RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 RCN2Q14257 317 aa17.32■□□□□ 0.36
CTSB-228ENST00000533455 ANGEL2Q5VTE6 544 aaKnown RBP17.32■□□□□ 0.36
CTSB-228ENST00000533455 OR52E8Q6IFG1 317 aa17.32■□□□□ 0.36
CTSB-228ENST00000533455 SCARA5Q6ZMJ2 495 aa17.32■□□□□ 0.36
CTSB-228ENST00000533455 TMPRSS6Q8IU80 811 aa17.32■□□□□ 0.36
CTSB-228ENST00000533455 PDCD7Q8N8D1 485 aaKnown RBP17.32■□□□□ 0.36
CTSB-228ENST00000533455 PPFIBP2Q8ND30 876 aa17.32■□□□□ 0.36
CTSB-228ENST00000533455 CCDC110Q8TBZ0 833 aa17.32■□□□□ 0.36
CTSB-228ENST00000533455 SPATA18Q8TC71 538 aa17.32■□□□□ 0.36
CTSB-228ENST00000533455 TSC22D3Q99576 134 aa17.32■□□□□ 0.36
CTSB-228ENST00000533455 SH3GL3Q99963 347 aa17.32■□□□□ 0.36
CTSB-228ENST00000533455 MRPL4Q9BYD3 311 aaKnown RBP17.32■□□□□ 0.36
CTSB-228ENST00000533455 CPSF3Q9UKF6 684 aaKnown RBP17.32■□□□□ 0.36
CTSB-228ENST00000533455 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.32■□□□□ 0.36
CTSB-228ENST00000533455 EME2A4GXA9 379 aaPredicted RBP17.31■□□□□ 0.36
CTSB-228ENST00000533455 TRIM49D1C9J1S8 452 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 I3L4J1 428 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 MSCO60682 206 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 ATP5BP06576 529 aaKnown RBP17.31■□□□□ 0.36
CTSB-228ENST00000533455 HOXC6P09630 235 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 EFNA5P52803 228 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 EMC1Q8N766 993 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 SLC4A11Q8NBS3 891 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 SPDYE1Q8NFV5 336 aaPredicted RBP17.31■□□□□ 0.36
CTSB-228ENST00000533455 UCMAQ8WVF2 138 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 TEKT4Q8WW24 435 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 CPXM1Q96SM3 734 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 IQCGQ9H095 443 aaKnown RBP17.31■□□□□ 0.36
CTSB-228ENST00000533455 C2orf71A6NGG8 1288 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 ERBB2P04626 1255 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 SNRPAP09012 282 aaKnown RBP17.31■□□□□ 0.36
CTSB-228ENST00000533455 GSTA2P09210 222 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 YWHAZP63104 245 aaKnown RBP17.31■□□□□ 0.36
CTSB-228ENST00000533455 TAF5Q15542 800 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 ATG16L1Q676U5 607 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 DARS2Q6PI48 645 aaKnown RBP17.31■□□□□ 0.36
CTSB-228ENST00000533455 CDHR3Q6ZTQ4 885 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 ZBTB33Q86T24 672 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 PRPF39Q86UA1 669 aaKnown RBP17.31■□□□□ 0.36
CTSB-228ENST00000533455 ALYREFQ86V81 257 aaKnown RBP17.31■□□□□ 0.36
CTSB-228ENST00000533455 RAB3IL1Q8TBN0 382 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 MCRS1Q96EZ8 462 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 ZNF277Q9NRM2 450 aaPredicted RBP17.31■□□□□ 0.36
CTSB-228ENST00000533455 DLGAP2Q9P1A6 1054 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 SIRPGQ9P1W8 387 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 PCSK1NQ9UHG2 260 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 SCOCQ9UIL1 159 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 ANGPTL2Q9UKU9 493 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 PLLPQ9Y342 182 aa17.31■□□□□ 0.36
CTSB-228ENST00000533455 MAP3K7O43318 606 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 KRT37O76014 449 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 UPP2O95045 317 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 CD19P15391 556 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 PRKCHP24723 683 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 GABRB2P47870 512 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 NRLP54845 237 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 THOC5Q13769 683 aaKnown RBP17.3■□□□□ 0.36
CTSB-228ENST00000533455 HSF5Q4G112 596 aaPredicted RBP17.3■□□□□ 0.36
CTSB-228ENST00000533455 NET1Q7Z628 596 aaPredicted RBP17.3■□□□□ 0.36
CTSB-228ENST00000533455 HSPH1Q92598 858 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 FAF2Q96CS3 445 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 RTP4Q96DX8 246 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 ACO2Q99798 780 aaKnown RBP17.3■□□□□ 0.36
CTSB-228ENST00000533455 ACAD9Q9H845 621 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 POPDC2Q9HBU9 364 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 PAK5Q9P286 719 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 ARMCX1Q9P291 453 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 USP18Q9UMW8 372 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 PLA2G4CQ9UP65 541 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 TRDMT1O14717 391 aaKnown RBP17.3■□□□□ 0.36
CTSB-228ENST00000533455 MAFO75444 373 aaPredicted RBP17.3■□□□□ 0.36
CTSB-228ENST00000533455 RNF8O76064 485 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 BACE1P56817 501 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 BST1Q10588 318 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 TFDP2Q14188 446 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 TBCCQ15814 346 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 GSTA3Q16772 222 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 TEX44Q53QW1 395 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 FAM47CQ5HY64 1035 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 SLC30A9Q6PML9 568 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 NPNTQ6UXI9 565 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 TREML1Q86YW5 311 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 SMC1BQ8NDV3 1235 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 CALN1Q9BXU9 219 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 BCO2Q9BYV7 579 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 WWP1Q9H0M0 922 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 MYOZ2Q9NPC6 264 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 KRT82Q9NSB4 513 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 ASNSD1Q9NWL6 643 aa17.3■□□□□ 0.36
CTSB-228ENST00000533455 B2RBV5 119 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 MAP3K13O43283 966 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 SMIM24O75264 130 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 MAGEA6P43360 314 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 MRPS5P82675 430 aaKnown RBP17.29■□□□□ 0.36
CTSB-228ENST00000533455 TMEM132BQ14DG7 1078 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 TRMT5Q32P41 509 aaKnown RBP17.29■□□□□ 0.36
CTSB-228ENST00000533455 LGSNQ5TDP6 509 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 PAXIP1Q6ZW49 1069 aaPredicted RBP17.29■□□□□ 0.36
CTSB-228ENST00000533455 PPM1NQ8N819 430 aa17.29■□□□□ 0.36
CTSB-228ENST00000533455 DTX3LQ8TDB6 740 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms