RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 TNMDQ9H2S6 317 aa22.68■■□□□ 1.22
SSH3-211ENST00000534112 ZDHHC4Q9NPG8 344 aa22.68■■□□□ 1.22
SSH3-211ENST00000534112 TMEM74BQ9NUR3 256 aa22.68■■□□□ 1.22
SSH3-211ENST00000534112 BCCIPQ9P287 314 aaKnown RBP eCLIP22.68■■□□□ 1.22
SSH3-211ENST00000534112 THADAQ6YHU6 1953 aa22.68■■□□□ 1.22
SSH3-211ENST00000534112 KIAA1549LQ6ZVL6 1849 aa22.68■■□□□ 1.22
SSH3-211ENST00000534112 NUP205Q92621 2012 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 E2F8A0AVK6 867 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.67■■□□□ 1.22
SSH3-211ENST00000534112 CLDN5O00501 218 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 KDSRQ06136 332 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 PSMD6Q15008 389 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 MAP7D1Q3KQU3 841 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 SPDYCQ5MJ68 293 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 LY6G5CQ5SRR4 150 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 EPM2AIP1Q7L775 607 aaPredicted RBP22.67■■□□□ 1.22
SSH3-211ENST00000534112 NUP93Q8N1F7 819 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 B3GALNT2Q8NCR0 500 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 DEFB124Q8NES8 71 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 ZNF507Q8TCN5 953 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 CCDC127Q96BQ5 260 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 CGRRF1Q99675 332 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 TMEM121BQ9BXQ6 578 aaPredicted RBP22.67■■□□□ 1.22
SSH3-211ENST00000534112 NUSAP1Q9BXS6 441 aaKnown RBP22.67■■□□□ 1.22
SSH3-211ENST00000534112 ADAM33Q9BZ11 813 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 LRRC27Q9C0I9 530 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 AGPAT3Q9NRZ7 376 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 KBTBD4Q9NVX7 518 aa22.67■■□□□ 1.22
SSH3-211ENST00000534112 A8MXQ7 604 aa22.66■■□□□ 1.22
SSH3-211ENST00000534112 EIF3DO15371 548 aaKnown RBP eCLIP22.66■■□□□ 1.22
SSH3-211ENST00000534112 TGFB1I1O43294 461 aa22.66■■□□□ 1.22
SSH3-211ENST00000534112 COCHO43405 550 aa22.66■■□□□ 1.22
SSH3-211ENST00000534112 CYP24A1Q07973 514 aa22.66■■□□□ 1.22
SSH3-211ENST00000534112 BYSLQ13895 437 aaKnown RBP22.66■■□□□ 1.22
SSH3-211ENST00000534112 PGBD3Q8N328 593 aa22.66■■□□□ 1.22
SSH3-211ENST00000534112 PHTF2Q8N3S3 785 aa22.66■■□□□ 1.22
SSH3-211ENST00000534112 ZFRQ96KR1 1074 aaKnown RBP22.66■■□□□ 1.22
SSH3-211ENST00000534112 SCNM1Q9BWG6 230 aa22.66■■□□□ 1.22
SSH3-211ENST00000534112 TRIM9Q9C026 710 aa22.66■■□□□ 1.22
SSH3-211ENST00000534112 CHORDC1Q9UHD1 332 aaPredicted RBP22.66■■□□□ 1.22
SSH3-211ENST00000534112 TCRBV21S2A2A0A5A6 115 aa22.65■■□□□ 1.22
SSH3-211ENST00000534112 TBC1D3BA6NDS4 549 aa22.65■■□□□ 1.22
SSH3-211ENST00000534112 RTN3O95197 1032 aaPredicted RBP22.65■■□□□ 1.22
SSH3-211ENST00000534112 MAPK8P45983 427 aa22.65■■□□□ 1.22
SSH3-211ENST00000534112 GAD2Q05329 585 aa22.65■■□□□ 1.22
SSH3-211ENST00000534112 PDZD8Q8NEN9 1154 aa22.65■■□□□ 1.22
SSH3-211ENST00000534112 OVCA2Q8WZ82 227 aa22.65■■□□□ 1.22
SSH3-211ENST00000534112 ZNF516Q92618 1163 aa22.65■■□□□ 1.22
SSH3-211ENST00000534112 FBXO32Q969P5 355 aa22.65■■□□□ 1.22
SSH3-211ENST00000534112 OTUB2Q96DC9 234 aa22.65■■□□□ 1.22
SSH3-211ENST00000534112 KCNK16Q96T55 309 aa22.65■■□□□ 1.22
SSH3-211ENST00000534112 NXF1Q9UBU9 619 aaKnown RBP22.65■■□□□ 1.22
SSH3-211ENST00000534112 SPEGQ15772 3267 aa22.65■■□□□ 1.22
SSH3-211ENST00000534112 ASCC3Q8N3C0 2202 aaKnown RBP22.65■■□□□ 1.22
SSH3-211ENST00000534112 CLIC2O15247 247 aa22.64■■□□□ 1.21
SSH3-211ENST00000534112 STAU1O95793 577 aaKnown RBP22.64■■□□□ 1.21
SSH3-211ENST00000534112 ENGP17813 658 aa22.64■■□□□ 1.21
SSH3-211ENST00000534112 CYP2J2P51589 502 aa22.64■■□□□ 1.21
SSH3-211ENST00000534112 MYL6P60660 151 aa22.64■■□□□ 1.21
SSH3-211ENST00000534112 TRPC3Q13507 836 aa22.64■■□□□ 1.21
SSH3-211ENST00000534112 E2F4Q16254 413 aa22.64■■□□□ 1.21
SSH3-211ENST00000534112 HECTD3Q5T447 861 aa22.64■■□□□ 1.21
SSH3-211ENST00000534112 LYSMD4Q5XG99 296 aa22.64■■□□□ 1.21
SSH3-211ENST00000534112 ETFBKMTQ8IXQ9 262 aa22.64■■□□□ 1.21
SSH3-211ENST00000534112 NAT16Q8N8M0 369 aa22.64■■□□□ 1.21
SSH3-211ENST00000534112 XXYLT1Q8NBI6 393 aa22.64■■□□□ 1.21
SSH3-211ENST00000534112 SCAMP5Q8TAC9 235 aa22.64■■□□□ 1.21
SSH3-211ENST00000534112 KCNV2Q8TDN2 545 aa22.64■■□□□ 1.21
SSH3-211ENST00000534112 GZF1Q9H116 711 aaPredicted RBP22.64■■□□□ 1.21
SSH3-211ENST00000534112 XYLT2Q9H1B5 865 aa22.64■■□□□ 1.21
SSH3-211ENST00000534112 PILRBQ9UKJ0 227 aa22.64■■□□□ 1.21
SSH3-211ENST00000534112 HELZP42694 1942 aaKnown RBP22.64■■□□□ 1.21
SSH3-211ENST00000534112 CACNA1EQ15878 2313 aa22.63■■□□□ 1.21
SSH3-211ENST00000534112 ITPKAP23677 461 aa22.63■■□□□ 1.21
SSH3-211ENST00000534112 DPP6P42658 865 aa22.63■■□□□ 1.21
SSH3-211ENST00000534112 NASPP49321 788 aaPredicted RBP22.63■■□□□ 1.21
SSH3-211ENST00000534112 ASIC1P78348 528 aa22.63■■□□□ 1.21
SSH3-211ENST00000534112 AMPD3Q01432 767 aa22.63■■□□□ 1.21
SSH3-211ENST00000534112 FAM26FQ5R3K3 315 aa22.63■■□□□ 1.21
SSH3-211ENST00000534112 SNX30Q5VWJ9 437 aa22.63■■□□□ 1.21
SSH3-211ENST00000534112 BTBD8Q5XKL5 378 aa22.63■■□□□ 1.21
SSH3-211ENST00000534112 SLC23A3Q6PIS1 610 aa22.63■■□□□ 1.21
SSH3-211ENST00000534112 GATA6Q92908 595 aa22.63■■□□□ 1.21
SSH3-211ENST00000534112 CUEDC2Q9H467 287 aa22.63■■□□□ 1.21
SSH3-211ENST00000534112 SLC32A1Q9H598 525 aa22.63■■□□□ 1.21
SSH3-211ENST00000534112 DEC1Q9P2X7 70 aa22.63■■□□□ 1.21
SSH3-211ENST00000534112 MTMR6Q9Y217 621 aa22.63■■□□□ 1.21
SSH3-211ENST00000534112 SH3BP1Q9Y3L3 701 aa22.63■■□□□ 1.21
SSH3-211ENST00000534112 ZFYVE26Q68DK2 2539 aa22.63■■□□□ 1.21
SSH3-211ENST00000534112 TMEM8BA6NDV4 472 aa22.62■■□□□ 1.21
SSH3-211ENST00000534112 HOXC11O43248 304 aaPredicted RBP22.62■■□□□ 1.21
SSH3-211ENST00000534112 TULP3O75386 442 aa22.62■■□□□ 1.21
SSH3-211ENST00000534112 ATICP31939 592 aa22.62■■□□□ 1.21
SSH3-211ENST00000534112 SNRPFP62306 86 aaKnown RBP22.62■■□□□ 1.21
SSH3-211ENST00000534112 PREPLQ4J6C6 727 aaPredicted RBP22.62■■□□□ 1.21
SSH3-211ENST00000534112 PEAR1Q5VY43 1037 aaPredicted RBP22.62■■□□□ 1.21
SSH3-211ENST00000534112 CNNM4Q6P4Q7 775 aa22.62■■□□□ 1.21
SSH3-211ENST00000534112 TRMT11Q7Z4G4 463 aaKnown RBP22.62■■□□□ 1.21
SSH3-211ENST00000534112 BBS7Q8IWZ6 715 aa22.62■■□□□ 1.21
SSH3-211ENST00000534112 NELFCDQ8IXH7 590 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms