RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 FAM163BP0C2L3 166 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 PNMA6AP0CW24 399 aaPredicted RBP6.54□□□□□ -1.36
CMTM1-220ENST00000534143 FERP16591 822 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 SYN1P17600 705 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 IBSPP21815 317 aaPredicted RBP6.54□□□□□ -1.36
CMTM1-220ENST00000534143 TBXAS1P24557 533 aaPredicted RBP6.54□□□□□ -1.36
CMTM1-220ENST00000534143 PNPLA4P41247 253 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 STAT1P42224 750 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 ASPAP45381 313 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 GATMP50440 423 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 LILRA4P59901 499 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 WDR5P61964 334 aaKnown RBP6.54□□□□□ -1.36
CMTM1-220ENST00000534143 DEFB103AP81534 67 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 GSTM4Q03013 218 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 FPGSQ05932 587 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 PCDH1Q08174 1060 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 TUSC3Q13454 348 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 RAPGEF1Q13905 1077 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 UPP1Q16831 310 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 ZNF423Q2M1K9 1284 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 ZNF699Q32M78 642 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 WDR72Q3MJ13 1102 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 TMEM240Q5SV17 173 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 SFMBT2Q5VUG0 894 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 ZNF365Q70YC5 407 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 ZNF280BQ86YH2 543 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 TMTC1Q8IUR5 882 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 COLGALT2Q8IYK4 626 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 CCDC112Q8NEF3 446 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 OLIG1Q8TAK6 271 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 URGCPQ8TCY9 931 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 RSPH1Q8WYR4 309 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 ZNF689Q96CS4 500 aaPredicted RBP6.54□□□□□ -1.36
CMTM1-220ENST00000534143 UROC1Q96N76 676 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 SPAG5Q96R06 1193 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 BAG1Q99933 345 aaPredicted RBP6.54□□□□□ -1.36
CMTM1-220ENST00000534143 PAAF1Q9BRP4 392 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 SYT11Q9BT88 431 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 TMPRSS13Q9BYE2 586 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 FAM124BQ9H5Z6 455 aaPredicted RBP6.54□□□□□ -1.36
CMTM1-220ENST00000534143 NRDE2Q9H7Z3 1164 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 CYP3A43Q9HB55 503 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 TBC1D13Q9NVG8 400 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 ARHGAP20Q9P2F6 1191 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 CACNG4Q9UBN1 327 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 PRKAG2Q9UGJ0 569 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 DCTN4Q9UJW0 460 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 ZMYND8Q9ULU4 1186 aaPredicted RBP6.54□□□□□ -1.36
CMTM1-220ENST00000534143 INPP5FQ9Y2H2 1132 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 NR2E3Q9Y5X4 410 aa6.54□□□□□ -1.36
CMTM1-220ENST00000534143 SSU72P8A0A1W2PR75 194 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 CASTOR2A6NHX0 329 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 KPNA7A9QM74 516 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 TMEM189-UBE2V1I3L0A0 370 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 PODXLO00592 558 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 GSC2O15499 205 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 GFPT2O94808 682 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 IGLV1-40P01703 118 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 AMHP03971 560 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 SERPING1P05155 500 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 PLEKP08567 350 aaPredicted RBP6.53□□□□□ -1.36
CMTM1-220ENST00000534143 WEE2P0C1S8 567 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 SKILP12757 684 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 P4HA1P13674 534 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 ITPKAP23677 461 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 PAX3P23760 479 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 PREPP48147 710 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 AARSP49588 968 aaKnown RBP eCLIP6.53□□□□□ -1.36
CMTM1-220ENST00000534143 TAF6P49848 677 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 CLCNKBP51801 687 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 ZNF132P52740 706 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 CDH8P55286 799 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 MYO1EQ12965 1108 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 ASIC2Q16515 512 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 SOWAHAQ2M3V2 549 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 ASTE1Q2TB18 679 aaPredicted RBP6.53□□□□□ -1.36
CMTM1-220ENST00000534143 SV2CQ496J9 727 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 EXOSC6Q5RKV6 272 aaKnown RBP6.53□□□□□ -1.36
CMTM1-220ENST00000534143 FDX2Q6P4F2 183 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 DCLRE1AQ6PJP8 1040 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 CYP26C1Q6V0L0 522 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 RAD9BQ6WBX8 426 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 DPH6Q7L8W6 267 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 OTOP2Q7RTS6 562 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 FMNL3Q8IVF7 1028 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 FAM20CQ8IXL6 584 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 C3orf58Q8NDZ4 430 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 HERVK_113Q902F9 699 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 ZNF560Q96MR9 790 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 PSMG3-AS1Q96PY0 264 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.53□□□□□ -1.36
CMTM1-220ENST00000534143 TMEM175Q9BSA9 504 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 NRSN2Q9GZP1 204 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 SMYD3Q9H7B4 428 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 RC3H2Q9HBD1 1191 aaKnown RBP6.53□□□□□ -1.36
CMTM1-220ENST00000534143 ZFP64Q9NPA5 681 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 CISHQ9NSE2 258 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 ZNHIT6Q9NWK9 470 aaKnown RBP6.53□□□□□ -1.36
CMTM1-220ENST00000534143 NME7Q9Y5B8 376 aa6.53□□□□□ -1.36
CMTM1-220ENST00000534143 SNX9Q9Y5X1 595 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms