RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 FUKQ8N0W3 1084 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 ARL14EPQ8N8R7 260 aaPredicted RBP11□□□□□ -0.65
CSDE1-217ENST00000534699 ZNF518BQ9C0D4 1074 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 RAB20Q9NX57 234 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 WDR35Q9P2L0 1181 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 NME7Q9Y5B8 376 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 LATS1O95835 1130 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 ZNF132P52740 706 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 LIMK1P53667 647 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 MARSP56192 900 aaKnown RBP11□□□□□ -0.65
CSDE1-217ENST00000534699 PDE4CQ08493 712 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 SPDYCQ5MJ68 293 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 GAB3Q8WWW8 586 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 DDX1Q92499 740 aaKnown RBP11□□□□□ -0.65
CSDE1-217ENST00000534699 RTKNQ9BST9 563 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 SDCBP2Q9H190 292 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 TRPC7Q9HCX4 862 aa11□□□□□ -0.65
CSDE1-217ENST00000534699 OLA1Q9NTK5 396 aaKnown RBP11□□□□□ -0.65
CSDE1-217ENST00000534699 LSM7Q9UK45 103 aaKnown RBP11□□□□□ -0.65
CSDE1-217ENST00000534699 LRRN2O75325 713 aa10.99□□□□□ -0.65
CSDE1-217ENST00000534699 APBB3O95704 486 aa10.99□□□□□ -0.65
CSDE1-217ENST00000534699 RALAP11233 206 aa10.99□□□□□ -0.65
CSDE1-217ENST00000534699 PLA2G4AP47712 749 aa10.99□□□□□ -0.65
CSDE1-217ENST00000534699 CT47A1Q5JQC4 288 aaPredicted RBP10.99□□□□□ -0.65
CSDE1-217ENST00000534699 DUSP16Q9BY84 665 aa10.99□□□□□ -0.65
CSDE1-217ENST00000534699 GTSE1Q9NYZ3 720 aa10.99□□□□□ -0.65
CSDE1-217ENST00000534699 USP3Q9Y6I4 520 aa10.99□□□□□ -0.65
CSDE1-217ENST00000534699 R4GN57 208 aa10.99□□□□□ -0.65
CSDE1-217ENST00000534699 EYSQ5T1H1 3165 aa10.99□□□□□ -0.65
CSDE1-217ENST00000534699 PAEPP09466 180 aa10.99□□□□□ -0.65
CSDE1-217ENST00000534699 GALK1P51570 392 aa10.99□□□□□ -0.65
CSDE1-217ENST00000534699 SLC5A3P53794 718 aa10.99□□□□□ -0.65
CSDE1-217ENST00000534699 FOXD4L6Q3SYB3 417 aaPredicted RBP10.99□□□□□ -0.65
CSDE1-217ENST00000534699 FOXD4L3Q6VB84 417 aaPredicted RBP10.99□□□□□ -0.65
CSDE1-217ENST00000534699 CACNA2D4Q7Z3S7 1137 aa10.99□□□□□ -0.65
CSDE1-217ENST00000534699 PNKPQ96T60 521 aa10.99□□□□□ -0.65
CSDE1-217ENST00000534699 ARMCX3Q9UH62 379 aaPredicted RBP10.99□□□□□ -0.65
CSDE1-217ENST00000534699 SH3BP1Q9Y3L3 701 aa10.99□□□□□ -0.65
CSDE1-217ENST00000534699 MYH10P35580 1976 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 ALDH1A2O94788 518 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 RHOBTB1O94844 696 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 APODP05090 189 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 MBL2P11226 248 aaPredicted RBP10.98□□□□□ -0.65
CSDE1-217ENST00000534699 ID4P47928 161 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 DLG4P78352 724 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 SATB1Q01826 763 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 EOGTQ5NDL2 527 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 ADGRG2Q8IZP9 1017 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 ZNF557Q8N988 423 aaPredicted RBP10.98□□□□□ -0.65
CSDE1-217ENST00000534699 CYFIP2Q96F07 1278 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 SMOQ99835 787 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 TRIM62Q9BVG3 475 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 DPEP3Q9H4B8 488 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 EBF3Q9H4W6 596 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 KRT82Q9NSB4 513 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 CCL26Q9Y258 94 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 CPQQ9Y646 472 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 EPN2O95208 641 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 CD72P21854 359 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 ATP5C1P36542 298 aaKnown RBP10.98□□□□□ -0.65
CSDE1-217ENST00000534699 GRIA2P42262 883 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 PRCPP42785 496 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 USP46P62068 366 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 PPP3CAQ08209 521 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 CSRP2Q16527 193 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 SDHAF4Q5VUM1 108 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 BTBD8Q5XKL5 378 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 TXNDC11Q6PKC3 985 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 ACOT1Q86TX2 421 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 TMEM176AQ96HP8 235 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 KLF16Q9BXK1 252 aaPredicted RBP10.98□□□□□ -0.65
CSDE1-217ENST00000534699 STARD13Q9Y3M8 1113 aa10.98□□□□□ -0.65
CSDE1-217ENST00000534699 C2orf78A6NCI8 922 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 HHLA1C9JL84 531 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 GFRA2O00451 464 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 SETSIPP0DME0 302 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 VDRP11473 427 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 ARSAP15289 507 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 COG7P83436 770 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 MTA1Q13330 715 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 DHCR24Q15392 516 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 RAB41Q5JT25 222 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 ENOSF1Q7L5Y1 443 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 ANKRD52Q8NB46 1076 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 SPRYD3Q8NCJ5 442 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 NETO1Q8TDF5 533 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 USP33Q8TEY7 942 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 KCTD13Q8WZ19 329 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 IRGQQ8WZA9 623 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 XPO6Q96QU8 1125 aaKnown RBP10.97□□□□□ -0.65
CSDE1-217ENST00000534699 SLC2A11Q9BYW1 496 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 DLL3Q9NYJ7 618 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 DNMT3LQ9UJW3 386 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 MMP17Q9ULZ9 603 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 DGKEP52429 567 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 KIF11P52732 1056 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 CDH8P55286 799 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 SIM2Q14190 667 aaPredicted RBP10.97□□□□□ -0.65
CSDE1-217ENST00000534699 GAS6Q14393 721 aa10.97□□□□□ -0.65
CSDE1-217ENST00000534699 CLEC20AQ6ZU45 233 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms