RNA–Protein interactions for RNA: ENST00000535140.1

OTUB1-205, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 3

Gene OTUB1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-205ENST00000535140 MED10Q9BTT4 135 aa19.62■□□□□ 0.73
OTUB1-205ENST00000535140 SLC39A2Q9NP94 309 aa19.62■□□□□ 0.73
OTUB1-205ENST00000535140 ARHGEF4Q9NR80 690 aa19.62■□□□□ 0.73
OTUB1-205ENST00000535140 MYOFQ9NZM1 2061 aa19.61■□□□□ 0.73
OTUB1-205ENST00000535140 SGK1O00141 431 aa19.61■□□□□ 0.73
OTUB1-205ENST00000535140 POLR2DO15514 142 aaKnown RBP19.61■□□□□ 0.73
OTUB1-205ENST00000535140 EXOC3O60645 756 aa19.61■□□□□ 0.73
OTUB1-205ENST00000535140 YEATS4O95619 227 aa19.61■□□□□ 0.73
OTUB1-205ENST00000535140 STAU1O95793 577 aaKnown RBP19.61■□□□□ 0.73
OTUB1-205ENST00000535140 ADH1CP00326 375 aa19.61■□□□□ 0.73
OTUB1-205ENST00000535140 APODP05090 189 aa19.61■□□□□ 0.73
OTUB1-205ENST00000535140 FAM163BP0C2L3 166 aa19.61■□□□□ 0.73
OTUB1-205ENST00000535140 ADH5P11766 374 aa19.61■□□□□ 0.73
OTUB1-205ENST00000535140 NOVA1P51513 510 aaKnown RBP19.61■□□□□ 0.73
OTUB1-205ENST00000535140 CDH8P55286 799 aa19.61■□□□□ 0.73
OTUB1-205ENST00000535140 EMC10Q5UCC4 262 aa19.61■□□□□ 0.73
OTUB1-205ENST00000535140 FAM35AQ86V20 835 aa19.61■□□□□ 0.73
OTUB1-205ENST00000535140 DDX42Q86XP3 938 aaKnown RBP eCLIP19.61■□□□□ 0.73
OTUB1-205ENST00000535140 IL17RCQ8NAC3 791 aa19.61■□□□□ 0.73
OTUB1-205ENST00000535140 PLEKHO2Q8TD55 490 aa19.61■□□□□ 0.73
OTUB1-205ENST00000535140 RLN3Q8WXF3 142 aa19.61■□□□□ 0.73
OTUB1-205ENST00000535140 ATP8B3O60423 1300 aa19.6■□□□□ 0.73
OTUB1-205ENST00000535140 GIPC1O14908 333 aa19.6■□□□□ 0.73
OTUB1-205ENST00000535140 KHNYNO15037 678 aaKnown RBP19.6■□□□□ 0.73
OTUB1-205ENST00000535140 COCHO43405 550 aa19.6■□□□□ 0.73
OTUB1-205ENST00000535140 ALDH1A2O94788 518 aa19.6■□□□□ 0.73
OTUB1-205ENST00000535140 RTN3O95197 1032 aaPredicted RBP19.6■□□□□ 0.73
OTUB1-205ENST00000535140 ATICP31939 592 aa19.6■□□□□ 0.73
OTUB1-205ENST00000535140 EIF2DP41214 584 aaKnown RBP19.6■□□□□ 0.73
OTUB1-205ENST00000535140 AFMP43652 599 aa19.6■□□□□ 0.73
OTUB1-205ENST00000535140 SNRPFP62306 86 aaKnown RBP19.6■□□□□ 0.73
OTUB1-205ENST00000535140 ZNF699Q32M78 642 aa19.6■□□□□ 0.73
OTUB1-205ENST00000535140 LY6G5CQ5SRR4 150 aa19.6■□□□□ 0.73
OTUB1-205ENST00000535140 ARMCX6Q7L4S7 300 aa19.6■□□□□ 0.73
OTUB1-205ENST00000535140 KIAA1958Q8N8K9 716 aa19.6■□□□□ 0.73
OTUB1-205ENST00000535140 PDZD8Q8NEN9 1154 aa19.6■□□□□ 0.73
OTUB1-205ENST00000535140 SCAMP5Q8TAC9 235 aa19.6■□□□□ 0.73
OTUB1-205ENST00000535140 PIGKQ92643 395 aa19.6■□□□□ 0.73
OTUB1-205ENST00000535140 ZFRQ96KR1 1074 aaKnown RBP19.6■□□□□ 0.73
OTUB1-205ENST00000535140 CCSER2Q9H7U1 834 aa19.6■□□□□ 0.73
OTUB1-205ENST00000535140 MAGEF1Q9HAY2 307 aa19.6■□□□□ 0.73
OTUB1-205ENST00000535140 BCCIPQ9P287 314 aaKnown RBP eCLIP19.6■□□□□ 0.73
OTUB1-205ENST00000535140 TBC1D14Q9P2M4 693 aa19.6■□□□□ 0.73
OTUB1-205ENST00000535140 CHORDC1Q9UHD1 332 aaPredicted RBP19.6■□□□□ 0.73
OTUB1-205ENST00000535140 USP24Q9UPU5 2620 aa19.6■□□□□ 0.73
OTUB1-205ENST00000535140 CHRM1P11229 460 aaPredicted RBP19.59■□□□□ 0.73
OTUB1-205ENST00000535140 SLC5A3P53794 718 aa19.59■□□□□ 0.73
OTUB1-205ENST00000535140 SHC2P98077 582 aa19.59■□□□□ 0.73
OTUB1-205ENST00000535140 CUL4BQ13620 913 aa19.59■□□□□ 0.73
OTUB1-205ENST00000535140 BMT2Q1RMZ1 405 aa19.59■□□□□ 0.73
OTUB1-205ENST00000535140 ZNF667Q5HYK9 610 aa19.59■□□□□ 0.73
OTUB1-205ENST00000535140 DAB2IPQ5VWQ8 1189 aa19.59■□□□□ 0.73
OTUB1-205ENST00000535140 C12orf56Q8IXR9 622 aa19.59■□□□□ 0.73
OTUB1-205ENST00000535140 GRAMD1CQ8IYS0 662 aa19.59■□□□□ 0.73
OTUB1-205ENST00000535140 FRMD1Q8N878 549 aa19.59■□□□□ 0.73
OTUB1-205ENST00000535140 NAT16Q8N8M0 369 aa19.59■□□□□ 0.73
OTUB1-205ENST00000535140 OLIG1Q8TAK6 271 aa19.59■□□□□ 0.73
OTUB1-205ENST00000535140 HMGB4Q8WW32 186 aa19.59■□□□□ 0.73
OTUB1-205ENST00000535140 DMAP1Q9NPF5 467 aaPredicted RBP19.59■□□□□ 0.73
OTUB1-205ENST00000535140 KRT82Q9NSB4 513 aa19.59■□□□□ 0.73
OTUB1-205ENST00000535140 SH3BP1Q9Y3L3 701 aa19.59■□□□□ 0.73
OTUB1-205ENST00000535140 E2F8A0AVK6 867 aa19.58■□□□□ 0.72
OTUB1-205ENST00000535140 LRRIQ3A6PVS8 624 aaPredicted RBP19.58■□□□□ 0.72
OTUB1-205ENST00000535140 IRF1P10914 325 aa19.58■□□□□ 0.72
OTUB1-205ENST00000535140 GRIA2P42262 883 aa19.58■□□□□ 0.72
OTUB1-205ENST00000535140 KIR2DL1P43626 348 aaPredicted RBP19.58■□□□□ 0.72
OTUB1-205ENST00000535140 ORC1Q13415 861 aa19.58■□□□□ 0.72
OTUB1-205ENST00000535140 NCOA4Q13772 614 aa19.58■□□□□ 0.72
OTUB1-205ENST00000535140 KNOP1Q1ED39 458 aaKnown RBP19.58■□□□□ 0.72
OTUB1-205ENST00000535140 EOGTQ5NDL2 527 aa19.58■□□□□ 0.72
OTUB1-205ENST00000535140 HECTD3Q5T447 861 aa19.58■□□□□ 0.72
OTUB1-205ENST00000535140 PAQR9Q6ZVX9 377 aa19.58■□□□□ 0.72
OTUB1-205ENST00000535140 PGBD3Q8N328 593 aa19.58■□□□□ 0.72
OTUB1-205ENST00000535140 WHAMMQ8TF30 809 aa19.58■□□□□ 0.72
OTUB1-205ENST00000535140 OVCA2Q8WZ82 227 aa19.58■□□□□ 0.72
OTUB1-205ENST00000535140 SMARCD1Q96GM5 515 aa19.58■□□□□ 0.72
OTUB1-205ENST00000535140 SPACA7Q96KW9 195 aa19.58■□□□□ 0.72
OTUB1-205ENST00000535140 SDCBP2Q9H190 292 aa19.58■□□□□ 0.72
OTUB1-205ENST00000535140 POLMQ9NP87 494 aaPredicted RBP19.58■□□□□ 0.72
OTUB1-205ENST00000535140 TMEM9BQ9NQ34 198 aa19.58■□□□□ 0.72
OTUB1-205ENST00000535140 GMIPQ9P107 970 aa19.58■□□□□ 0.72
OTUB1-205ENST00000535140 CGNQ9P2M7 1197 aaKnown RBP19.58■□□□□ 0.72
OTUB1-205ENST00000535140 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.57■□□□□ 0.72
OTUB1-205ENST00000535140 TCRBV21S2A2A0A5A6 115 aa19.57■□□□□ 0.72
OTUB1-205ENST00000535140 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.57■□□□□ 0.72
OTUB1-205ENST00000535140 MAP3K13O43283 966 aa19.57■□□□□ 0.72
OTUB1-205ENST00000535140 ADAM23O75077 832 aa19.57■□□□□ 0.72
OTUB1-205ENST00000535140 P2RY2P41231 377 aa19.57■□□□□ 0.72
OTUB1-205ENST00000535140 IRX4P78413 519 aa19.57■□□□□ 0.72
OTUB1-205ENST00000535140 GAD2Q05329 585 aa19.57■□□□□ 0.72
OTUB1-205ENST00000535140 ZNF252P-AS1Q0IIN9 211 aa19.57■□□□□ 0.72
OTUB1-205ENST00000535140 HSF5Q4G112 596 aaPredicted RBP19.57■□□□□ 0.72
OTUB1-205ENST00000535140 SH3PXD2AQ5TCZ1 1133 aa19.57■□□□□ 0.72
OTUB1-205ENST00000535140 LPCAT2Q7L5N7 544 aa19.57■□□□□ 0.72
OTUB1-205ENST00000535140 ACOT1Q86TX2 421 aa19.57■□□□□ 0.72
OTUB1-205ENST00000535140 BBS7Q8IWZ6 715 aa19.57■□□□□ 0.72
OTUB1-205ENST00000535140 TMEFF1Q8IYR6 380 aa19.57■□□□□ 0.72
OTUB1-205ENST00000535140 PHTF2Q8N3S3 785 aa19.57■□□□□ 0.72
OTUB1-205ENST00000535140 WBP2Q969T9 261 aa19.57■□□□□ 0.72
OTUB1-205ENST00000535140 TNIP3Q96KP6 325 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms