RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 HGFP14210 728 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 TPH1P17752 444 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 GKP32189 559 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 PIK3CBP42338 1070 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 TIRAPP58753 221 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 DAG1Q14118 895 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 PROSER3Q2NL68 480 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 TMEM119Q4V9L6 283 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 L1TD1Q5T7N2 865 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 PLAG1Q6DJT9 500 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 RAB11FIP4Q86YS3 637 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 SIRT6Q8N6T7 355 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 INO80BQ9C086 356 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 PNPLA8Q9NP80 782 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 ZNF212Q9UDV6 495 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 AMFRQ9UKV5 643 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 CAPN11Q9UMQ6 739 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 FAM50BQ9Y247 325 aa4.78□□□□□ -1.64
ATPAF1-211ENST00000534216 CGB1A6NKQ9 187 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 SMIM22K7EJ46 135 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 AGPSO00116 658 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 PMPCBO75439 489 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 A1BGP04217 495 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 MYCLP12524 364 aaPredicted RBP4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 SLC5A1P13866 664 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 FPR3P25089 353 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 MTHFSP49914 203 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 GATMP50440 423 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 PGDP52209 483 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 ZNF543Q08ER8 600 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 FOXF2Q12947 444 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 STK3Q13188 491 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 KCNAB1Q14722 419 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 COBLL1Q53SF7 1204 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 KIRREL2Q6UWL6 708 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 TRIM72Q6ZMU5 477 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 ZNF782Q6ZMW2 699 aaPredicted RBP4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 RNF44Q7L0R7 432 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 SRRM1Q8IYB3 904 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 TERB1Q8NA31 727 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 CYP2W1Q8TAV3 490 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 DAZAP1Q96EP5 407 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 SNX18Q96RF0 628 aa4.77□□□□□ -1.65
ATPAF1-211ENST00000534216 TISP43B9A030 160 aa4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 H7C1Q1 480 aa4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 M0R3H8 397 aa4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 KPNA5O15131 536 aa4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 FGAP02671 866 aa4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 PARP1P09874 1014 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 TRIM27P14373 513 aa4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 CASP5P51878 434 aa4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 SUMO2P61956 95 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 PSG6Q00889 435 aa4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 SLC10A2Q12908 348 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 HLTFQ14527 1009 aaKnown RBP eCLIP4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 SAFBQ15424 915 aaKnown RBP eCLIP4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 RNASE12Q5GAN4 147 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 PRAMEF17Q5VTA0 474 aa4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 SFTPA1Q8IWL2 248 aa4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 CTHRC1Q96CG8 243 aa4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 IQCDQ96DY2 449 aa4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 ZNF668Q96K58 619 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 CIPCQ9C0C6 399 aa4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 TRIM36Q9NQ86 728 aa4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 TBC1D23Q9NUY8 699 aa4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 GEMIN8Q9NWZ8 242 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-211ENST00000534216 POM121BA6NF01 834 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 CES2O00748 559 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 APAF1O14727 1248 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 PMM2O15305 246 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 SPRY2O43597 315 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 EXOC3O60645 756 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 LATS1O95835 1130 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 GNALP38405 381 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 PRIM2P49643 509 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 TUBA4AP68366 448 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 SRSF4Q08170 494 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 GRM1Q13255 1194 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 MANEALQ5VSG8 457 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 KLHDC7AQ5VTJ3 777 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 PTCHD4Q6ZW05 846 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 CHSY1Q86X52 802 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 CCAR1Q8IX12 1150 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 ATP11CQ8NB49 1132 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 PJA1Q8NG27 643 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 DDB2Q92466 427 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 WDYHV1Q96HA8 205 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 FLRT1Q9NZU1 646 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 DNAJB11Q9UBS4 358 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 VPS51Q9UID3 782 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 RIMKLBQ9ULI2 386 aa4.75□□□□□ -1.65
ATPAF1-211ENST00000534216 PRRT4C9JH25 899 aa4.74□□□□□ -1.65
ATPAF1-211ENST00000534216 EXOC5O00471 708 aa4.74□□□□□ -1.65
ATPAF1-211ENST00000534216 THAP12O43422 761 aa4.74□□□□□ -1.65
ATPAF1-211ENST00000534216 PHKG2P15735 406 aa4.74□□□□□ -1.65
ATPAF1-211ENST00000534216 CREB1P16220 341 aa4.74□□□□□ -1.65
ATPAF1-211ENST00000534216 TSHRP16473 764 aa4.74□□□□□ -1.65
ATPAF1-211ENST00000534216 NTSR1P30989 418 aa4.74□□□□□ -1.65
ATPAF1-211ENST00000534216 RENBPP51606 427 aa4.74□□□□□ -1.65
ATPAF1-211ENST00000534216 HSP90AB2PQ58FF8 381 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms