RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 ZFRQ96KR1 1074 aaKnown RBP16.75■□□□□ 0.27
LDLRAD3-205ENST00000532490 HNRNPABQ99729 332 aaKnown RBP16.75■□□□□ 0.27
LDLRAD3-205ENST00000532490 P2RY13Q9BPV8 354 aa16.75■□□□□ 0.27
LDLRAD3-205ENST00000532490 IMPG2Q9BZV3 1241 aa16.75■□□□□ 0.27
LDLRAD3-205ENST00000532490 NIF3L1Q9GZT8 377 aa16.75■□□□□ 0.27
LDLRAD3-205ENST00000532490 MMRN2Q9H8L6 949 aa16.75■□□□□ 0.27
LDLRAD3-205ENST00000532490 FAM49BQ9NUQ9 324 aa16.75■□□□□ 0.27
LDLRAD3-205ENST00000532490 SMG5Q9UPR3 1016 aaKnown RBP16.75■□□□□ 0.27
LDLRAD3-205ENST00000532490 CHURC1-FNTBB4DL54 471 aa16.74■□□□□ 0.27
LDLRAD3-205ENST00000532490 HHLA1C9JL84 531 aa16.74■□□□□ 0.27
LDLRAD3-205ENST00000532490 COCHO43405 550 aa16.74■□□□□ 0.27
LDLRAD3-205ENST00000532490 SMC2O95347 1197 aa16.74■□□□□ 0.27
LDLRAD3-205ENST00000532490 FNTBP49356 437 aa16.74■□□□□ 0.27
LDLRAD3-205ENST00000532490 PGFP49763 221 aa16.74■□□□□ 0.27
LDLRAD3-205ENST00000532490 MAP3K7CLP57077 242 aa16.74■□□□□ 0.27
LDLRAD3-205ENST00000532490 CLEC20AQ6ZU45 233 aa16.74■□□□□ 0.27
LDLRAD3-205ENST00000532490 CD101Q93033 1021 aa16.74■□□□□ 0.27
LDLRAD3-205ENST00000532490 SMARCE1Q969G3 411 aa16.74■□□□□ 0.27
LDLRAD3-205ENST00000532490 FAXDC2Q96IV6 333 aa16.74■□□□□ 0.27
LDLRAD3-205ENST00000532490 NT5C1AQ9BXI3 368 aa16.74■□□□□ 0.27
LDLRAD3-205ENST00000532490 SMPD4Q9NXE4 827 aa16.74■□□□□ 0.27
LDLRAD3-205ENST00000532490 GMIPQ9P107 970 aa16.74■□□□□ 0.27
LDLRAD3-205ENST00000532490 MYO16Q9Y6X6 1858 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 HRO43593 1189 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 RNF40O75150 1001 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 NFATC1O95644 943 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 EPB41P11171 864 aaKnown RBP16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 MBL2P11226 248 aaPredicted RBP16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 OPRD1P41143 372 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 MXI1P50539 228 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 TUBP50607 506 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 NR1H3Q13133 447 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 GPRIN1Q7Z2K8 1008 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 FILIP1Q7Z7B0 1213 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 LONP2Q86WA8 852 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 FBXL13Q8NEE6 735 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 CYFIP2Q96F07 1278 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 CCSER2Q9H7U1 834 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 RAB20Q9NX57 234 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 COQ4Q9Y3A0 265 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 MYOFQ9NZM1 2061 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 KIAA1549LQ6ZVL6 1849 aa16.73■□□□□ 0.27
LDLRAD3-205ENST00000532490 TRIM49BA6NDI0 452 aa16.72■□□□□ 0.27
LDLRAD3-205ENST00000532490 SLC16A3O15427 465 aaKnown RBP16.72■□□□□ 0.27
LDLRAD3-205ENST00000532490 CYP17A1P05093 508 aa16.72■□□□□ 0.27
LDLRAD3-205ENST00000532490 FAM200BP0CF97 657 aa16.72■□□□□ 0.27
LDLRAD3-205ENST00000532490 CD58P19256 250 aa16.72■□□□□ 0.27
LDLRAD3-205ENST00000532490 ADORA2BP29275 332 aa16.72■□□□□ 0.27
LDLRAD3-205ENST00000532490 FKBP3Q00688 224 aaKnown RBP16.72■□□□□ 0.27
LDLRAD3-205ENST00000532490 FBXO43Q4G163 708 aa16.72■□□□□ 0.27
LDLRAD3-205ENST00000532490 CBWD6Q4V339 395 aa16.72■□□□□ 0.27
LDLRAD3-205ENST00000532490 CBWD3Q5JTY5 395 aa16.72■□□□□ 0.27
LDLRAD3-205ENST00000532490 CBWD5Q5RIA9 395 aa16.72■□□□□ 0.27
LDLRAD3-205ENST00000532490 HECTD3Q5T447 861 aa16.72■□□□□ 0.27
LDLRAD3-205ENST00000532490 KIAA2013Q8IYS2 634 aa16.72■□□□□ 0.27
LDLRAD3-205ENST00000532490 TATDN2Q93075 761 aa16.72■□□□□ 0.27
LDLRAD3-205ENST00000532490 GTPBP4Q9BZE4 634 aaKnown RBP16.72■□□□□ 0.27
LDLRAD3-205ENST00000532490 FBXO44Q9H4M3 255 aa16.72■□□□□ 0.27
LDLRAD3-205ENST00000532490 CFAP97Q9P2B7 532 aa16.72■□□□□ 0.27
LDLRAD3-205ENST00000532490 E2F8A0AVK6 867 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 SLC9A3R1O14745 358 aaPredicted RBP16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 SCAMP3O14828 347 aaKnown RBP16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 STX10O60499 249 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 ATG13O75143 517 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 CD44P16070 742 aaKnown RBP16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 BMP6P22004 513 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 TGM1P22735 817 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 CNR2P34972 360 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 LRRC63Q05C16 580 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 SRSF5Q13243 272 aaKnown RBP16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 DHCR24Q15392 516 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 PPP1R26Q5T8A7 1209 aaPredicted RBP16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 HEATR6Q6AI08 1181 aaKnown RBP16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 RHBDF2Q6PJF5 856 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 WDR5BQ86VZ2 330 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 DDX42Q86XP3 938 aaKnown RBP eCLIP16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 CCDC150Q8NCX0 1101 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 WBP2Q969T9 261 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 EXOC4Q96A65 974 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 TSG101Q99816 390 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 ARID3AQ99856 593 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 DUSP9Q99956 384 aaKnown RBP16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 HINFPQ9BQA5 517 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 PNPLA8Q9NP80 782 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 POLR3BQ9NW08 1133 aaPredicted RBP16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 NCDNQ9UBB6 729 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 MAN1B1Q9UKM7 699 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 SCML2Q9UQR0 700 aa16.71■□□□□ 0.27
LDLRAD3-205ENST00000532490 DNAH14Q0VDD8 3507 aa16.7■□□□□ 0.26
LDLRAD3-205ENST00000532490 K7EQS6 105 aa16.7■□□□□ 0.26
LDLRAD3-205ENST00000532490 GADD45BO75293 160 aaPredicted RBP16.7■□□□□ 0.26
LDLRAD3-205ENST00000532490 ISM2Q6H9L7 571 aa16.7■□□□□ 0.26
LDLRAD3-205ENST00000532490 SLC4A11Q8NBS3 891 aa16.7■□□□□ 0.26
LDLRAD3-205ENST00000532490 SLC35C1Q96A29 364 aa16.7■□□□□ 0.26
LDLRAD3-205ENST00000532490 DHTKD1Q96HY7 919 aaPredicted RBP16.7■□□□□ 0.26
LDLRAD3-205ENST00000532490 DUSP16Q9BY84 665 aa16.7■□□□□ 0.26
LDLRAD3-205ENST00000532490 FAM124BQ9H5Z6 455 aaPredicted RBP16.7■□□□□ 0.26
LDLRAD3-205ENST00000532490 TLR8Q9NR97 1041 aaKnown RBP16.7■□□□□ 0.26
LDLRAD3-205ENST00000532490 CISHQ9NSE2 258 aa16.7■□□□□ 0.26
LDLRAD3-205ENST00000532490 OSER1Q9NX31 292 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms