RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 SELENOSQ9BQE4 189 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.16□□□□□ -1.26
BDNF-217ENST00000533131 CYP4F12Q9HCS2 524 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 CCM2LQ9NUG4 571 aaPredicted RBP7.16□□□□□ -1.26
BDNF-217ENST00000533131 ATPIF1Q9UII2 106 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 CARD8Q9Y2G2 431 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 FNDC3AQ9Y2H6 1198 aaKnown RBP7.16□□□□□ -1.26
BDNF-217ENST00000533131 PCDHB12Q9Y5F1 795 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 TCRBV16S1A1N1A0A5B0 115 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 EXTL3O43909 919 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 AKR7A3O95154 331 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 KCNK5O95279 499 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 TPOP07202 933 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 ABCD3P28288 659 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 CAPZA2P47755 286 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 NR2C2P49116 596 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 MNAT1P51948 309 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 KCNQ4P56696 695 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 ANTXR2P58335 489 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 ACY1Q03154 408 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 STK11Q15831 433 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 ATXN7L2Q5T6C5 722 aaPredicted RBP7.16□□□□□ -1.26
BDNF-217ENST00000533131 SFMBT2Q5VUG0 894 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 WDR93Q6P2C0 686 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 PRR23CQ6ZRP0 262 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 CACNA2D4Q7Z3S7 1137 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 CDH24Q86UP0 819 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 MLKLQ8NB16 471 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 FBXO15Q8NCQ5 510 aaPredicted RBP7.16□□□□□ -1.26
BDNF-217ENST00000533131 TMPRSS4Q9NRS4 437 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 ZMYM6O95789 1325 aa7.16□□□□□ -1.26
BDNF-217ENST00000533131 COL15A1P39059 1388 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 MED1Q15648 1581 aaPredicted RBP7.15□□□□□ -1.26
BDNF-217ENST00000533131 PPP6R2O75170 966 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 INHAP05111 366 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 SCG2P13521 617 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 CTSSP25774 331 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 KRT2P35908 639 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 RFX5P48382 616 aaPredicted RBP7.15□□□□□ -1.26
BDNF-217ENST00000533131 ASIC1P78348 528 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 MAP3K10Q02779 954 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 MPP2Q14168 576 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 GALNT3Q14435 633 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 HLFQ16534 295 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 TAZQ16635 292 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 SMU1Q2TAY7 513 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 HDXQ7Z353 690 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 KCNN1Q92952 543 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 NAPGQ99747 312 aaPredicted RBP7.15□□□□□ -1.26
BDNF-217ENST00000533131 TDRD1Q9BXT4 1180 aaKnown RBP7.15□□□□□ -1.26
BDNF-217ENST00000533131 RNF41Q9H4P4 317 aaPredicted RBP7.15□□□□□ -1.26
BDNF-217ENST00000533131 FAM153AQ9UHL3 310 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 FEM1BQ9UK73 627 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 NEDD4P46934 1319 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 SH3TC1Q8TE82 1336 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 A0A0U1RQJ8 604 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 DENND3A2RUS2 1198 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 CIB2O75838 187 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 TSPAN9O75954 239 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 TARSP26639 723 aaKnown RBP7.15□□□□□ -1.26
BDNF-217ENST00000533131 EEF1DP29692 281 aaKnown RBP7.15□□□□□ -1.26
BDNF-217ENST00000533131 GYG1P46976 350 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 CAMLGP49069 296 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 IDH3AP50213 366 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 FOXO4P98177 505 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 SLC14A1Q13336 389 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 MPEG1Q2M385 716 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 ARSJQ5FYB0 599 aaPredicted RBP7.15□□□□□ -1.26
BDNF-217ENST00000533131 TMEM240Q5SV17 173 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 SLC2A7Q6PXP3 512 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 GPR161Q8N6U8 529 aaKnown RBP7.15□□□□□ -1.26
BDNF-217ENST00000533131 CEP112Q8N8E3 955 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 IFT81Q8WYA0 676 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 GPKOWQ92917 476 aaPredicted RBP eCLIP7.15□□□□□ -1.26
BDNF-217ENST00000533131 THOC1Q96FV9 657 aaKnown RBP7.15□□□□□ -1.26
BDNF-217ENST00000533131 PHF20Q9BVI0 1012 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 GBP3Q9H0R5 595 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 RASSF4Q9H2L5 321 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 TTYH1Q9H313 450 aaPredicted RBP7.15□□□□□ -1.26
BDNF-217ENST00000533131 MLXIPQ9HAP2 919 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 TFCP2L1Q9NZI6 479 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 TEKT2Q9UIF3 430 aa7.15□□□□□ -1.26
BDNF-217ENST00000533131 NIP7Q9Y221 180 aaKnown RBP eCLIP7.15□□□□□ -1.26
BDNF-217ENST00000533131 USP32Q8NFA0 1604 aa7.15□□□□□ -1.27
BDNF-217ENST00000533131 RNF103-CHMP3A0A140T963 221 aa7.15□□□□□ -1.27
BDNF-217ENST00000533131 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.15□□□□□ -1.27
BDNF-217ENST00000533131 RNF103O00237 685 aa7.15□□□□□ -1.27
BDNF-217ENST00000533131 KRT86O43790 486 aa7.15□□□□□ -1.27
BDNF-217ENST00000533131 ATP5HO75947 161 aa7.15□□□□□ -1.27
BDNF-217ENST00000533131 MPOP05164 745 aa7.15□□□□□ -1.27
BDNF-217ENST00000533131 HMBSP08397 361 aa7.15□□□□□ -1.27
BDNF-217ENST00000533131 UQCRFS1P1P0C7P4 283 aa7.15□□□□□ -1.27
BDNF-217ENST00000533131 RPS2P15880 293 aaKnown RBP7.15□□□□□ -1.27
BDNF-217ENST00000533131 S100A5P33763 92 aa7.15□□□□□ -1.27
BDNF-217ENST00000533131 ACTR1AP61163 376 aa7.15□□□□□ -1.27
BDNF-217ENST00000533131 CYP27A1Q02318 531 aa7.15□□□□□ -1.27
BDNF-217ENST00000533131 PTK6Q13882 451 aa7.15□□□□□ -1.27
BDNF-217ENST00000533131 SPRED3Q2MJR0 410 aa7.15□□□□□ -1.27
BDNF-217ENST00000533131 RAB11FIP2Q7L804 512 aa7.15□□□□□ -1.27
BDNF-217ENST00000533131 TEKT4Q8WW24 435 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms