RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	AGAP9	Q5VTM2	703 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	MYO1H	Q8N1T3	1032 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PCYOX1L	Q8NBM8	494 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	IL25	Q9H293	177 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	WDR41	Q9HAD4	459 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	RPS6KL1	Q9Y6S9	549 aa		16.29	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TRIM66	O15016	1216 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TM4SF1	P30408	202 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	MAP2K2	P36507	400 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	NDST1	P52848	882 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ITGA8	P53708	1063 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	IRAK1BP1	Q5VVH5	260 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	DENND5B	Q6ZUT9	1274 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ZNF438	Q7Z4V0	828 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SLC13A5	Q86YT5	568 aa	Predicted RBP	16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	RXFP2	Q8WXD0	754 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	WNK4	Q96J92	1243 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	GLTPD2	A6NH11	291 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	IFRD1	O00458	451 aa	Predicted RBP	16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ADCY6	O43306	1168 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CTNNB1	P35222	781 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PTPN7	P35236	360 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	NCKAP1L	P55160	1127 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	INPP5A	Q14642	412 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	UROC1	Q96N76	676 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	NAT9	Q9BTE0	207 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	UBE2O	Q9C0C9	1292 aa	Known RBP	16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	FER1L4	A9Z1Z3	1794 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ZNF185	O15231	689 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	RAMP2	O60895	175 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	GYPC	P04921	128 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ERVK-10	P10266	1014 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TAL1	P17542	331 aa	Predicted RBP	16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CYP2W1	Q8TAV3	490 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	MKL1	Q969V6	931 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PPP1R36	Q96LQ0	422 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ZSWIM1	Q9BR11	485 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CHORDC1	Q9UHD1	332 aa	Predicted RBP	16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	FAM86B1	E9PN63	330 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SLITRK3	O94933	977 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	FAM86B2	P0C5J1	330 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SOAT1	P35610	550 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	COIL	P38432	576 aa	Predicted RBP	16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CAPZA2	P47755	286 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SCNN1B	P51168	640 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TFDP3	Q5H9I0	405 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	RGS9BP	Q6ZS82	235 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	FAM161B	Q96MY7	647 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PNKP	Q96T60	521 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	GAD1	Q99259	594 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	MRPL1	Q9BYD6	325 aa	Known RBP	16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PDGFD	Q9GZP0	370 aa	Predicted RBP	16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CYP39A1	Q9NYL5	469 aa		16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	WARS2	Q9UGM6	360 aa	Known RBP	16.28	■□□□□ 0.2
NCAPD3-213	ENST00000534532	FNTA	P49354	379 aa		16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	NCALD	P61601	193 aa		16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PCBP1	Q15365	356 aa	Known RBP eCLIP	16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SLC39A12	Q504Y0	691 aa		16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	STX19	Q8N4C7	294 aa		16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TMA16	Q96EY4	203 aa	Known RBP	16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	USP18	Q9UMW8	372 aa		16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	RRP15	Q9Y3B9	282 aa	Known RBP	16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	DYRK1B	Q9Y463	629 aa		16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PLA2G4A	P47712	749 aa		16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ANXA11	P50995	505 aa	Known RBP	16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	MRPS6	P82932	125 aa	Known RBP	16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	MARC1	Q5VT66	337 aa		16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	VSIG10L	Q86VR7	867 aa		16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	BRSK2	Q8IWQ3	736 aa		16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	WDR24	Q96S15	920 aa		16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ATP13A1	Q9HD20	1204 aa		16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	NT5M	Q9NPB1	228 aa		16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TSPAN16	Q9UKR8	245 aa		16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CDY2A	Q9Y6F7	541 aa		16.27	■□□□□ 0.2
NCAPD3-213	ENST00000534532	EVPLL	A8MZ36	301 aa		16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	JCHAIN	P01591	159 aa		16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	ATP5B	P06576	529 aa	Known RBP	16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	SERPINF2	P08697	491 aa		16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	TRPM4	Q8TD43	1214 aa		16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	KCNB2	Q92953	911 aa		16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	SGSM3	Q96HU1	749 aa		16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	DNAJC7	Q99615	494 aa		16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	ADAM33	Q9BZ11	813 aa		16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	ZCCHC2	Q9C0B9	1178 aa	Known RBP	16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	DTNA	Q9Y4J8	743 aa		16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	KCNJ1	P48048	391 aa		16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	CCL23	P55773	120 aa		16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	TGM3	Q08188	693 aa		16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	EDEM1	Q92611	657 aa		16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	FAM167B	Q9BTA0	163 aa		16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	GPATCH2L	Q9NWQ4	482 aa		16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	AKAP7	Q9P0M2	348 aa	Predicted RBP	16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	PLAGL2	Q9UPG8	496 aa		16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	CDYL	Q9Y232	598 aa		16.27	■□□□□ 0.19
NCAPD3-213	ENST00000534532	LACTBL1	A8MY62	500 aa		16.26	■□□□□ 0.19
NCAPD3-213	ENST00000534532	PBLD	P30039	288 aa	Predicted RBP	16.26	■□□□□ 0.19
NCAPD3-213	ENST00000534532	CTCF	P49711	727 aa	Predicted RBP	16.26	■□□□□ 0.19
NCAPD3-213	ENST00000534532	MAP3K10	Q02779	954 aa		16.26	■□□□□ 0.19
NCAPD3-213	ENST00000534532	KCNT1	Q5JUK3	1230 aa		16.26	■□□□□ 0.19

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms