RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 NDST1P52848 882 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 PNOCQ13519 176 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 LPAL2Q16609 132 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 NFIL3Q16649 462 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 EML3Q32P44 896 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 TMEM196Q5HYL7 178 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 C1orf220Q5T0J3 134 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 NAIF1Q69YI7 327 aaPredicted RBP9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 PKN3Q6P5Z2 889 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 PRR23BQ6ZRT6 265 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 INTS8Q75QN2 995 aaKnown RBP9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 SMYD4Q8IYR2 804 aaPredicted RBP9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 NUP93Q8N1F7 819 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 GUF1Q8N442 669 aaKnown RBP9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 ZNF397Q8NF99 534 aaPredicted RBP9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 TAF4BQ92750 862 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 SECISBP2LQ93073 1101 aaKnown RBP9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 ATP2A3Q93084 1043 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 FBXO32Q969P5 355 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 SMARCD1Q96GM5 515 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 KCNK16Q96T55 309 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 P2RY13Q9BPV8 354 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 IMPG2Q9BZV3 1241 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 DMAP1Q9NPF5 467 aaPredicted RBP9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 KRT82Q9NSB4 513 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 FAM49BQ9NUQ9 324 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 C2orf42Q9NWW7 574 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 SMPD4Q9NXE4 827 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 TMEM63CQ9P1W3 806 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 HMGXB4Q9UGU5 601 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 GMEB2Q9UKD1 530 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 RAB23Q9ULC3 237 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 CPQQ9Y646 472 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 DMDP11532 3685 aa9.06□□□□□ -0.96
SFSWAP-202ENST00000535202 PTPRZ1P23471 2315 aaPredicted RBP9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 K7ESF4 209 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 SCAMP3O14828 347 aaKnown RBP9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 RNF40O75150 1001 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 AP1G2O75843 785 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 PAPSS2O95340 614 aaPredicted RBP9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 NFATC1O95644 943 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 ASS1P00966 412 aaKnown RBP9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 OAS1P00973 400 aaKnown RBP9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 TCF3P15923 654 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 TRIM21P19474 475 aaKnown RBP9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 DRD1P21728 446 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 ADORA2BP29275 332 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 HOXC13P31276 330 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 PSMC2P35998 433 aaKnown RBP9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 ASPAP45381 313 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 GALK1P51570 392 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 SLC5A3P53794 718 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 SLC7A9P82251 487 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 ZXDBP98169 803 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 PPP3CAQ08209 521 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 NR1H3Q13133 447 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 SRSF5Q13243 272 aaKnown RBP9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 ADAM9Q13443 819 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 PAQR9Q6ZVX9 377 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 LONP2Q86WA8 852 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 UNC93AQ86WB7 457 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 FUKQ8N0W3 1084 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 PDZD8Q8NEN9 1154 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 SCAMP5Q8TAC9 235 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 SLC2A14Q8TDB8 520 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 TAS1R2Q8TE23 839 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 CD101Q93033 1021 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 EXOC4Q96A65 974 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 ARID3AQ99856 593 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 RNF38Q9H0F5 515 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 LINC00597Q9H2U6 94 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 APOBEC3GQ9HC16 384 aaKnown RBP9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 FBRSL1Q9HCM7 1045 aaKnown RBP9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 RMND1Q9NWS8 449 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 FEZ2Q9UHY8 353 aaPredicted RBP9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 VPS13AQ96RL7 3174 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 KIAA1549LQ6ZVL6 1849 aa9.05□□□□□ -0.96
SFSWAP-202ENST00000535202 SYCE3A1L190 88 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 HRO43593 1189 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 ATG13O75143 517 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 BEST1O76090 585 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 OLFM2O95897 454 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 EPB41P11171 864 aaKnown RBP9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 CD58P19256 250 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 PXNP49023 591 aaPredicted RBP9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 MAP3K7CLP57077 242 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 SIM2Q14190 667 aaPredicted RBP9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 EDRF1Q3B7T1 1238 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 ZCWPW2Q504Y3 356 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 CEP68Q76N32 757 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 FILIP1Q7Z7B0 1213 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 FMR1NBQ8N0W7 255 aaPredicted RBP9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 C12orf29Q8N999 325 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 CCDC150Q8NCX0 1101 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 RPLP0P6Q8NHW5 317 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 OVCA2Q8WZ82 227 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 JAKMIP2Q96AA8 810 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 RMDN1Q96DB5 314 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 EEF2KMTQ96G04 330 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 TWNKQ96RR1 684 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms