RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SMOQ99835 787 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.95□□□□□ -0.34
SCARB1-204ENST00000535005 ISCUQ9H1K1 167 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 PNPLA8Q9NP80 782 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 CYLDQ9NQC7 956 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 KRT82Q9NSB4 513 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 GOLGA6AQ9NYA3 693 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 ABI2Q9NYB9 513 aaPredicted RBP12.95□□□□□ -0.34
SCARB1-204ENST00000535005 LMCD1Q9NZU5 365 aa12.95□□□□□ -0.34
SCARB1-204ENST00000535005 GOLGA6BA6NDN3 693 aa12.94□□□□□ -0.34
SCARB1-204ENST00000535005 XPO1O14980 1071 aaKnown RBP12.94□□□□□ -0.34
SCARB1-204ENST00000535005 RTN2O75298 545 aa12.94□□□□□ -0.34
SCARB1-204ENST00000535005 PRLRP16471 622 aa12.94□□□□□ -0.34
SCARB1-204ENST00000535005 CYP2F1P24903 491 aa12.94□□□□□ -0.34
SCARB1-204ENST00000535005 SSTR3P32745 418 aaPredicted RBP12.94□□□□□ -0.34
SCARB1-204ENST00000535005 TUFMP49411 452 aaKnown RBP12.94□□□□□ -0.34
SCARB1-204ENST00000535005 SKOR1P84550 965 aa12.94□□□□□ -0.34
SCARB1-204ENST00000535005 GFPT1Q06210 699 aaPredicted RBP12.94□□□□□ -0.34
SCARB1-204ENST00000535005 NNTQ13423 1086 aa12.94□□□□□ -0.34
SCARB1-204ENST00000535005 C10orf76Q5T2E6 689 aa12.94□□□□□ -0.34
SCARB1-204ENST00000535005 ALKBH5Q6P6C2 394 aaKnown RBP12.94□□□□□ -0.34
SCARB1-204ENST00000535005 RTL10Q7L3V2 364 aa12.94□□□□□ -0.34
SCARB1-204ENST00000535005 PHF13Q86YI8 300 aaPredicted RBP12.94□□□□□ -0.34
SCARB1-204ENST00000535005 PASD1Q8IV76 773 aa12.94□□□□□ -0.34
SCARB1-204ENST00000535005 ZMIZ2Q8NF64 920 aa12.94□□□□□ -0.34
SCARB1-204ENST00000535005 AENQ8WTP8 325 aaKnown RBP12.94□□□□□ -0.34
SCARB1-204ENST00000535005 KCTD13Q8WZ19 329 aa12.94□□□□□ -0.34
SCARB1-204ENST00000535005 SECISBP2LQ93073 1101 aaKnown RBP12.94□□□□□ -0.34
SCARB1-204ENST00000535005 HSFY1Q96LI6 401 aa12.94□□□□□ -0.34
SCARB1-204ENST00000535005 PGLYRP2Q96PD5 576 aa12.94□□□□□ -0.34
SCARB1-204ENST00000535005 SH3GL2Q99962 352 aa12.94□□□□□ -0.34
SCARB1-204ENST00000535005 CRISPLD1Q9H336 500 aa12.94□□□□□ -0.34
SCARB1-204ENST00000535005 DMAP1Q9NPF5 467 aaPredicted RBP12.94□□□□□ -0.34
SCARB1-204ENST00000535005 TMEM30AQ9NV96 361 aa12.94□□□□□ -0.34
SCARB1-204ENST00000535005 SEPT11Q9NVA2 429 aaKnown RBP12.94□□□□□ -0.34
SCARB1-204ENST00000535005 PCDHGC5Q9Y5F6 944 aa12.94□□□□□ -0.34
SCARB1-204ENST00000535005 RFXAPO00287 272 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 ZNF263O14978 683 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 EIF3HO15372 352 aaKnown RBP eCLIP12.93□□□□□ -0.341e-5■□□□□ 9.1
SCARB1-204ENST00000535005 TGM5O43548 720 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 BEST1O76090 585 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 IPO7O95373 1038 aaKnown RBP12.93□□□□□ -0.34
SCARB1-204ENST00000535005 MMP8P22894 467 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 KLRC2P26717 231 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 CA8P35219 290 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 IRAK1P51617 712 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 CACNA2D1P54289 1103 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 ADCY1Q08828 1119 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 DUSP4Q13115 394 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 CCDC122Q5T0U0 273 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 NAA35Q5VZE5 725 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 C1orf131Q8NDD1 294 aaKnown RBP12.93□□□□□ -0.34
SCARB1-204ENST00000535005 SLC22A17Q8WUG5 538 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 VCPIP1Q96JH7 1222 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 NOX5Q96PH1 765 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 SELENOOQ9BVL4 669 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 SLC4A5Q9BY07 1137 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 RHOBTB2Q9BYZ6 727 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 TTYH1Q9H313 450 aaPredicted RBP12.93□□□□□ -0.34
SCARB1-204ENST00000535005 CYTH4Q9UIA0 394 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 GGA2Q9UJY4 613 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 PTPRDP23468 1912 aa12.93□□□□□ -0.34
SCARB1-204ENST00000535005 HHLA1C9JL84 531 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 CLASP2O75122 1294 aaKnown RBP12.92□□□□□ -0.34
SCARB1-204ENST00000535005 SEC24AO95486 1093 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 POU3F3P20264 500 aaPredicted RBP12.92□□□□□ -0.34
SCARB1-204ENST00000535005 CLCN4P51793 760 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 GSCP56915 257 aaPredicted RBP12.92□□□□□ -0.34
SCARB1-204ENST00000535005 MAP3K7CLP57077 242 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 RPL10AP62906 217 aaKnown RBP12.92□□□□□ -0.34
SCARB1-204ENST00000535005 PDCLQ13371 301 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 PMF1Q6P1K2 205 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 EMBQ6PCB8 327 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 MICALCLQ6ZW33 695 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 TMEM110Q86TL2 294 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 PIGZQ86VD9 579 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 HDAC7Q8WUI4 952 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 CPA5Q8WXQ8 436 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 SPATA17Q96L03 361 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 KCNK16Q96T55 309 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 CAPS2Q9BXY5 557 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 TAS2R14Q9NYV8 317 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 FBXW11Q9UKB1 542 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 MYO7AQ13402 2215 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 F8VP50 259 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 SOX1O00570 391 aaPredicted RBP12.92□□□□□ -0.34
SCARB1-204ENST00000535005 GLUD1P00367 558 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 FTLP02792 175 aaPredicted RBP12.92□□□□□ -0.34
SCARB1-204ENST00000535005 ELF1P32519 619 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 GGCXP38435 758 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 GRIK1P39086 918 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 ACADSBP45954 432 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 NSFP46459 744 aaKnown RBP12.92□□□□□ -0.34
SCARB1-204ENST00000535005 GABRB2P47870 512 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 SNX16P57768 344 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 C1QBPQ07021 282 aaKnown RBP12.92□□□□□ -0.34
SCARB1-204ENST00000535005 PTP4A2Q12974 167 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 SPA17Q15506 151 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 RAB41Q5JT25 222 aa12.92□□□□□ -0.34
SCARB1-204ENST00000535005 YTHDF3Q7Z739 585 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms