RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 E2F8A0AVK6 867 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 PRR5-ARHGAP8B1AHC4 643 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 RNF40O75150 1001 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 RETP07949 1114 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 SLC5A3P53794 718 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 ARHGAP8P85298 464 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 PUM1Q14671 1186 aaKnown RBP eCLIP14.19□□□□□ -0.14
CAPN1-228ENST00000534373 ZNF658Q5TYW1 1059 aaPredicted RBP14.19□□□□□ -0.14
CAPN1-228ENST00000534373 SPOPLQ6IQ16 392 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 ELOA2Q8IYF1 753 aaPredicted RBP14.19□□□□□ -0.14
CAPN1-228ENST00000534373 ENGASEQ8NFI3 743 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 SCAMP5Q8TAC9 235 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 SPATA20Q8TB22 786 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 SLC2A14Q8TDB8 520 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 TAS1R2Q8TE23 839 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 OTUB2Q96DC9 234 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 HNRNPABQ99729 332 aaKnown RBP14.19□□□□□ -0.14
CAPN1-228ENST00000534373 NT5C1AQ9BXI3 368 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 PNPLA8Q9NP80 782 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 KRT82Q9NSB4 513 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 C2orf42Q9NWW7 574 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 CHORDC1Q9UHD1 332 aaPredicted RBP14.19□□□□□ -0.14
CAPN1-228ENST00000534373 DCHS1Q96JQ0 3298 aa14.19□□□□□ -0.14
CAPN1-228ENST00000534373 COCHO43405 550 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 FOXD2O60548 495 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-228ENST00000534373 SMC2O95347 1197 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 FAM200BP0CF97 657 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 TRIM49P0CI25 452 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 TRIM49CP0CI26 452 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 EPB41P11171 864 aaKnown RBP14.18□□□□□ -0.14
CAPN1-228ENST00000534373 MBL2P11226 248 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-228ENST00000534373 EIF2DP41214 584 aaKnown RBP14.18□□□□□ -0.14
CAPN1-228ENST00000534373 LMNB2Q03252 620 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 DMWDQ09019 674 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 IFRD2Q12894 506 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-228ENST00000534373 PNOCQ13519 176 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 SYT13Q7L8C5 426 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 FILIP1Q7Z7B0 1213 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 C12orf29Q8N999 325 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 ZMIZ2Q8NF64 920 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 ACDQ96AP0 544 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 ELMO3Q96BJ8 720 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 CYFIP2Q96F07 1278 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 SMOQ99835 787 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 NIF3L1Q9GZT8 377 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 APOBEC3GQ9HC16 384 aaKnown RBP14.18□□□□□ -0.14
CAPN1-228ENST00000534373 TLR8Q9NR97 1041 aaKnown RBP14.18□□□□□ -0.14
CAPN1-228ENST00000534373 DLL3Q9NYJ7 618 aa14.18□□□□□ -0.14
CAPN1-228ENST00000534373 A0A0A0MRY4 1105 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 CILPO75339 1184 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 BEST1O76090 585 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 CCDC130P13994 396 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 TGM1P22735 817 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 PRCPP42785 496 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 MAP3K7CLP57077 242 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 FKBP3Q00688 224 aaKnown RBP14.17□□□□□ -0.14
CAPN1-228ENST00000534373 DHCR24Q15392 516 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 HEATR6Q6AI08 1181 aaKnown RBP14.17□□□□□ -0.14
CAPN1-228ENST00000534373 PKN3Q6P5Z2 889 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 PRR23BQ6ZRT6 265 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 FBXL13Q8NEE6 735 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 RMDN1Q96DB5 314 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 LOXL4Q96JB6 756 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 TSG101Q99816 390 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 RAB20Q9NX57 234 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 SMPD4Q9NXE4 827 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 CFAP97Q9P2B7 532 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 HMGXB4Q9UGU5 601 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 SCML2Q9UQR0 700 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 PCDHA5Q9Y5H7 936 aa14.17□□□□□ -0.14
CAPN1-228ENST00000534373 HELZP42694 1942 aaKnown RBP14.17□□□□□ -0.14
CAPN1-228ENST00000534373 SLC16A3O15427 465 aaKnown RBP14.16□□□□□ -0.14
CAPN1-228ENST00000534373 ADH1CP00326 375 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 CYP17A1P05093 508 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 OPRD1P41143 372 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 PPP1R2P41236 205 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 MXI1P50539 228 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 LRRC63Q05C16 580 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 PREPLQ4J6C6 727 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-228ENST00000534373 KLHDC10Q6PID8 442 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 RHBDF2Q6PJF5 856 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 CLEC20AQ6ZU45 233 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 CEP68Q76N32 757 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 ZC3H3Q8IXZ2 948 aaKnown RBP14.16□□□□□ -0.14
CAPN1-228ENST00000534373 SMYD4Q8IYR2 804 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-228ENST00000534373 ZNF276Q8N554 614 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 RPLP0P6Q8NHW5 317 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 WHAMMQ8TF30 809 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 GAB3Q8WWW8 586 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 EZH1Q92800 747 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-228ENST00000534373 SMARCE1Q969G3 411 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 ZFRQ96KR1 1074 aaKnown RBP14.16□□□□□ -0.14
CAPN1-228ENST00000534373 FAM49BQ9NUQ9 324 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 GMIPQ9P107 970 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 EBF1Q9UH73 591 aa14.16□□□□□ -0.14
CAPN1-228ENST00000534373 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-228ENST00000534373 HHLA1C9JL84 531 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 K7EQS6 105 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 TLR5O60602 858 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 ATP5C1P36542 298 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms