RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 GDAP2Q9NXN4 497 aa12.5□□□□□ -0.41
CLP1-205ENST00000533682 ZNF638Q14966 1978 aaKnown RBP12.49□□□□□ -0.41
CLP1-205ENST00000533682 A0A087WUV0 522 aaPredicted RBP12.49□□□□□ -0.41
CLP1-205ENST00000533682 CYB561D2O14569 222 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 SEPT4O43236 478 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 MGEA5O60502 916 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 HUS1O60921 280 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 ADAMTS4O75173 837 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 IL4RP24394 825 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 THPOP40225 353 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 CLCNKBP51801 687 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 EIF3BP55884 814 aaKnown RBP12.49□□□□□ -0.41
CLP1-205ENST00000533682 TAZQ16635 292 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 SPDYCQ5MJ68 293 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 RPAINQ86UA6 219 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 ZC3H18Q86VM9 953 aaKnown RBP12.49□□□□□ -0.41
CLP1-205ENST00000533682 CRYBG2Q8N1P7 616 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 ANKRD52Q8NB46 1076 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 BCAS4Q8TDM0 211 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 SENP6Q9GZR1 1112 aaPredicted RBP12.49□□□□□ -0.41
CLP1-205ENST00000533682 XPNPEP3Q9NQH7 507 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 SLC12A6Q9UHW9 1150 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 TMEM88BA6NKF7 163 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 I3L4J1 428 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 M0QZ92 97 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 GHRP10912 638 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
CLP1-205ENST00000533682 CD52P31358 61 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 LSP1P33241 339 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 PCK1P35558 622 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 MDH1P40925 334 aaKnown RBP12.49□□□□□ -0.41
CLP1-205ENST00000533682 NDUFV1P49821 464 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 HDAC4P56524 1084 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 DPYSL3Q14195 570 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 STILQ15468 1287 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 PAN2Q504Q3 1202 aaKnown RBP12.49□□□□□ -0.41
CLP1-205ENST00000533682 EMC10Q5UCC4 262 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 DRICH1Q6PGQ1 229 aaPredicted RBP12.49□□□□□ -0.41
CLP1-205ENST00000533682 BBS12Q6ZW61 710 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 SERINC5Q86VE9 423 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 CCDC33Q8N5R6 958 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 NKD2Q969F2 451 aaPredicted RBP12.49□□□□□ -0.41
CLP1-205ENST00000533682 TLCD1Q96CP7 247 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 RBM15Q96T37 977 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLP1-205ENST00000533682 TSPYL2Q9H2G4 693 aaPredicted RBP12.49□□□□□ -0.41
CLP1-205ENST00000533682 TRMT13Q9NUP7 481 aaKnown RBP12.49□□□□□ -0.41
CLP1-205ENST00000533682 NINJ2Q9NZG7 142 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 TRPV2Q9Y5S1 764 aa12.49□□□□□ -0.41
CLP1-205ENST00000533682 MYO18AQ92614 2054 aaKnown RBP12.48□□□□□ -0.41
CLP1-205ENST00000533682 ARL5CA6NH57 179 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 CASTOR2A6NHX0 329 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 PRPSAP2O60256 369 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 TTC4O95801 387 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 ITGAVP06756 1048 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 CREB1P16220 341 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 SCNN1GP51170 649 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 AGBL2Q5U5Z8 902 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 ARHGAP17Q68EM7 881 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 C1orf228Q6PIY5 440 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 AGMOQ6ZNB7 445 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 CAPN12Q6ZSI9 719 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 PAQR9Q6ZVX9 377 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 LIMS2Q7Z4I7 341 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 CTU1Q7Z7A3 348 aaKnown RBP12.48□□□□□ -0.41
CLP1-205ENST00000533682 FUKQ8N0W3 1084 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 FAM71DQ8N9W8 422 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 B3GALNT2Q8NCR0 500 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 ZNF560Q96MR9 790 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 PPANQ9NQ55 473 aaKnown RBP12.48□□□□□ -0.41
CLP1-205ENST00000533682 DRG1Q9Y295 367 aaKnown RBP12.48□□□□□ -0.41
CLP1-205ENST00000533682 TCRBV7S3A2A0A539 114 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 ANKRD65E5RJM6 399 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 DNALI1O14645 258 aaPredicted RBP12.48□□□□□ -0.41
CLP1-205ENST00000533682 RASGRF2O14827 1237 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 SDC4P31431 198 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 PPP2R2AP63151 447 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 PITX1P78337 314 aaPredicted RBP12.48□□□□□ -0.41
CLP1-205ENST00000533682 BST2Q10589 180 aaKnown RBP12.48□□□□□ -0.41
CLP1-205ENST00000533682 AUHQ13825 339 aaKnown RBP12.48□□□□□ -0.41
CLP1-205ENST00000533682 SV2CQ496J9 727 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 PPP6R3Q5H9R7 873 aaPredicted RBP12.48□□□□□ -0.41
CLP1-205ENST00000533682 ANKRD22Q5VYY1 191 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 TRMT10CQ7L0Y3 403 aaKnown RBP12.48□□□□□ -0.41
CLP1-205ENST00000533682 SPATA18Q8TC71 538 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 TMEM30AQ9NV96 361 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 PADI3Q9ULW8 664 aa12.48□□□□□ -0.41
CLP1-205ENST00000533682 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.48□□□□□ -0.41
CLP1-205ENST00000533682 TTC3P53804 2025 aa12.47□□□□□ -0.41
CLP1-205ENST00000533682 RGS16O15492 202 aaPredicted RBP12.47□□□□□ -0.41
CLP1-205ENST00000533682 PIAS1O75925 651 aa12.47□□□□□ -0.41
CLP1-205ENST00000533682 ENDOD1O94919 500 aa12.47□□□□□ -0.41
CLP1-205ENST00000533682 POMCP01189 267 aa12.47□□□□□ -0.41
CLP1-205ENST00000533682 LMNB2Q03252 620 aa12.47□□□□□ -0.41
CLP1-205ENST00000533682 ACAP1Q15027 740 aa12.47□□□□□ -0.41
CLP1-205ENST00000533682 PTGISQ16647 500 aa12.47□□□□□ -0.41
CLP1-205ENST00000533682 PIGZQ86VD9 579 aa12.47□□□□□ -0.41
CLP1-205ENST00000533682 SENP8Q96LD8 212 aa12.47□□□□□ -0.41
CLP1-205ENST00000533682 SNRNP25Q9BV90 132 aaKnown RBP12.47□□□□□ -0.41
CLP1-205ENST00000533682 FAM107BQ9H098 131 aa12.47□□□□□ -0.41
CLP1-205ENST00000533682 FAM124BQ9H5Z6 455 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms