RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 ARL14EPQ8N8R7 260 aaPredicted RBP9.39□□□□□ -0.91
CHD4-204ENST00000535810 TTC8Q8TAM2 541 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 SMARCD1Q96GM5 515 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 TWNKQ96RR1 684 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 CYP2S1Q96SQ9 504 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 KCNK16Q96T55 309 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 TSG101Q99816 390 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 GTPBP4Q9BZE4 634 aaKnown RBP9.39□□□□□ -0.91
CHD4-204ENST00000535810 NIF3L1Q9GZT8 377 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 CHRDQ9H2X0 955 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 C8orf33Q9H7E9 229 aaPredicted RBP9.39□□□□□ -0.91
CHD4-204ENST00000535810 DMAP1Q9NPF5 467 aaPredicted RBP9.39□□□□□ -0.91
CHD4-204ENST00000535810 HPS4Q9NQG7 708 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 DLL3Q9NYJ7 618 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 EHD2Q9NZN4 543 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 TRPM5Q9NZQ8 1165 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 MAN1B1Q9UKM7 699 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 ARHGAP26Q9UNA1 814 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 ANAPC1Q9H1A4 1944 aa9.39□□□□□ -0.91
CHD4-204ENST00000535810 ZNF638Q14966 1978 aaKnown RBP9.38□□□□□ -0.91
CHD4-204ENST00000535810 TNFRSF10BO14763 440 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 PSMA7O14818 248 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 LAMTOR5O43504 91 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 OLFM2O95897 454 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 CHRNB1P11230 501 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 PFKLP17858 780 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 HDCP19113 662 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 BMP6P22004 513 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 PPP3CCP48454 512 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 PDE6CP51160 858 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 SLC5A3P53794 718 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 FKBP3Q00688 224 aaKnown RBP9.38□□□□□ -0.91
CHD4-204ENST00000535810 IFRD2Q12894 506 aaPredicted RBP9.38□□□□□ -0.91
CHD4-204ENST00000535810 MTF1Q14872 753 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 ITPRIPL2Q3MIP1 535 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 WDR44Q5JSH3 913 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 TRIM68Q6AZZ1 485 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 C12orf29Q8N999 325 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 CCDC150Q8NCX0 1101 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 SLC2A14Q8TDB8 520 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 SH3RF2Q8TEC5 729 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 WHAMMQ8TF30 809 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 SEMA4DQ92854 862 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 CHFRQ96EP1 664 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 SLITRK1Q96PX8 696 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 IER2Q9BTL4 223 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 MED10Q9BTT4 135 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 EBF3Q9H4W6 596 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 CYP3A43Q9HB55 503 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 PRMT8Q9NR22 394 aaPredicted RBP9.38□□□□□ -0.91
CHD4-204ENST00000535810 GKN1Q9NS71 199 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 FAM49BQ9NUQ9 324 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 RABGEF1Q9UJ41 708 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 FBXO4Q9UKT5 387 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 R4GN57 208 aa9.38□□□□□ -0.91
CHD4-204ENST00000535810 STX10O60499 249 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 CILPO75339 1184 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 AP1G2O75843 785 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 BEST1O76090 585 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 RTN3O95197 1032 aaPredicted RBP9.37□□□□□ -0.91
CHD4-204ENST00000535810 OAS1P00973 400 aaKnown RBP9.37□□□□□ -0.91
CHD4-204ENST00000535810 LMNAP02545 664 aaKnown RBP9.37□□□□□ -0.91
CHD4-204ENST00000535810 ARSAP15289 507 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 TCF3P15923 654 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 CD58P19256 250 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 YWHAQP27348 245 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 SLC7A9P82251 487 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 ZXDBP98169 803 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 STIM1Q13586 685 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 RUNX3Q13761 415 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 CCINQ13939 588 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 LRRC32Q14392 662 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 PDGFRLQ15198 375 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 ZNF528Q3MIS6 628 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 CBWD6Q4V339 395 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 DCAF17Q5H9S7 520 aaPredicted RBP9.37□□□□□ -0.91
CHD4-204ENST00000535810 CBWD3Q5JTY5 395 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 CBWD5Q5RIA9 395 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 ISM2Q6H9L7 571 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 CC2D1AQ6P1N0 951 aaPredicted RBP9.37□□□□□ -0.91
CHD4-204ENST00000535810 ZC3H14Q6PJT7 736 aaKnown RBP9.37□□□□□ -0.91
CHD4-204ENST00000535810 NUP93Q8N1F7 819 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 FBXL13Q8NEE6 735 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 TTC16Q8NEE8 873 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 ZMIZ2Q8NF64 920 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 SCAMP5Q8TAC9 235 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 OSCP1Q8WVF1 389 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 FBXO32Q969P5 355 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 SLC35C1Q96A29 364 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 DHTKD1Q96HY7 919 aaPredicted RBP9.37□□□□□ -0.91
CHD4-204ENST00000535810 SMOQ99835 787 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 ARID3AQ99856 593 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 NT5C1AQ9BXI3 368 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 LMAN1LQ9HAT1 526 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 CSNK1G1Q9HCP0 422 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 RBM12Q9NTZ6 932 aaKnown RBP9.37□□□□□ -0.91
CHD4-204ENST00000535810 RAB20Q9NX57 234 aa9.37□□□□□ -0.91
CHD4-204ENST00000535810 DUS2Q9NX74 493 aaKnown RBP9.37□□□□□ -0.91
CHD4-204ENST00000535810 ARMCX3Q9UH62 379 aaPredicted RBP9.37□□□□□ -0.91
CHD4-204ENST00000535810 VPS9D1Q9Y2B5 631 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms