RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 SLC35C1Q96A29 364 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 E2F7Q96AV8 911 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 CYFIP2Q96F07 1278 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 TMEM8AQ9HCN3 771 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 CSNK1G1Q9HCP0 422 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 PARD6AQ9NPB6 346 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 TRPM5Q9NZQ8 1165 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 ARHGAP26Q9UNA1 814 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 CTNND2Q9UQB3 1225 aa10.21□□□□□ -0.77
SSBP3-215ENST00000533946 SPTBN2O15020 2390 aa10.21□□□□□ -0.78
SSBP3-215ENST00000533946 A0A1W2PQH9 124 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 GOLGA6L4A6NEF3 574 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 K7EQS6 105 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 PIK3R2O00459 728 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 MAN2B1O00754 1011 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 TRIM66O15016 1216 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 CETN3O15182 167 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 LILRB5O75023 590 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 RNF40O75150 1001 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 CYP17A1P05093 508 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 FAM163BP0C2L3 166 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 TGM1P22735 817 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 DDX6P26196 483 aaKnown RBP eCLIP10.2□□□□□ -0.78
SSBP3-215ENST00000533946 AP3M2P53677 418 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 SEC13P55735 322 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 SLC7A9P82251 487 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 CCDC6Q16204 474 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 TCERG1LQ5VWI1 586 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 KRT39Q6A163 491 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 BHLHA9Q7RTU4 235 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 RALGPS2Q86X27 583 aaPredicted RBP10.2□□□□□ -0.78
SSBP3-215ENST00000533946 BBS7Q8IWZ6 715 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 KIAA2013Q8IYS2 634 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 ADGRG2Q8IZP9 1017 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 ABCA7Q8IZY2 2146 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 NAT16Q8N8M0 369 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 NELFBQ8WX92 580 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 TIGD1Q96MW7 591 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 GSDMAQ96QA5 445 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 NELL2Q99435 816 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 HNRNPABQ99729 332 aaKnown RBP10.2□□□□□ -0.78
SSBP3-215ENST00000533946 NIF3L1Q9GZT8 377 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 C8orf33Q9H7E9 229 aaPredicted RBP10.2□□□□□ -0.78
SSBP3-215ENST00000533946 DMAP1Q9NPF5 467 aaPredicted RBP10.2□□□□□ -0.78
SSBP3-215ENST00000533946 ACP6Q9NPH0 428 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 CISHQ9NSE2 258 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 RAB20Q9NX57 234 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 UXTQ9UBK9 157 aaPredicted RBP10.2□□□□□ -0.78
SSBP3-215ENST00000533946 AJAP1Q9UKB5 411 aaPredicted RBP10.2□□□□□ -0.78
SSBP3-215ENST00000533946 INVSQ9Y283 1065 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 SPEGQ15772 3267 aa10.2□□□□□ -0.78
SSBP3-215ENST00000533946 FAM170AA1A519 330 aa10.19□□□□□ -0.78
SSBP3-215ENST00000533946 FAM92AA1XBS5 289 aa10.19□□□□□ -0.78
SSBP3-215ENST00000533946 TRDMT1O14717 391 aaKnown RBP10.19□□□□□ -0.78
SSBP3-215ENST00000533946 DCLK1O15075 740 aa10.19□□□□□ -0.78
SSBP3-215ENST00000533946 LMNAP02545 664 aaKnown RBP10.19□□□□□ -0.78
SSBP3-215ENST00000533946 MBL2P11226 248 aaPredicted RBP10.19□□□□□ -0.78
SSBP3-215ENST00000533946 KRT13P13646 458 aa10.19□□□□□ -0.78
SSBP3-215ENST00000533946 ACO1P21399 889 aaKnown RBP10.19□□□□□ -0.78
SSBP3-215ENST00000533946 MXI1P50539 228 aa10.19□□□□□ -0.78
SSBP3-215ENST00000533946 MAPRE1Q15691 268 aaKnown RBP10.19□□□□□ -0.78
SSBP3-215ENST00000533946 COBLL1Q53SF7 1204 aa10.19□□□□□ -0.78
SSBP3-215ENST00000533946 GJB7Q6PEY0 223 aa10.19□□□□□ -0.78
SSBP3-215ENST00000533946 TMEM25Q86YD3 366 aa10.19□□□□□ -0.78
SSBP3-215ENST00000533946 IRF2BP1Q8IU81 584 aa10.19□□□□□ -0.78
SSBP3-215ENST00000533946 FRMD1Q8N878 549 aa10.19□□□□□ -0.78
SSBP3-215ENST00000533946 FBXL13Q8NEE6 735 aa10.19□□□□□ -0.78
SSBP3-215ENST00000533946 UBA3Q8TBC4 463 aa10.19□□□□□ -0.78
SSBP3-215ENST00000533946 CCDC47Q96A33 483 aaKnown RBP10.19□□□□□ -0.78
SSBP3-215ENST00000533946 SMARCD1Q96GM5 515 aa10.19□□□□□ -0.78
SSBP3-215ENST00000533946 HEXIM2Q96MH2 286 aaKnown RBP10.19□□□□□ -0.78
SSBP3-215ENST00000533946 HHIPQ96QV1 700 aa10.19□□□□□ -0.78
SSBP3-215ENST00000533946 NT5C1AQ9BXI3 368 aa10.19□□□□□ -0.78
SSBP3-215ENST00000533946 FBXO4Q9UKT5 387 aa10.19□□□□□ -0.78
SSBP3-215ENST00000533946 MRPS17Q9Y2R5 130 aaKnown RBP10.19□□□□□ -0.78
SSBP3-215ENST00000533946 COQ4Q9Y3A0 265 aa10.19□□□□□ -0.78
SSBP3-215ENST00000533946 KIF20AO95235 890 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 KLKB1P03952 638 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 FAM200BP0CF97 657 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 EPB41P11171 864 aaKnown RBP10.18□□□□□ -0.78
SSBP3-215ENST00000533946 RPL13P26373 211 aaKnown RBP10.18□□□□□ -0.78
SSBP3-215ENST00000533946 CXCL12P48061 93 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 IFNAR2P48551 515 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 MLLT6P55198 1093 aaPredicted RBP10.18□□□□□ -0.78
SSBP3-215ENST00000533946 PLCB2Q00722 1185 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 KDSRQ06136 332 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 DHCR24Q15392 516 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 LY6G5CQ5SRR4 150 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 CC2D1AQ6P1N0 951 aaPredicted RBP10.18□□□□□ -0.78
SSBP3-215ENST00000533946 RRAGAQ7L523 313 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 UNC93AQ86WB7 457 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 MIB1Q86YT6 1006 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 PHTF2Q8N3S3 785 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 SPEM1Q8N4L4 309 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 CCDC33Q8N5R6 958 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 RPLP0P6Q8NHW5 317 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 TAF4BQ92750 862 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 BHMTQ93088 406 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 TNIP3Q96KP6 325 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 KREMEN1Q96MU8 473 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms