RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 TMEM196Q5HYL7 178 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 TDRD10Q5VZ19 366 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 TRIM68Q6AZZ1 485 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 SCN4BQ8IWT1 228 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 GOLGA5Q8TBA6 731 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 CCDC127Q96BQ5 260 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 C8orf48Q96LL4 319 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 CYP2S1Q96SQ9 504 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 MMS19Q96T76 1030 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 TMEM30AQ9NV96 361 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 INVSQ9Y283 1065 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 ITPR1Q14643 2758 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 C2orf78A6NCI8 922 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 PDXKO00764 312 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 TRIM66O15016 1216 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 RNF40O75150 1001 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 RHOBTB3O94955 611 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 PTPN1P18031 435 aaKnown RBP10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 RDXP35241 583 aaKnown RBP10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 GRIK1P39086 918 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 NDUFA8P51970 172 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 CACNA2D1P54289 1103 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 USP46P62068 366 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 NOP14P78316 857 aaKnown RBP10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 KRT85P78386 507 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 NFIL3Q16649 462 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 MDH1BQ5I0G3 518 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 FSTL4Q6MZW2 842 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 DENND5BQ6ZUT9 1274 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 CYP2U1Q7Z449 544 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 ARL14EPQ8N8R7 260 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 FSIP1Q8NA03 581 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 OR6B3Q8NGW1 331 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 OSCP1Q8WVF1 389 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 SYAP1Q96A49 352 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 SPATA32Q96LK8 384 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 DPEP3Q9H4B8 488 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 EBF3Q9H4W6 596 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 EXOC1Q9NV70 894 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 TRAF3IP3Q9Y228 551 aa10.72□□□□□ -0.69
CLSTN3-203ENST00000534830 TRAV19A0A0A6YYK7 116 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 A0A1W2PQ27 194 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 A0A1W2PQ64 194 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 A0A1W2PQD8 194 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 ZNF840PA6NDX5 716 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 F8VP50 259 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 MAPK13O15264 365 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 APBB3O95704 486 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 OLFM2O95897 454 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 EGFP01133 1207 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 RPN1P04843 607 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 USP17L7P0C7H9 530 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 PRR29P0C7W0 189 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 ARSAP15289 507 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 SYKP43405 635 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 MAPK8P45983 427 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 DGKEP52429 567 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 CDH8P55286 799 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 TNNC1P63316 161 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 DLG4P78352 724 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 CYP27A1Q02318 531 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 DPYDQ12882 1025 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 TRPC3Q13507 836 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 MTF1Q14872 753 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 PDGFRLQ15198 375 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 EML3Q32P44 896 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 ZACNQ401N2 412 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 C1orf220Q5T0J3 134 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 IGSF10Q6WRI0 2623 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 PAQR9Q6ZVX9 377 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 CHCHD4Q8N4Q1 142 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 KIAA1958Q8N8K9 716 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 B3GALNT2Q8NCR0 500 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 TMC2Q8TDI7 906 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 PIGKQ92643 395 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 BBC3Q96PG8 261 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 B3GNT5Q9BYG0 378 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 SDCBP2Q9H190 292 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 SNX25Q9H3E2 840 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 FBRSL1Q9HCM7 1045 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 IL37Q9NZH6 218 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 ARHGAP26Q9UNA1 814 aa10.71□□□□□ -0.69
CLSTN3-203ENST00000534830 ASXL3Q9C0F0 2248 aa10.7□□□□□ -0.7
CLSTN3-203ENST00000534830 HELZ2Q9BYK8 2649 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-203ENST00000534830 CLDN5O00501 218 aa10.7□□□□□ -0.7
CLSTN3-203ENST00000534830 IKBKBO14920 756 aa10.7□□□□□ -0.7
CLSTN3-203ENST00000534830 OAS1P00973 400 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-203ENST00000534830 NR3C1P04150 777 aa10.7□□□□□ -0.7
CLSTN3-203ENST00000534830 HDCP19113 662 aa10.7□□□□□ -0.7
CLSTN3-203ENST00000534830 GJA4P35212 333 aa10.7□□□□□ -0.7
CLSTN3-203ENST00000534830 PPP3CCP48454 512 aa10.7□□□□□ -0.7
CLSTN3-203ENST00000534830 DHPSP49366 369 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-203ENST00000534830 GALK1P51570 392 aa10.7□□□□□ -0.7
CLSTN3-203ENST00000534830 SLC7A9P82251 487 aa10.7□□□□□ -0.7
CLSTN3-203ENST00000534830 SCAPQ12770 1279 aa10.7□□□□□ -0.7
CLSTN3-203ENST00000534830 NCOA4Q13772 614 aa10.7□□□□□ -0.7
CLSTN3-203ENST00000534830 PMS2CLQ68D20 193 aa10.7□□□□□ -0.7
CLSTN3-203ENST00000534830 RPLP0P6Q8NHW5 317 aa10.7□□□□□ -0.7
CLSTN3-203ENST00000534830 SH3RF2Q8TEC5 729 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms