RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 TRIM10Q9UDY6 481 aa18.9■□□□□ 0.62
PPP1CA-208ENST00000532446 CHORDC1Q9UHD1 332 aaPredicted RBP18.9■□□□□ 0.62
PPP1CA-208ENST00000532446 DUSP10Q9Y6W6 482 aa18.9■□□□□ 0.62
PPP1CA-208ENST00000532446 A0A0A6YYK5 440 aaPredicted RBP18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 FBXO21O94952 628 aa18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 EPCAMP16422 314 aa18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 SCNN1AP37088 669 aa18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 TWF1Q12792 350 aa18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 MAMLD1Q13495 774 aa18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 PM20D1Q6GTS8 502 aa18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 DENND5BQ6ZUT9 1274 aa18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 RTL10Q7L3V2 364 aa18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 RBM23Q86U06 439 aaKnown RBP18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 STKLD1Q8NE28 680 aa18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 SLC7A14Q8TBB6 771 aa18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 GIPC2Q8TF65 315 aa18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 CLEC4CQ8WTT0 213 aa18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 PIWIL1Q96J94 861 aaKnown RBP18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 TSGA10Q9BZW7 698 aa18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 PARVAQ9NVD7 372 aa18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 COMMD8Q9NX08 183 aa18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 LMCD1Q9NZU5 365 aa18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 SALL4Q9UJQ4 1053 aa18.89■□□□□ 0.61
PPP1CA-208ENST00000532446 SLC38A8A6NNN8 435 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 GOLGA8SH3BPF8 625 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 CCP110O43303 1012 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 KRT86O43790 486 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 RTN3O95197 1032 aaPredicted RBP18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 ZBED1O96006 694 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 C8AP07357 584 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 NRIP1P48552 1158 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 DAOAP59103 153 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 USP46P62068 366 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 MRPS5P82675 430 aaKnown RBP18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 SLC6A3Q01959 620 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 PPP1R15BQ5SWA1 713 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 DNAJC24Q6P3W2 148 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 BHLHA9Q7RTU4 235 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 RHOT2Q8IXI1 618 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 SLC35G2Q8TBE7 412 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 HDAC7Q8WUI4 952 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 NUP85Q9BW27 656 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 FBXO44Q9H4M3 255 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 PRDM12Q9H4Q4 367 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 MRPL47Q9HD33 250 aaKnown RBP18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 LZTFL1Q9NQ48 299 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 UVRAGQ9P2Y5 699 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 HCFC2Q9Y5Z7 792 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 SCINQ9Y6U3 715 aa18.88■□□□□ 0.61
PPP1CA-208ENST00000532446 FAM92AA1XBS5 289 aa18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 SIGLEC16A6NMB1 481 aa18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 USP17L7P0C7H9 530 aa18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 EPHB3P54753 998 aa18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 PLD1Q13393 1074 aa18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 MTMR3Q13615 1198 aa18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 GRIN2CQ14957 1233 aa18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 FAM102AQ5T9C2 384 aaPredicted RBP18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 SLC26A9Q7LBE3 791 aa18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 ZSCAN30Q86W11 494 aa18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 C17orf53Q8N3J3 647 aaPredicted RBP18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 IRGQQ8WZA9 623 aa18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 NDRG1Q92597 394 aaKnown RBP18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 KHSRPQ92945 711 aaKnown RBP eCLIP18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 CDCA3Q99618 268 aaPredicted RBP18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 CDX2Q99626 313 aaPredicted RBP18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 TTLL2Q9BWV7 592 aa18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 NSUN3Q9H649 340 aaKnown RBP18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 OSGEPQ9NPF4 335 aa18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 MAN1C1Q9NR34 630 aa18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 CTTNBP2NLQ9P2B4 639 aa18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 COG5Q9UP83 839 aa18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 SCML2Q9UQR0 700 aa18.87■□□□□ 0.61
PPP1CA-208ENST00000532446 GOLGA6L9A6NEM1 432 aa18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 SART1O43290 800 aaKnown RBP18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 MTA2O94776 668 aa18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 GJB6O95452 261 aa18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 CSH1P0DML2 217 aa18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 CSH2P0DML3 217 aa18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 KRT3P12035 628 aa18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 YWHAQP27348 245 aa18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 HADHBP55084 474 aaKnown RBP18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 KCNC3Q14003 757 aa18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 VEPH1Q14D04 833 aa18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 ARHGAP29Q52LW3 1261 aa18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 EFHC1Q5JVL4 640 aa18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 PPP2R3CQ969Q6 453 aa18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 SELENOOQ9BVL4 669 aa18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 METTL5Q9NRN9 209 aaKnown RBP18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 DPP7Q9UHL4 492 aa18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 TMEM59LQ9UK28 342 aa18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 ASB3Q9Y575 518 aa18.86■□□□□ 0.61
PPP1CA-208ENST00000532446 ZMYND10O75800 440 aa18.85■□□□□ 0.61
PPP1CA-208ENST00000532446 LRG1P02750 347 aa18.85■□□□□ 0.61
PPP1CA-208ENST00000532446 GLI1P08151 1106 aa18.85■□□□□ 0.61
PPP1CA-208ENST00000532446 HMGA1P17096 107 aaKnown RBP18.85■□□□□ 0.61
PPP1CA-208ENST00000532446 HOXA9P31269 272 aa18.85■□□□□ 0.61
PPP1CA-208ENST00000532446 RPL7AP62424 266 aaKnown RBP18.85■□□□□ 0.61
PPP1CA-208ENST00000532446 IFRD2Q12894 506 aaPredicted RBP18.85■□□□□ 0.61
PPP1CA-208ENST00000532446 TAF5Q15542 800 aa18.85■□□□□ 0.61
PPP1CA-208ENST00000532446 FEZF2Q8TBJ5 459 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms