RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 KAZNQ674X7 775 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 SMYD5Q6GMV2 418 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 C1orf228Q6PIY5 440 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 SH3BP5LQ7L8J4 393 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 NIPA1Q7RTP0 329 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 MAVSQ7Z434 540 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 ANKRD23Q86SG2 305 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 RHPN2Q8IUC4 686 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 ARID3BQ8IVW6 561 aaPredicted RBP7.21□□□□□ -1.26
CPSF7-215ENST00000536145 ZFPM1Q8IX07 1006 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 BBS5Q8N3I7 341 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 CCDC33Q8N5R6 958 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 LZTR1Q8N653 840 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 SAMD3Q8N6K7 520 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 TMEM161BQ8NDZ6 487 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 ZFP28Q8NHY6 868 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 RIN3Q8TB24 985 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 DDI1Q8WTU0 396 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 TFB1MQ8WVM0 346 aaKnown RBP7.21□□□□□ -1.26
CPSF7-215ENST00000536145 SPIRE2Q8WWL2 714 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 PYDC1Q8WXC3 89 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 KCNN1Q92952 543 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 DCUN1D1Q96GG9 259 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 DNAJC1Q96KC8 554 aaKnown RBP7.21□□□□□ -1.26
CPSF7-215ENST00000536145 EBF4Q9BQW3 602 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 MXRA8Q9BRK3 442 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 SIKE1Q9BRV8 207 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 TMEM121Q9BTD3 319 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 PI4K2AQ9BTU6 479 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 DHX33Q9H6R0 707 aaKnown RBP7.21□□□□□ -1.26
CPSF7-215ENST00000536145 SUDS3Q9H7L9 328 aaPredicted RBP7.21□□□□□ -1.26
CPSF7-215ENST00000536145 NRDE2Q9H7Z3 1164 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.21□□□□□ -1.26
CPSF7-215ENST00000536145 SMYD2Q9NRG4 433 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 RGS17Q9UGC6 210 aaPredicted RBP7.21□□□□□ -1.26
CPSF7-215ENST00000536145 PRR12Q9ULL5 1215 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 RAB26Q9ULW5 256 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 TBX20Q9UMR3 447 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 SYNPO2Q9UMS6 1093 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 PSMD13Q9UNM6 376 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 EXOC7Q9UPT5 735 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 CHMP2BQ9UQN3 213 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 POMPQ9Y244 141 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 USTQ9Y2C2 406 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 ZBTB12Q9Y330 459 aaPredicted RBP7.21□□□□□ -1.26
CPSF7-215ENST00000536145 DTNAQ9Y4J8 743 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 MAD1L1Q9Y6D9 718 aa7.21□□□□□ -1.26
CPSF7-215ENST00000536145 KANSL1LA0AUZ9 987 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 HMX2A2RU54 273 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 MEI4A8MW99 385 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 CXorf49A8MYA2 514 aaPredicted RBP7.2□□□□□ -1.26
CPSF7-215ENST00000536145 KBTBD13C9JR72 458 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 GOLGA8SH3BPF8 625 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 GOLGA8MH3BSY2 632 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 I3L4J1 428 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 SGK1O00141 431 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 GPR25O00155 361 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 COPEO14579 308 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 SLC16A4O15374 487 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 ONECUT3O60422 494 aaPredicted RBP7.2□□□□□ -1.26
CPSF7-215ENST00000536145 SORBS2O94875 1100 aaKnown RBP7.2□□□□□ -1.26
CPSF7-215ENST00000536145 PGM3O95394 542 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 VNN1O95497 513 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 ITGBL1O95965 494 aaPredicted RBP7.2□□□□□ -1.26
CPSF7-215ENST00000536145 HLA-DRAP01903 254 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 PRKCGP05129 697 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 HLA-DOAP06340 250 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 P4HBP07237 508 aaKnown RBP7.2□□□□□ -1.26
CPSF7-215ENST00000536145 SNRPAP09012 282 aaKnown RBP7.2□□□□□ -1.26
CPSF7-215ENST00000536145 WEE2P0C1S8 567 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 MYL4P12829 197 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 KRT5P13647 590 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 IDO1P14902 403 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 RAG1P15918 1043 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 GARTP22102 1010 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 PCSK6P29122 969 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 CDH5P33151 784 aaPredicted RBP7.2□□□□□ -1.26
CPSF7-215ENST00000536145 CRHR1P34998 444 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 GJC1P36383 396 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 MAGEA6P43360 314 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 ALDH1A3P47895 512 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 NUMBP49757 651 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 ALDH18A1P54886 795 aaKnown RBP7.2□□□□□ -1.26
CPSF7-215ENST00000536145 AQP5P55064 265 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 WNT7BP56706 349 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 PSMC5P62195 406 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 RPL7AP62424 266 aaKnown RBP7.2□□□□□ -1.26
CPSF7-215ENST00000536145 IRX4P78413 519 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 OTUD4Q01804 1114 aaKnown RBP7.2□□□□□ -1.26
CPSF7-215ENST00000536145 PLCB3Q01970 1234 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 CNTN2Q02246 1040 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 SLC25A11Q02978 314 aaKnown RBP7.2□□□□□ -1.26
CPSF7-215ENST00000536145 KDSRQ06136 332 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 DCTN2Q13561 401 aaKnown RBP7.2□□□□□ -1.26
CPSF7-215ENST00000536145 CYLC2Q14093 348 aaPredicted RBP7.2□□□□□ -1.26
CPSF7-215ENST00000536145 ADGRE1Q14246 886 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 PSMD6Q15008 389 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 CHI3L2Q15782 390 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 KBTBD12Q3ZCT8 623 aa7.2□□□□□ -1.26
CPSF7-215ENST00000536145 ZACNQ401N2 412 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms