RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 CORO2BQ9UQ03 480 aa6.15□□□□□ -1.42
PRKDC-205ENST00000535375 PCSK5Q92824 1860 aa6.15□□□□□ -1.43
PRKDC-205ENST00000535375 SNX2O60749 519 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 MT-ND5P03915 603 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 CDK4P11802 303 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 HGFP14210 728 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 IL1R1P14778 569 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 BTF3P20290 206 aaKnown RBP6.14□□□□□ -1.43
PRKDC-205ENST00000535375 IL1R2P27930 398 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 GKP32189 559 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 ABCG1P45844 678 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 TIRAPP58753 221 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 CYP1B1Q16678 543 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 ZNF750Q32MQ0 723 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 ZKSCAN2Q63HK3 967 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 CYB5RLQ6IPT4 315 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 MZT2AQ6P582 158 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 SRRM1Q8IYB3 904 aaKnown RBP6.14□□□□□ -1.43
PRKDC-205ENST00000535375 KRT78Q8N1N4 520 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 PNLDC1Q8NA58 520 aaKnown RBP6.14□□□□□ -1.43
PRKDC-205ENST00000535375 NGDNQ8NEJ9 315 aaKnown RBP6.14□□□□□ -1.43
PRKDC-205ENST00000535375 DDB2Q92466 427 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 ZNF668Q96K58 619 aaPredicted RBP6.14□□□□□ -1.43
PRKDC-205ENST00000535375 MACROD1Q9BQ69 325 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 VN1R3Q9BXE9 311 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 ZCWPW1Q9H0M4 648 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 TBC1D23Q9NUY8 699 aa6.14□□□□□ -1.43
PRKDC-205ENST00000535375 THAP12O43422 761 aa6.13□□□□□ -1.43
PRKDC-205ENST00000535375 PMPCBO75439 489 aa6.13□□□□□ -1.43
PRKDC-205ENST00000535375 CD19P15391 556 aa6.13□□□□□ -1.43
PRKDC-205ENST00000535375 TFF2Q03403 129 aa6.13□□□□□ -1.43
PRKDC-205ENST00000535375 SRSF7Q16629 238 aaKnown RBP eCLIP6.13□□□□□ -1.43
PRKDC-205ENST00000535375 PROSER3Q2NL68 480 aa6.13□□□□□ -1.43
PRKDC-205ENST00000535375 CERKLQ49MI3 558 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-205ENST00000535375 COBLL1Q53SF7 1204 aa6.13□□□□□ -1.43
PRKDC-205ENST00000535375 PLAG1Q6DJT9 500 aa6.13□□□□□ -1.43
PRKDC-205ENST00000535375 FCRL6Q6DN72 434 aa6.13□□□□□ -1.43
PRKDC-205ENST00000535375 IQCDQ96DY2 449 aa6.13□□□□□ -1.43
PRKDC-205ENST00000535375 SNX18Q96RF0 628 aa6.13□□□□□ -1.43
PRKDC-205ENST00000535375 DDX21Q9NR30 783 aaKnown RBP eCLIP6.13□□□□□ -1.43
PRKDC-205ENST00000535375 SNX15Q9NRS6 342 aa6.13□□□□□ -1.43
PRKDC-205ENST00000535375 FAM50BQ9Y247 325 aa6.13□□□□□ -1.43
PRKDC-205ENST00000535375 PRRT4C9JH25 899 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 UBE2Q2LH0YL09 131 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 H7C1Q1 480 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 M0R3H8 397 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 EXOC5O00471 708 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 IL18RAPO95256 599 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 FGAP02671 866 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 ANXA2P07355 339 aaKnown RBP6.12□□□□□ -1.43
PRKDC-205ENST00000535375 PARP1P09874 1014 aaKnown RBP6.12□□□□□ -1.43
PRKDC-205ENST00000535375 PHKG2P15735 406 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 CREB1P16220 341 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 TIAL1Q01085 375 aaKnown RBP eCLIP6.12□□□□□ -1.43
PRKDC-205ENST00000535375 DAG1Q14118 895 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 KIRREL2Q6UWL6 708 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 ZNF782Q6ZMW2 699 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-205ENST00000535375 PTCHD4Q6ZW05 846 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 SFTPA1Q8IWL2 248 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 KAT6AQ92794 2004 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 HIST1H2AAQ96QV6 131 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 THAP7Q9BT49 309 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-205ENST00000535375 TRIM36Q9NQ86 728 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 FLRT1Q9NZU1 646 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 MGAT4CQ9UBM8 478 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 DKK4Q9UBT3 224 aa6.12□□□□□ -1.43
PRKDC-205ENST00000535375 RGS17Q9UGC6 210 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-205ENST00000535375 POC1B-GALNT4F8VUJ3 575 aa6.11□□□□□ -1.43
PRKDC-205ENST00000535375 F8W8V4 182 aa6.11□□□□□ -1.43
PRKDC-205ENST00000535375 CYP2D6P10635 497 aa6.11□□□□□ -1.43
PRKDC-205ENST00000535375 FPR3P25089 353 aa6.11□□□□□ -1.43
PRKDC-205ENST00000535375 CERS1P27544 350 aa6.11□□□□□ -1.43
PRKDC-205ENST00000535375 PIK3CBP42338 1070 aa6.11□□□□□ -1.43
PRKDC-205ENST00000535375 ALDH5A1P51649 535 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-205ENST00000535375 FOXF2Q12947 444 aa6.11□□□□□ -1.43
PRKDC-205ENST00000535375 KCNAB1Q14722 419 aa6.11□□□□□ -1.43
PRKDC-205ENST00000535375 EZH2Q15910 746 aaKnown RBP6.11□□□□□ -1.43
PRKDC-205ENST00000535375 CHSY1Q86X52 802 aa6.11□□□□□ -1.43
PRKDC-205ENST00000535375 GALNT4Q8N4A0 578 aa6.11□□□□□ -1.43
PRKDC-205ENST00000535375 CCDC33Q8N5R6 958 aa6.11□□□□□ -1.43
PRKDC-205ENST00000535375 CCDC17Q96LX7 622 aa6.11□□□□□ -1.43
PRKDC-205ENST00000535375 ASB2Q96Q27 587 aa6.11□□□□□ -1.43
PRKDC-205ENST00000535375 DNAJB11Q9UBS4 358 aa6.11□□□□□ -1.43
PRKDC-205ENST00000535375 NKX1-2Q9UD57 310 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-205ENST00000535375 WIPF3A6NGB9 483 aa6.1□□□□□ -1.43
PRKDC-205ENST00000535375 TISP43B9A030 160 aa6.1□□□□□ -1.43
PRKDC-205ENST00000535375 GCATO75600 419 aa6.1□□□□□ -1.43
PRKDC-205ENST00000535375 CELA2AP08217 269 aa6.1□□□□□ -1.43
PRKDC-205ENST00000535375 RENBPP51606 427 aa6.1□□□□□ -1.43
PRKDC-205ENST00000535375 COPB1P53618 953 aaKnown RBP6.1□□□□□ -1.43
PRKDC-205ENST00000535375 IFIT5Q13325 482 aaKnown RBP6.1□□□□□ -1.43
PRKDC-205ENST00000535375 HLTFQ14527 1009 aaKnown RBP eCLIP6.1□□□□□ -1.43
PRKDC-205ENST00000535375 SAFBQ15424 915 aaKnown RBP eCLIP6.1□□□□□ -1.43
PRKDC-205ENST00000535375 RNASE12Q5GAN4 147 aaKnown RBP6.1□□□□□ -1.43
PRKDC-205ENST00000535375 TMEM63BQ5T3F8 832 aa6.1□□□□□ -1.43
PRKDC-205ENST00000535375 C11orf44Q8N8P7 122 aa6.1□□□□□ -1.43
PRKDC-205ENST00000535375 VPS50Q96JG6 964 aa6.1□□□□□ -1.43
PRKDC-205ENST00000535375 FYTTD1Q96QD9 318 aaKnown RBP6.1□□□□□ -1.43
PRKDC-205ENST00000535375 MMS19Q96T76 1030 aa6.1□□□□□ -1.43
PRKDC-205ENST00000535375 SARGQ9BW04 601 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms