RNA–Protein interactions for RNA: ENST00000532044.1

AP003040.1-201, humanhuman

BASIC

Gene AP003040.1, Length 1,024 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003040.1-201ENST00000532044 COCHO43405 550 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 ASS1P00966 412 aaKnown RBP13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 ASPAP45381 313 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 TUBP50607 506 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 SLC5A3P53794 718 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 NCOA4Q13772 614 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 DHCR24Q15392 516 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 ZNF699Q32M78 642 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 KMT5BQ4FZB7 885 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 ETFBKMTQ8IXQ9 262 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 NUP93Q8N1F7 819 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 CRYBG2Q8N1P7 616 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 OLIG1Q8TAK6 271 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 TMC2Q8TDI7 906 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 WBP2Q969T9 261 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 SMOQ99835 787 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 FAM13BQ9NYF5 915 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 CFAP97Q9P2B7 532 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 NXF1Q9UBU9 619 aaKnown RBP13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 MMP17Q9ULZ9 603 aa13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 R3HCC1Q9Y3T6 440 aaKnown RBP13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 TNRC6BQ9UPQ9 1833 aaKnown RBP13.53□□□□□ -0.24
AP003040.1-201ENST00000532044 DCLK1O15075 740 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 RTN3O95197 1032 aaPredicted RBP13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 PFKFB1P16118 471 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 CMA1P23946 247 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 YWHAQP27348 245 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 MPLP40238 635 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 KIR2DL1P43626 348 aaPredicted RBP13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 INCA1Q0VD86 236 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 NR1H3Q13133 447 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 TRPC3Q13507 836 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 CCDC6Q16204 474 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 NFIL3Q16649 462 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 PPM1JQ5JR12 505 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 PDZD8Q8NEN9 1154 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 EXOC4Q96A65 974 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 CHAMP1Q96JM3 812 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 CNOT6LQ96LI5 555 aaKnown RBP13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 CNTNAP3BQ96NU0 1288 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 SLITRK1Q96PX8 696 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 CNTNAP3Q9BZ76 1288 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 SMOC1Q9H4F8 434 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 DMAP1Q9NPF5 467 aaPredicted RBP13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 SMPD4Q9NXE4 827 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 HCN2Q9UL51 889 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 TRAF3IP3Q9Y228 551 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 NUP205Q92621 2012 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 ZFYVE26Q68DK2 2539 aa13.52□□□□□ -0.25
AP003040.1-201ENST00000532044 E2F8A0AVK6 867 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 BCLAF3A2AJT9 711 aaKnown RBP13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 HHLA1C9JL84 531 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 SCAMP3O14828 347 aaKnown RBP13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 MAPK13O15264 365 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 BEST1O76090 585 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 NR3C1P04150 777 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 MYL1P05976 194 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 CCDC192P0DO97 292 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 SLC6A11P48066 632 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 ZCWPW2Q504Y3 356 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 ZNF667Q5HYK9 610 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 PMS2CLQ68D20 193 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 TMEM92Q6UXU6 159 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 SCARA5Q6ZMJ2 495 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 SV2AQ7L0J3 742 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 DDX42Q86XP3 938 aaKnown RBP eCLIP13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 IL17RCQ8NAC3 791 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 MDGA1Q8NFP4 955 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 FBXO32Q969P5 355 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 SMARCD1Q96GM5 515 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 CCSER2Q9H7U1 834 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 CD248Q9HCU0 757 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 EXOC1Q9NV70 894 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 COMMD8Q9NX08 183 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 CFAP45Q9UL16 551 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 SPEGQ15772 3267 aa13.51□□□□□ -0.25
AP003040.1-201ENST00000532044 A0A1B0GVL5 298 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 SLC9A3R1O14745 358 aaPredicted RBP13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 IKBKBO14920 756 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 HOXC11O43248 304 aaPredicted RBP13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 ADAM23O75077 832 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 RHOBTB3O94955 611 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 CCDC130P13994 396 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 BCKDHBP21953 392 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 NDST1P52848 882 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 MRPS21P82921 87 aaKnown RBP13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 BIRC3Q13489 604 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 CRY1Q16526 586 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 LY6G5CQ5SRR4 150 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 STPG1Q5TH74 334 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 TCEAL6Q6IPX3 200 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 GPRIN1Q7Z2K8 1008 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 ACOT1Q86TX2 421 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 UNC93AQ86WB7 457 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 HSCBQ8IWL3 235 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 CEP57L1Q8IYX8 460 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 TTC16Q8NEE8 873 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 CCDC26Q8TAB7 109 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 TAF4BQ92750 862 aa13.5□□□□□ -0.25
AP003040.1-201ENST00000532044 TCEAL3Q969E4 200 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms