RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 ADAM2Q99965 735 aa23.75■■□□□ 1.39
HMGA2-206ENST00000536545 NCAPGQ9BPX3 1015 aa23.75■■□□□ 1.39
HMGA2-206ENST00000536545 LRRC4CQ9HCJ2 640 aa23.75■■□□□ 1.39
HMGA2-206ENST00000536545 NGRNQ9NPE2 291 aaKnown RBP23.75■■□□□ 1.39
HMGA2-206ENST00000536545 CRTAC1Q9NQ79 661 aa23.75■■□□□ 1.39
HMGA2-206ENST00000536545 DDX43Q9NXZ2 648 aaKnown RBP23.75■■□□□ 1.39
HMGA2-206ENST00000536545 APOC4-APOC2K7ER74 178 aa23.74■■□□□ 1.39
HMGA2-206ENST00000536545 RIPK2O43353 540 aa23.74■■□□□ 1.39
HMGA2-206ENST00000536545 APOC2P02655 101 aa23.74■■□□□ 1.39
HMGA2-206ENST00000536545 CDH6P55285 790 aa23.74■■□□□ 1.39
HMGA2-206ENST00000536545 HDAC4P56524 1084 aa23.74■■□□□ 1.39
HMGA2-206ENST00000536545 MDH1BQ5I0G3 518 aa23.74■■□□□ 1.39
HMGA2-206ENST00000536545 HIBCHQ6NVY1 386 aaPredicted RBP23.74■■□□□ 1.39
HMGA2-206ENST00000536545 ZNF771Q7L3S4 317 aaPredicted RBP23.74■■□□□ 1.39
HMGA2-206ENST00000536545 PIGZQ86VD9 579 aa23.74■■□□□ 1.39
HMGA2-206ENST00000536545 PKNOX2Q96KN3 472 aa23.74■■□□□ 1.39
HMGA2-206ENST00000536545 CALN1Q9BXU9 219 aa23.74■■□□□ 1.39
HMGA2-206ENST00000536545 PCDH9Q9HC56 1237 aa23.74■■□□□ 1.39
HMGA2-206ENST00000536545 CLDN5O00501 218 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 SHOX2O60902 331 aaPredicted RBP23.73■■□□□ 1.39
HMGA2-206ENST00000536545 GNRH1P01148 92 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 SHBGP04278 402 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 LHX1P48742 406 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 PLCB3Q01970 1234 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 P3H1Q32P28 736 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 BOLA3Q53S33 107 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 AGBL2Q5U5Z8 902 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 TRAF7Q6Q0C0 670 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 TRMT10CQ7L0Y3 403 aaKnown RBP23.73■■□□□ 1.39
HMGA2-206ENST00000536545 CCDC25Q86WR0 208 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 CENPIQ92674 756 aaPredicted RBP23.73■■□□□ 1.39
HMGA2-206ENST00000536545 SYT15Q9BQS2 421 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 PAAF1Q9BRP4 392 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 TSEN34Q9BSV6 310 aaKnown RBP23.73■■□□□ 1.39
HMGA2-206ENST00000536545 TSPYL1Q9H0U9 437 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 SAE1Q9UBE0 346 aaPredicted RBP23.73■■□□□ 1.39
HMGA2-206ENST00000536545 INHAP05111 366 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 ZSCAN5DPP0CG00 497 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 PECAM1P16284 738 aaPredicted RBP23.73■■□□□ 1.39
HMGA2-206ENST00000536545 DESP17661 470 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 TFE3P19532 575 aaPredicted RBP23.73■■□□□ 1.39
HMGA2-206ENST00000536545 SKOR1P84550 965 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 ADCY1Q08828 1119 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 GRIK3Q13003 919 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 MMRN1Q13201 1228 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 SLC29A2Q14542 456 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 PDK2Q15119 407 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 KRT71Q3SY84 523 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 EMC10Q5UCC4 262 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 VSIG1Q86XK7 387 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 RNF169Q8NCN4 708 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 PGBD4Q96DM1 585 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 GLT1D1Q96MS3 346 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 TMEM121Q9BTD3 319 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 SNRNP25Q9BV90 132 aaKnown RBP23.73■■□□□ 1.39
HMGA2-206ENST00000536545 ADAM33Q9BZ11 813 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 ADAM7Q9H2U9 754 aa23.73■■□□□ 1.39
HMGA2-206ENST00000536545 DNALI1O14645 258 aaPredicted RBP23.72■■□□□ 1.39
HMGA2-206ENST00000536545 MDM4O15151 490 aa23.72■■□□□ 1.39
HMGA2-206ENST00000536545 SKIP12755 728 aa23.72■■□□□ 1.39
HMGA2-206ENST00000536545 IFFO1Q0D2I5 559 aa23.72■■□□□ 1.39
HMGA2-206ENST00000536545 ADIGQ0VDE8 80 aa23.72■■□□□ 1.39
HMGA2-206ENST00000536545 LHX8Q68G74 356 aa23.72■■□□□ 1.39
HMGA2-206ENST00000536545 DSTYKQ6XUX3 929 aa23.72■■□□□ 1.39
HMGA2-206ENST00000536545 KDM7AQ6ZMT4 941 aa23.72■■□□□ 1.39
HMGA2-206ENST00000536545 CLEC20AQ6ZU45 233 aa23.72■■□□□ 1.39
HMGA2-206ENST00000536545 ZNF598Q86UK7 904 aaKnown RBP23.72■■□□□ 1.39
HMGA2-206ENST00000536545 SLC43A3Q8NBI5 491 aa23.72■■□□□ 1.39
HMGA2-206ENST00000536545 KCTD13Q8WZ19 329 aa23.72■■□□□ 1.39
HMGA2-206ENST00000536545 DDX23Q9BUQ8 820 aaKnown RBP23.72■■□□□ 1.39
HMGA2-206ENST00000536545 CDC42EP4Q9H3Q1 356 aaKnown RBP23.72■■□□□ 1.39
HMGA2-206ENST00000536545 INPPL1O15357 1258 aa23.71■■□□□ 1.39
HMGA2-206ENST00000536545 BEST1O76090 585 aa23.71■■□□□ 1.39
HMGA2-206ENST00000536545 CKBP12277 381 aa23.71■■□□□ 1.39
HMGA2-206ENST00000536545 ETS1P14921 441 aa23.71■■□□□ 1.39
HMGA2-206ENST00000536545 SLC8A3P57103 927 aa23.71■■□□□ 1.39
HMGA2-206ENST00000536545 TIGD5Q53EQ6 642 aa23.71■■□□□ 1.39
HMGA2-206ENST00000536545 HOOK3Q86VS8 718 aa23.71■■□□□ 1.39
HMGA2-206ENST00000536545 ECHDC2Q86YB7 292 aa23.71■■□□□ 1.39
HMGA2-206ENST00000536545 PCDH18Q9HCL0 1135 aa23.71■■□□□ 1.39
HMGA2-206ENST00000536545 UBN1Q9NPG3 1134 aa23.71■■□□□ 1.39
HMGA2-206ENST00000536545 KRT82Q9NSB4 513 aa23.71■■□□□ 1.39
HMGA2-206ENST00000536545 GPATCH2LQ9NWQ4 482 aa23.71■■□□□ 1.39
HMGA2-206ENST00000536545 TDRD15B5MCY1 1934 aaKnown RBP23.71■■□□□ 1.39
HMGA2-206ENST00000536545 DAB1O75553 588 aa23.7■■□□□ 1.39
HMGA2-206ENST00000536545 POMCP01189 267 aa23.7■■□□□ 1.39
HMGA2-206ENST00000536545 NR1D1P20393 614 aa23.7■■□□□ 1.39
HMGA2-206ENST00000536545 KRT81Q14533 505 aa23.7■■□□□ 1.39
HMGA2-206ENST00000536545 SCYL2Q6P3W7 929 aa23.7■■□□□ 1.39
HMGA2-206ENST00000536545 FAM35AQ86V20 835 aa23.7■■□□□ 1.39
HMGA2-206ENST00000536545 TMEM109Q9BVC6 243 aa23.7■■□□□ 1.39
HMGA2-206ENST00000536545 FOXP3Q9BZS1 431 aa23.7■■□□□ 1.39
HMGA2-206ENST00000536545 TRPV6Q9H1D0 765 aa23.7■■□□□ 1.39
HMGA2-206ENST00000536545 CENPHQ9H3R5 247 aa23.7■■□□□ 1.39
HMGA2-206ENST00000536545 TIMM13Q9Y5L4 95 aaPredicted RBP23.7■■□□□ 1.39
HMGA2-206ENST00000536545 A0A1W2PQ45 241 aaPredicted RBP23.7■■□□□ 1.38
HMGA2-206ENST00000536545 A0A1W2PQY0 241 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 ZNF487B1APH4 448 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 SGK1O00141 431 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 FAM200BP0CF97 657 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms