RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ZCWPW2Q504Y3 356 aa16.36■□□□□ 0.21
CPSF1-211ENST00000533492 HECTD3Q5T447 861 aa16.36■□□□□ 0.21
CPSF1-211ENST00000533492 KRT39Q6A163 491 aa16.36■□□□□ 0.21
CPSF1-211ENST00000533492 PKN3Q6P5Z2 889 aa16.36■□□□□ 0.21
CPSF1-211ENST00000533492 FILIP1Q7Z7B0 1213 aa16.36■□□□□ 0.21
CPSF1-211ENST00000533492 KIAA1958Q8N8K9 716 aa16.36■□□□□ 0.21
CPSF1-211ENST00000533492 C12orf29Q8N999 325 aa16.36■□□□□ 0.21
CPSF1-211ENST00000533492 CCDC26Q8TAB7 109 aa16.36■□□□□ 0.21
CPSF1-211ENST00000533492 EEF2KMTQ96G04 330 aa16.36■□□□□ 0.21
CPSF1-211ENST00000533492 GSDMAQ96QA5 445 aa16.36■□□□□ 0.21
CPSF1-211ENST00000533492 TSG101Q99816 390 aa16.36■□□□□ 0.21
CPSF1-211ENST00000533492 SMOQ99835 787 aa16.36■□□□□ 0.21
CPSF1-211ENST00000533492 NT5C1AQ9BXI3 368 aa16.36■□□□□ 0.21
CPSF1-211ENST00000533492 NACA2Q9H009 215 aa16.36■□□□□ 0.21
CPSF1-211ENST00000533492 FBXO44Q9H4M3 255 aa16.36■□□□□ 0.21
CPSF1-211ENST00000533492 APOBEC3GQ9HC16 384 aaKnown RBP16.36■□□□□ 0.21
CPSF1-211ENST00000533492 CFAP97Q9P2B7 532 aa16.36■□□□□ 0.21
CPSF1-211ENST00000533492 HMGXB4Q9UGU5 601 aa16.36■□□□□ 0.21
CPSF1-211ENST00000533492 HELZP42694 1942 aaKnown RBP16.35■□□□□ 0.21
CPSF1-211ENST00000533492 CD58P19256 250 aa16.35■□□□□ 0.21
CPSF1-211ENST00000533492 PRCPP42785 496 aa16.35■□□□□ 0.21
CPSF1-211ENST00000533492 INCA1Q0VD86 236 aa16.35■□□□□ 0.21
CPSF1-211ENST00000533492 ZNF658Q5TYW1 1059 aaPredicted RBP16.35■□□□□ 0.21
CPSF1-211ENST00000533492 NAIF1Q69YI7 327 aaPredicted RBP16.35■□□□□ 0.21
CPSF1-211ENST00000533492 LAIR1Q6GTX8 287 aa16.35■□□□□ 0.21
CPSF1-211ENST00000533492 CEP68Q76N32 757 aa16.35■□□□□ 0.21
CPSF1-211ENST00000533492 WDR5BQ86VZ2 330 aa16.35■□□□□ 0.21
CPSF1-211ENST00000533492 ADGRG2Q8IZP9 1017 aa16.35■□□□□ 0.21
CPSF1-211ENST00000533492 SMARCE1Q969G3 411 aa16.35■□□□□ 0.21
CPSF1-211ENST00000533492 CYFIP2Q96F07 1278 aa16.35■□□□□ 0.21
CPSF1-211ENST00000533492 NIF3L1Q9GZT8 377 aa16.35■□□□□ 0.21
CPSF1-211ENST00000533492 CSNK1G1Q9HCP0 422 aa16.35■□□□□ 0.21
CPSF1-211ENST00000533492 IL37Q9NZH6 218 aa16.35■□□□□ 0.21
CPSF1-211ENST00000533492 USP18Q9UMW8 372 aa16.35■□□□□ 0.21
CPSF1-211ENST00000533492 FRYLO94915 3013 aa16.35■□□□□ 0.21
CPSF1-211ENST00000533492 SCAMP3O14828 347 aaKnown RBP16.34■□□□□ 0.21
CPSF1-211ENST00000533492 COCHO43405 550 aa16.34■□□□□ 0.21
CPSF1-211ENST00000533492 BEST1O76090 585 aa16.34■□□□□ 0.21
CPSF1-211ENST00000533492 MXI1P50539 228 aa16.34■□□□□ 0.21
CPSF1-211ENST00000533492 SRSF5Q13243 272 aaKnown RBP16.34■□□□□ 0.21
CPSF1-211ENST00000533492 SNX30Q5VWJ9 437 aa16.34■□□□□ 0.21
CPSF1-211ENST00000533492 ZMIZ2Q8NF64 920 aa16.34■□□□□ 0.21
CPSF1-211ENST00000533492 RPLP0P6Q8NHW5 317 aa16.34■□□□□ 0.21
CPSF1-211ENST00000533492 TWNKQ96RR1 684 aa16.34■□□□□ 0.21
CPSF1-211ENST00000533492 HNRNPABQ99729 332 aaKnown RBP16.34■□□□□ 0.21
CPSF1-211ENST00000533492 GTPBP4Q9BZE4 634 aaKnown RBP16.34■□□□□ 0.21
CPSF1-211ENST00000533492 TLR8Q9NR97 1041 aaKnown RBP16.34■□□□□ 0.21
CPSF1-211ENST00000533492 GMIPQ9P107 970 aa16.34■□□□□ 0.21
CPSF1-211ENST00000533492 TBC1D14Q9P2M4 693 aa16.34■□□□□ 0.21
CPSF1-211ENST00000533492 SH3BP1Q9Y3L3 701 aa16.34■□□□□ 0.21
CPSF1-211ENST00000533492 E2F8A0AVK6 867 aa16.33■□□□□ 0.2
CPSF1-211ENST00000533492 FAM92AA1XBS5 289 aa16.33■□□□□ 0.2
CPSF1-211ENST00000533492 HOXC13P31276 330 aa16.33■□□□□ 0.2
CPSF1-211ENST00000533492 PXNP49023 591 aaPredicted RBP16.33■□□□□ 0.2
CPSF1-211ENST00000533492 TUBP50607 506 aa16.33■□□□□ 0.2
CPSF1-211ENST00000533492 FKBP3Q00688 224 aaKnown RBP16.33■□□□□ 0.2
CPSF1-211ENST00000533492 DHCR24Q15392 516 aa16.33■□□□□ 0.2
CPSF1-211ENST00000533492 TCERG1LQ5VWI1 586 aa16.33■□□□□ 0.2
CPSF1-211ENST00000533492 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.33■□□□□ 0.2
CPSF1-211ENST00000533492 TTC39CQ8N584 583 aa16.33■□□□□ 0.2
CPSF1-211ENST00000533492 CAMKK1Q8N5S9 505 aa16.33■□□□□ 0.2
CPSF1-211ENST00000533492 FBXL13Q8NEE6 735 aa16.33■□□□□ 0.2
CPSF1-211ENST00000533492 ENGASEQ8NFI3 743 aa16.33■□□□□ 0.2
CPSF1-211ENST00000533492 ERCC4Q92889 916 aaPredicted RBP16.33■□□□□ 0.2
CPSF1-211ENST00000533492 JAKMIP2Q96AA8 810 aa16.33■□□□□ 0.2
CPSF1-211ENST00000533492 ACDQ96AP0 544 aa16.33■□□□□ 0.2
CPSF1-211ENST00000533492 RMDN1Q96DB5 314 aa16.33■□□□□ 0.2
CPSF1-211ENST00000533492 TIGD1Q96MW7 591 aa16.33■□□□□ 0.2
CPSF1-211ENST00000533492 CCSER2Q9H7U1 834 aa16.33■□□□□ 0.2
CPSF1-211ENST00000533492 RAB20Q9NX57 234 aa16.33■□□□□ 0.2
CPSF1-211ENST00000533492 PCDHA5Q9Y5H7 936 aa16.33■□□□□ 0.2
CPSF1-211ENST00000533492 CCDC163A0A0D9SF12 145 aa16.32■□□□□ 0.2
CPSF1-211ENST00000533492 CILPO75339 1184 aa16.32■□□□□ 0.2
CPSF1-211ENST00000533492 ADH1CP00326 375 aa16.32■□□□□ 0.2
CPSF1-211ENST00000533492 CYP17A1P05093 508 aa16.32■□□□□ 0.2
CPSF1-211ENST00000533492 RETP07949 1114 aa16.32■□□□□ 0.2
CPSF1-211ENST00000533492 ZDHHC11BP0C7U3 371 aa16.32■□□□□ 0.2
CPSF1-211ENST00000533492 OPRD1P41143 372 aa16.32■□□□□ 0.2
CPSF1-211ENST00000533492 FOXK2Q01167 660 aa16.32■□□□□ 0.2
CPSF1-211ENST00000533492 SPEM2Q0P670 501 aa16.32■□□□□ 0.2
CPSF1-211ENST00000533492 STIM1Q13586 685 aa16.32■□□□□ 0.2
CPSF1-211ENST00000533492 PUM1Q14671 1186 aaKnown RBP eCLIP16.32■□□□□ 0.2
CPSF1-211ENST00000533492 ZNF394Q53GI3 561 aa16.32■□□□□ 0.2
CPSF1-211ENST00000533492 COBLL1Q53SF7 1204 aa16.32■□□□□ 0.2
CPSF1-211ENST00000533492 DCAF17Q5H9S7 520 aaPredicted RBP16.32■□□□□ 0.2
CPSF1-211ENST00000533492 ANKRD40Q6AI12 368 aa16.32■□□□□ 0.2
CPSF1-211ENST00000533492 CLEC20AQ6ZU45 233 aa16.32■□□□□ 0.2
CPSF1-211ENST00000533492 SYT13Q7L8C5 426 aa16.32■□□□□ 0.2
CPSF1-211ENST00000533492 ERMP1Q7Z2K6 904 aa16.32■□□□□ 0.2
CPSF1-211ENST00000533492 FAXDC2Q96IV6 333 aa16.32■□□□□ 0.2
CPSF1-211ENST00000533492 HEXIM2Q96MH2 286 aaKnown RBP16.32■□□□□ 0.2
CPSF1-211ENST00000533492 SLC16A3O15427 465 aaKnown RBP16.31■□□□□ 0.2
CPSF1-211ENST00000533492 TLR5O60602 858 aa16.31■□□□□ 0.2
CPSF1-211ENST00000533492 CCDC192P0DO97 292 aa16.31■□□□□ 0.2
CPSF1-211ENST00000533492 ACO1P21399 889 aaKnown RBP16.31■□□□□ 0.2
CPSF1-211ENST00000533492 SDHBP21912 280 aa16.31■□□□□ 0.2
CPSF1-211ENST00000533492 SEC13P55735 322 aa16.31■□□□□ 0.2
CPSF1-211ENST00000533492 MCCD1P59942 119 aaPredicted RBP16.31■□□□□ 0.2
CPSF1-211ENST00000533492 LMNB2Q03252 620 aa16.31■□□□□ 0.2
CPSF1-211ENST00000533492 RSPO4Q2I0M5 234 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms