RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 PARD3BQ8TEW8 1205 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 OSCP1Q8WVF1 389 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 ZNF516Q92618 1163 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 EZH1Q92800 747 aaPredicted RBP9.28□□□□□ -0.92
COPB1-210ENST00000533533 TCEAL3Q969E4 200 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 ACDQ96AP0 544 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 TRMT2BQ96GJ1 504 aaKnown RBP9.28□□□□□ -0.92
COPB1-210ENST00000533533 DHTKD1Q96HY7 919 aaPredicted RBP9.28□□□□□ -0.92
COPB1-210ENST00000533533 MYRFLQ96LU7 910 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 CYP2S1Q96SQ9 504 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 MMS19Q96T76 1030 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 ACBD6Q9BR61 282 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 ABCB6Q9NP58 842 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.28□□□□□ -0.927e-6■■■■■ 74.5
COPB1-210ENST00000533533 DUS2Q9NX74 493 aaKnown RBP9.28□□□□□ -0.92
COPB1-210ENST00000533533 UXTQ9UBK9 157 aaPredicted RBP9.28□□□□□ -0.92
COPB1-210ENST00000533533 EBF1Q9UH73 591 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 SIX4Q9UIU6 781 aa9.28□□□□□ -0.92
COPB1-210ENST00000533533 SPEGQ15772 3267 aa9.27□□□□□ -0.92
COPB1-210ENST00000533533 TRAV19A0A0A6YYK7 116 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 BICDL2A1A5D9 508 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 BCLAF3A2AJT9 711 aaKnown RBP9.27□□□□□ -0.93
COPB1-210ENST00000533533 PPP1R3GB7ZBB8 358 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 NOL4O94818 638 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 CAVIN2O95810 425 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 MBD3O95983 291 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 CST3P01034 146 aaPredicted RBP9.27□□□□□ -0.93
COPB1-210ENST00000533533 CKMP06732 381 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 USP17L7P0C7H9 530 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 BMP6P22004 513 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 CYP2F1P24903 491 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 PIK3CAP42336 1068 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 GCLMP48507 274 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 IFNAR2P48551 515 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 AP3M2P53677 418 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 MYL6P60660 151 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 TNNC1P63316 161 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 FKBP3Q00688 224 aaKnown RBP9.27□□□□□ -0.93
COPB1-210ENST00000533533 LRRC63Q05C16 580 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 PAK1Q13153 545 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 DMC1Q14565 340 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 ZNF77Q15935 545 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 NFIL3Q16649 462 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 TPD52L1Q16890 204 aaPredicted RBP9.27□□□□□ -0.93
COPB1-210ENST00000533533 EML3Q32P44 896 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 ZCWPW2Q504Y3 356 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 COBLL1Q53SF7 1204 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 INTS6LQ5JSJ4 861 aaKnown RBP9.27□□□□□ -0.93
COPB1-210ENST00000533533 PSAPL1Q6NUJ1 521 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 TMEM86AQ8N2M4 240 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 TRIML1Q8N9V2 468 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 GPT2Q8TD30 523 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 TMC2Q8TDI7 906 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 CD101Q93033 1021 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 ATP2A3Q93084 1043 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 SLC22A12Q96S37 553 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 PKMYT1Q99640 499 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 EDEM2Q9BV94 578 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 TRPC7Q9HCX4 862 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 DDX43Q9NXZ2 648 aaKnown RBP9.27□□□□□ -0.93
COPB1-210ENST00000533533 NXF1Q9UBU9 619 aaKnown RBP9.27□□□□□ -0.93
COPB1-210ENST00000533533 GTF3C4Q9UKN8 822 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 L1RE1Q9UN81 338 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 WNT6Q9Y6F9 365 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 CEP192Q8TEP8 1941 aa9.27□□□□□ -0.93
COPB1-210ENST00000533533 CABIN1Q9Y6J0 2220 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 C4orf47A7E2U8 309 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 ACAT1P24752 427 aaKnown RBP9.26□□□□□ -0.93
COPB1-210ENST00000533533 GBP1P32455 592 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 NOVA1P51513 510 aaKnown RBP9.26□□□□□ -0.93
COPB1-210ENST00000533533 DGKEP52429 567 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 MYL7Q01449 175 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 USP4Q13107 963 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 NR1H3Q13133 447 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 NCOA4Q13772 614 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 ZNF699Q32M78 642 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 WDR72Q3MJ13 1102 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 CFAP221Q4G0U5 840 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 DAB2IPQ5VWQ8 1189 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 TDRD10Q5VZ19 366 aaKnown RBP9.26□□□□□ -0.93
COPB1-210ENST00000533533 SCARA5Q6ZMJ2 495 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 ADGRF2Q8IZF7 708 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 CCDC150Q8NCX0 1101 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 TTC16Q8NEE8 873 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 TSTD1Q8NFU3 115 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 CCDC26Q8TAB7 109 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 CXorf38Q8TB03 319 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 SPATA18Q8TC71 538 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 SH3RF2Q8TEC5 729 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 SYAP1Q96A49 352 aaPredicted RBP9.26□□□□□ -0.93
COPB1-210ENST00000533533 ELMO3Q96BJ8 720 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 IMPG2Q9BZV3 1241 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 GZF1Q9H116 711 aaPredicted RBP9.26□□□□□ -0.93
COPB1-210ENST00000533533 LINC00597Q9H2U6 94 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 SNX25Q9H3E2 840 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 GDAP2Q9NXN4 497 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 GCNT4Q9P109 453 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 ARMCX3Q9UH62 379 aaPredicted RBP9.26□□□□□ -0.93
COPB1-210ENST00000533533 WDFY3Q8IZQ1 3526 aa9.26□□□□□ -0.93
COPB1-210ENST00000533533 PLXND1Q9Y4D7 1925 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms