnown RBP10.23□□□□□ -0.77
CPSF7-217ENST00000537162 RPL10AP62906 217 aaKnown RBP10.23□□□□□ -0.77
CPSF7-217ENST00000537162 ILKQ13418 452 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 KCNB1Q14721 858 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 SAFBQ15424 915 aaKnown RBP eCLIP10.23□□□□□ -0.77
CPSF7-217ENST00000537162 TEAD4Q15561 434 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 TBR1Q16650 682 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 SLC10A6Q3KNW5 377 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 CDCP2Q5VXM1 449 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 METTL3Q86U44 580 aaKnown RBP10.23□□□□□ -0.77
CPSF7-217ENST00000537162 CACUL1Q86Y37 369 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 ZNF564Q8TBZ8 553 aaPredicted RBP10.23□□□□□ -0.77
CPSF7-217ENST00000537162 HAS1Q92839 578 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 CCNL2Q96S94 520 aaPredicted RBP10.23□□□□□ -0.77
CPSF7-217ENST00000537162 ORAI3Q9BRQ5 295 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 RNF38Q9H0F5 515 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 C2orf40Q9H1Z8 148 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 PTPRHQ9HD43 1115 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 KCNMB3Q9NPA1 279 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 ANKEF1Q9NU02 776 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 VPS54Q9P1Q0 977 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 TNFSF13BQ9Y275 285 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 STARD13Q9Y3M8 1113 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 HIVEP1P15822 2718 aa10.23□□□□□ -0.77
CPSF7-217ENST00000537162 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-217ENST00000537162 LAD1O00515 517 aa10.22□□□□□ -0.77
CPSF7-217ENST00000537162 ABLIM1O14639 778 aa10.22□□□□□ -0.77
CPSF7-217ENST00000537162 NOL4O94818 638 aa10.22□□□□□ -0.77
CPSF7-217ENST00000537162 NFICP08651 508 aa10.22□□□□□ -0.77
CPSF7-217ENST00000537162 CKMT2P17540 419 aa10.22□□□□□ -0.77
CPSF7-217ENST00000537162 LRPAP1P30533 357 aa10.22□□□□□ -0.77
CPSF7-217ENST00000537162 BNIP3Q12983 259 aa10.22□□□□□ -0.77
CPSF7-217ENST00000537162 GSE1Q14687 1217 aa10.22□□□□□ -0.77
CPSF7-217ENST00000537162 ZNF568Q3ZCX4 644 aa10.22□□□□□ -0.77
CPSF7-217ENST00000537162 PPP4R3AQ6IN85 833 aa10.22□□□□□ -0.77
CPSF7-217ENST00000537162 USP53Q70EK8 1073 aa10.22□□□□□ -0.77
CPSF7-217ENST00000537162 SPPL2BQ8TCT7 592 aa10.22□□□□□ -0.77
CPSF7-217ENST00000537162 PRR11Q96HE9 360 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-217ENST00000537162 SENP8Q96LD8 212 aa10.22□□□□□ -0.77
CPSF7-217ENST00000537162 ELF4Q99607 663 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-217ENST00000537162 TRIM9Q9C026 710 aa10.22□□□□□ -0.77
CPSF7-217ENST00000537162 WDR70Q9NW82 654 aa10.22□□□□□ -0.77
CPSF7-217ENST00000537162 SMPD4Q9NXE4 827 aa10.22□□□□□ -0.77
CPSF7-217ENST00000537162 SATB2Q9UPW6 733 aa10.22□□□□□ -0.77
CPSF7-217ENST00000537162 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-217ENST00000537162 ARID1BQ8NFD5 2236 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-217ENST00000537162 GOLGA8AA7E2F4 631 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 GOLGA8BA8MQT2 603 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 ZBTB43O43298 467 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 CSO75390 466 aaKnown RBP10.21□□□□□ -0.77
CPSF7-217ENST00000537162 ADH1CP00326 375 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 WNT1P04628 370 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 SFTPCP11686 197 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 ABCB4P21439 1286 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 ACP1P24666 158 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 ACSL1P33121 698 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 CASRP41180 1078 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 C3orf38Q5JPI3 329 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 SDE2Q6IQ49 451 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 SYNE3Q6ZMZ3 975 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 DEPTORQ8TB45 409 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 BICD2Q8TD16 824 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 BIRC7Q96CA5 298 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 SGF29Q96ES7 293 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 TRMT2BQ96GJ1 504 aaKnown RBP10.21□□□□□ -0.77
CPSF7-217ENST00000537162 MYRFLQ96LU7 910 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 TCEANC2Q96MN5 208 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 SLC46A1Q96NT5 459 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 ACO2Q99798 780 aaKnown RBP10.21□□□□□ -0.77
CPSF7-217ENST00000537162 EIF2AK1Q9BQI3 630 aaKnown RBP10.21□□□□□ -0.77
CPSF7-217ENST00000537162 OSGEPQ9NPF4 335 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 TMPRSS4Q9NRS4 437 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 CFAP97Q9P2B7 532 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 DEC1Q9P2X7 70 aa10.21□□□□□ -0.77
CPSF7-217ENST00000537162 VPS37CA5D8V6 355 aaPredicted RBP10.2□□□□□ -0.78
CPSF7-217ENST00000537162 PRPF40AO75400 957 aaKnown RBP10.2□□□□□ -0.78
CPSF7-217ENST00000537162 AGFG2O95081 481 aa10.2□□□□□ -0.78
CPSF7-217ENST00000537162 LYPLA2O95372 231 aa10.2□□□□□ -0.78
CPSF7-217ENST00000537162 IGLV3-19P01714 112 aa10.2□□□□□ -0.78
CPSF7-217ENST00000537162 HARSP12081 509 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms