RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 BRCC3P46736 316 aa19.12■□□□□ 0.65
HTATSF1-204ENST00000535601 SEC24CP53992 1094 aa19.12■□□□□ 0.65
HTATSF1-204ENST00000535601 VCPP55072 806 aaKnown RBP19.12■□□□□ 0.65
HTATSF1-204ENST00000535601 LRIG3Q6UXM1 1119 aa19.12■□□□□ 0.65
HTATSF1-204ENST00000535601 PIGZQ86VD9 579 aa19.12■□□□□ 0.65
HTATSF1-204ENST00000535601 PYROXD2Q8N2H3 581 aa19.12■□□□□ 0.65
HTATSF1-204ENST00000535601 ALLCQ8N6M5 410 aa19.12■□□□□ 0.65
HTATSF1-204ENST00000535601 ADAM32Q8TC27 787 aa19.12■□□□□ 0.65
HTATSF1-204ENST00000535601 FNIP1Q8TF40 1166 aa19.12■□□□□ 0.65
HTATSF1-204ENST00000535601 MRPL42Q9Y6G3 142 aaKnown RBP19.12■□□□□ 0.65
HTATSF1-204ENST00000535601 F5H423 210 aaPredicted RBP19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 SDC4P31431 198 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 HDAC4P56524 1084 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 MAP3K7CLP57077 242 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 SV2CQ496J9 727 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 ANKRD22Q5VYY1 191 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 DDX43Q9NXZ2 648 aaKnown RBP19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 TBK1Q9UHD2 729 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 MYBPHLA2RUH7 354 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 ITGB1P05556 798 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 ITIH2P19823 946 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 ACTN2P35609 894 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 KRT81Q14533 505 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 HFE2Q6ZVN8 426 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 PAQR9Q6ZVX9 377 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 TMEM110Q86TL2 294 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 ADAM2Q99965 735 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 SNRNP25Q9BV90 132 aaKnown RBP19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 PSD3Q9NYI0 1048 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 TCRBV7S3A2A0A539 114 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 THP07101 528 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 BST2Q10589 180 aaKnown RBP19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 IRF5Q13568 498 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 DPYSL3Q14195 570 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 POLNQ7Z5Q5 900 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 RSPH3Q86UC2 560 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 ANKRD52Q8NB46 1076 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 FAXDC2Q96IV6 333 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 RUNDC3BQ96NL0 473 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 TRAIPQ9BWF2 469 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 CRTAC1Q9NQ79 661 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 KIAA1257Q9ULG3 409 aa19.11■□□□□ 0.65
HTATSF1-204ENST00000535601 RARGP13631 454 aa19.1■□□□□ 0.65
HTATSF1-204ENST00000535601 CREB1P16220 341 aa19.1■□□□□ 0.65
HTATSF1-204ENST00000535601 LPIN1Q14693 890 aa19.1■□□□□ 0.65
HTATSF1-204ENST00000535601 LEKR1Q6ZMV7 388 aa19.1■□□□□ 0.65
HTATSF1-204ENST00000535601 FAM131BQ86XD5 332 aa19.1■□□□□ 0.65
HTATSF1-204ENST00000535601 CCDC185Q8N715 623 aa19.1■□□□□ 0.65
HTATSF1-204ENST00000535601 SPATA18Q8TC71 538 aa19.1■□□□□ 0.65
HTATSF1-204ENST00000535601 GDAP2Q9NXN4 497 aa19.1■□□□□ 0.65
HTATSF1-204ENST00000535601 MGAT3Q09327 533 aa19.1■□□□□ 0.65
HTATSF1-204ENST00000535601 ITGA7Q13683 1181 aa19.1■□□□□ 0.65
HTATSF1-204ENST00000535601 PCBP1Q15365 356 aaKnown RBP eCLIP19.1■□□□□ 0.65
HTATSF1-204ENST00000535601 GPRIN1Q7Z2K8 1008 aa19.1■□□□□ 0.65
HTATSF1-204ENST00000535601 UNC93AQ86WB7 457 aa19.1■□□□□ 0.65
HTATSF1-204ENST00000535601 ANKMY2Q8IV38 441 aa19.1■□□□□ 0.65
HTATSF1-204ENST00000535601 CCDC89Q8N998 374 aa19.1■□□□□ 0.65
HTATSF1-204ENST00000535601 STKLD1Q8NE28 680 aa19.1■□□□□ 0.65
HTATSF1-204ENST00000535601 CMASQ8NFW8 434 aaPredicted RBP19.1■□□□□ 0.65
HTATSF1-204ENST00000535601 PTPN1P18031 435 aaKnown RBP19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 BCAT1P54687 386 aa19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 EIF3EP60228 445 aaKnown RBP19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 FAXCQ5TGI0 409 aa19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 DSTYKQ6XUX3 929 aa19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 TET1Q8NFU7 2136 aa19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 TBCBQ99426 244 aa19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 UPF3AQ9H1J1 476 aaKnown RBP19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 SAYSD1Q9NPB0 183 aa19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 PPANQ9NQ55 473 aaKnown RBP19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 KRT82Q9NSB4 513 aa19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 NINJ2Q9NZG7 142 aa19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 HMGB1P1B2RPK0 211 aaPredicted RBP19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 XPOTO43592 962 aaKnown RBP19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 IL4RP24394 825 aa19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 CRYBG2Q8N1P7 616 aa19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 SLC35B2Q8TB61 432 aa19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 TMEM209Q96SK2 561 aa19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 RBM15Q96T37 977 aaKnown RBP eCLIP19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 DHX35Q9H5Z1 703 aaKnown RBP19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 TDRD15B5MCY1 1934 aaKnown RBP19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 RBP3P10745 1247 aa19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 GSCP56915 257 aaPredicted RBP19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 TIGD5Q53EQ6 642 aa19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 BBS12Q6ZW61 710 aa19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 SMC1BQ8NDV3 1235 aa19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 SELENOSQ9BQE4 189 aa19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 MAK16Q9BXY0 300 aaKnown RBP19.09■□□□□ 0.65
HTATSF1-204ENST00000535601 NUP205Q92621 2012 aa19.08■□□□□ 0.65
HTATSF1-204ENST00000535601 DCAF8L1A6NGE4 600 aa19.08■□□□□ 0.65
HTATSF1-204ENST00000535601 B4GALT3O60512 393 aa19.08■□□□□ 0.65
HTATSF1-204ENST00000535601 B3GAT3O94766 335 aa19.08■□□□□ 0.65
HTATSF1-204ENST00000535601 IFRD2Q12894 506 aaPredicted RBP19.08■□□□□ 0.65
HTATSF1-204ENST00000535601 DCAF6Q58WW2 860 aa19.08■□□□□ 0.65
HTATSF1-204ENST00000535601 CCSAPQ6IQ19 270 aaPredicted RBP19.08■□□□□ 0.65
HTATSF1-204ENST00000535601 MLXIPLQ9NP71 852 aa19.08■□□□□ 0.65
HTATSF1-204ENST00000535601 HOMER3Q9NSC5 361 aa19.08■□□□□ 0.65
HTATSF1-204ENST00000535601 TMEM51Q9NW97 253 aa19.08■□□□□ 0.65
HTATSF1-204ENST00000535601 FEZ2Q9UHY8 353 aaPredicted RBP19.08■□□□□ 0.65
HTATSF1-204ENST00000535601 COPS2P61201 443 aa19.08■□□□□ 0.64
HTATSF1-204ENST00000535601 ARHGAP17Q68EM7 881 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms