RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	TRDMT1	O14717	391 aa	Known RBP	18.72	■□□□□ 0.59
BBS1-223	ENST00000533644	ABL1	P00519	1130 aa		18.72	■□□□□ 0.59
BBS1-223	ENST00000533644	ADORA2B	P29275	332 aa		18.72	■□□□□ 0.59
BBS1-223	ENST00000533644	IFNAR2	P48551	515 aa		18.72	■□□□□ 0.59
BBS1-223	ENST00000533644	TUB	P50607	506 aa		18.72	■□□□□ 0.59
BBS1-223	ENST00000533644	MAP3K7CL	P57077	242 aa		18.72	■□□□□ 0.59
BBS1-223	ENST00000533644	UBE2H	P62256	183 aa		18.72	■□□□□ 0.59
BBS1-223	ENST00000533644	AMPD2	Q01433	879 aa		18.72	■□□□□ 0.59
BBS1-223	ENST00000533644	TSSK4	Q6SA08	328 aa		18.72	■□□□□ 0.59
BBS1-223	ENST00000533644		Q6ZS52	159 aa		18.72	■□□□□ 0.59
BBS1-223	ENST00000533644	CLEC20A	Q6ZU45	233 aa		18.72	■□□□□ 0.59
BBS1-223	ENST00000533644	CYFIP2	Q96F07	1278 aa		18.72	■□□□□ 0.59
BBS1-223	ENST00000533644	ARID3A	Q99856	593 aa		18.72	■□□□□ 0.59
BBS1-223	ENST00000533644	FAM126A	Q9BYI3	521 aa	Predicted RBP	18.72	■□□□□ 0.59
BBS1-223	ENST00000533644	METTL14	Q9HCE5	456 aa	Known RBP	18.72	■□□□□ 0.59
BBS1-223	ENST00000533644	PNPLA8	Q9NP80	782 aa		18.72	■□□□□ 0.59
BBS1-223	ENST00000533644	ZSCAN32	Q9NX65	697 aa		18.72	■□□□□ 0.59
BBS1-223	ENST00000533644	CPQ	Q9Y646	472 aa		18.72	■□□□□ 0.59
BBS1-223	ENST00000533644	FAM186A	A6NE01	2351 aa		18.71	■□□□□ 0.59
BBS1-223	ENST00000533644	PTPRZ1	P23471	2315 aa	Predicted RBP	18.71	■□□□□ 0.59
BBS1-223	ENST00000533644	HHLA1	C9JL84	531 aa		18.71	■□□□□ 0.59
BBS1-223	ENST00000533644	LILRB5	O75023	590 aa		18.71	■□□□□ 0.59
BBS1-223	ENST00000533644	PAPSS2	O95340	614 aa	Predicted RBP	18.71	■□□□□ 0.59
BBS1-223	ENST00000533644	LMNA	P02545	664 aa	Known RBP	18.71	■□□□□ 0.59
BBS1-223	ENST00000533644	GJA4	P35212	333 aa		18.71	■□□□□ 0.59
BBS1-223	ENST00000533644	FSTL4	Q6MZW2	842 aa		18.71	■□□□□ 0.59
BBS1-223	ENST00000533644	GPRIN1	Q7Z2K8	1008 aa		18.71	■□□□□ 0.59
BBS1-223	ENST00000533644	FILIP1	Q7Z7B0	1213 aa		18.71	■□□□□ 0.59
BBS1-223	ENST00000533644	TTC16	Q8NEE8	873 aa		18.71	■□□□□ 0.59
BBS1-223	ENST00000533644	NELFB	Q8WX92	580 aa		18.71	■□□□□ 0.59
BBS1-223	ENST00000533644	TATDN2	Q93075	761 aa		18.71	■□□□□ 0.59
BBS1-223	ENST00000533644	DNAI2	Q9GZS0	605 aa		18.71	■□□□□ 0.59
BBS1-223	ENST00000533644	FBXO44	Q9H4M3	255 aa		18.71	■□□□□ 0.59
BBS1-223	ENST00000533644	CISH	Q9NSE2	258 aa		18.71	■□□□□ 0.59
BBS1-223	ENST00000533644	GMIP	Q9P107	970 aa		18.71	■□□□□ 0.59
BBS1-223	ENST00000533644	GVINP1	Q7Z2Y8	2422 aa		18.7	■□□□□ 0.58
BBS1-223	ENST00000533644	BICDL2	A1A5D9	508 aa		18.7	■□□□□ 0.58
BBS1-223	ENST00000533644	BIN1	O00499	593 aa		18.7	■□□□□ 0.58
BBS1-223	ENST00000533644	PMM2	O15305	246 aa		18.7	■□□□□ 0.58
BBS1-223	ENST00000533644	COCH	O43405	550 aa		18.7	■□□□□ 0.58
BBS1-223	ENST00000533644	CXCL12	P48061	93 aa		18.7	■□□□□ 0.58
BBS1-223	ENST00000533644	SATB1	Q01826	763 aa		18.7	■□□□□ 0.58
BBS1-223	ENST00000533644	PPP2R5D	Q14738	602 aa		18.7	■□□□□ 0.58
BBS1-223	ENST00000533644	HECTD3	Q5T447	861 aa		18.7	■□□□□ 0.58
BBS1-223	ENST00000533644	KLHL10	Q6JEL2	608 aa		18.7	■□□□□ 0.58
BBS1-223	ENST00000533644	DDX42	Q86XP3	938 aa	Known RBP eCLIP	18.7	■□□□□ 0.58
BBS1-223	ENST00000533644	ZFR	Q96KR1	1074 aa	Known RBP	18.7	■□□□□ 0.58
BBS1-223	ENST00000533644	LINC00597	Q9H2U6	94 aa		18.7	■□□□□ 0.58
BBS1-223	ENST00000533644	SMPD4	Q9NXE4	827 aa		18.7	■□□□□ 0.58
BBS1-223	ENST00000533644	CHORDC1	Q9UHD1	332 aa	Predicted RBP	18.7	■□□□□ 0.58
BBS1-223	ENST00000533644	CTNND2	Q9UQB3	1225 aa		18.7	■□□□□ 0.58
BBS1-223	ENST00000533644	FRYL	O94915	3013 aa		18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	NFATC1	O95644	943 aa		18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	MBL2	P11226	248 aa	Predicted RBP	18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	FMO5	P49326	533 aa		18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	PGF	P49763	221 aa		18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	RAD23B	P54727	409 aa		18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	GRSF1	Q12849	480 aa	Known RBP eCLIP	18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	CUL2	Q13617	745 aa		18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	ZNF394	Q53GI3	561 aa		18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	NAIF1	Q69YI7	327 aa	Predicted RBP	18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	TRIML1	Q8N9V2	468 aa		18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	SLC4A11	Q8NBS3	891 aa		18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	TMEM176A	Q96HP8	235 aa		18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	P2RY13	Q9BPV8	354 aa		18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	DUSP16	Q9BY84	665 aa		18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	CCSER2	Q9H7U1	834 aa		18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	CFAP97	Q9P2B7	532 aa		18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	SCML2	Q9UQR0	700 aa		18.69	■□□□□ 0.58
BBS1-223	ENST00000533644	DMXL1	Q9Y485	3027 aa		18.68	■□□□□ 0.58
BBS1-223	ENST00000533644	SLC9A3R1	O14745	358 aa	Predicted RBP	18.68	■□□□□ 0.58
BBS1-223	ENST00000533644	GALK1	P51570	392 aa		18.68	■□□□□ 0.58
BBS1-223	ENST00000533644	PAK1	Q13153	545 aa		18.68	■□□□□ 0.58
BBS1-223	ENST00000533644	CCDC40	Q4G0X9	1142 aa		18.68	■□□□□ 0.58
BBS1-223	ENST00000533644	ARHGAP17	Q68EM7	881 aa		18.68	■□□□□ 0.58
BBS1-223	ENST00000533644	UBR7	Q8N806	425 aa		18.68	■□□□□ 0.58
BBS1-223	ENST00000533644	SUMF1	Q8NBK3	374 aa		18.68	■□□□□ 0.58
BBS1-223	ENST00000533644	ATRIP	Q8WXE1	791 aa		18.68	■□□□□ 0.58
BBS1-223	ENST00000533644	HEXIM2	Q96MH2	286 aa	Known RBP	18.68	■□□□□ 0.58
BBS1-223	ENST00000533644	FBRSL1	Q9HCM7	1045 aa	Known RBP	18.68	■□□□□ 0.58
BBS1-223	ENST00000533644	C2orf42	Q9NWW7	574 aa		18.68	■□□□□ 0.58
BBS1-223	ENST00000533644	DNAH14	Q0VDD8	3507 aa		18.68	■□□□□ 0.58
BBS1-223	ENST00000533644	OTOGL	Q3ZCN5	2332 aa		18.68	■□□□□ 0.58
BBS1-223	ENST00000533644	MYH10	P35580	1976 aa		18.68	■□□□□ 0.58
BBS1-223	ENST00000533644	MYO16	Q9Y6X6	1858 aa		18.67	■□□□□ 0.58
BBS1-223	ENST00000533644	E2F8	A0AVK6	867 aa		18.67	■□□□□ 0.58
BBS1-223	ENST00000533644		K7ESF4	209 aa		18.67	■□□□□ 0.58
BBS1-223	ENST00000533644	CYP26A1	O43174	497 aa		18.67	■□□□□ 0.58
BBS1-223	ENST00000533644	EGF	P01133	1207 aa		18.67	■□□□□ 0.58
BBS1-223	ENST00000533644	CYP17A1	P05093	508 aa		18.67	■□□□□ 0.58
BBS1-223	ENST00000533644	DRD1	P21728	446 aa		18.67	■□□□□ 0.58
BBS1-223	ENST00000533644	KIF11	P52732	1056 aa		18.67	■□□□□ 0.58
BBS1-223	ENST00000533644	NRL	P54845	237 aa		18.67	■□□□□ 0.58
BBS1-223	ENST00000533644	MARS	P56192	900 aa	Known RBP	18.67	■□□□□ 0.58
BBS1-223	ENST00000533644	NR1H3	Q13133	447 aa		18.67	■□□□□ 0.58
BBS1-223	ENST00000533644	GAB4	Q2WGN9	574 aa		18.67	■□□□□ 0.58
BBS1-223	ENST00000533644	EZH1	Q92800	747 aa	Predicted RBP	18.67	■□□□□ 0.58
BBS1-223	ENST00000533644	EXOC4	Q96A65	974 aa		18.67	■□□□□ 0.58
BBS1-223	ENST00000533644	JAKMIP2	Q96AA8	810 aa		18.67	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms