RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 SNX25Q9H3E2 840 aa18.44■□□□□ 0.54
PKP3-208ENST00000531857 ARHGEF4Q9NR80 690 aa18.44■□□□□ 0.54
PKP3-208ENST00000531857 EHD2Q9NZN4 543 aa18.44■□□□□ 0.54
PKP3-208ENST00000531857 EVLQ9UI08 416 aaPredicted RBP18.44■□□□□ 0.54
PKP3-208ENST00000531857 WDFY3Q8IZQ1 3526 aa18.44■□□□□ 0.54
PKP3-208ENST00000531857 CLDN5O00501 218 aa18.43■□□□□ 0.54
PKP3-208ENST00000531857 TNFRSF10BO14763 440 aa18.43■□□□□ 0.54
PKP3-208ENST00000531857 MBL2P11226 248 aaPredicted RBP18.43■□□□□ 0.54
PKP3-208ENST00000531857 ADH5P11766 374 aa18.43■□□□□ 0.54
PKP3-208ENST00000531857 PTPN1P18031 435 aaKnown RBP18.43■□□□□ 0.54
PKP3-208ENST00000531857 EIF2DP41214 584 aaKnown RBP18.43■□□□□ 0.54
PKP3-208ENST00000531857 MAP7D1Q3KQU3 841 aa18.43■□□□□ 0.54
PKP3-208ENST00000531857 TDRD10Q5VZ19 366 aaKnown RBP18.43■□□□□ 0.54
PKP3-208ENST00000531857 CCDC65Q8IXS2 484 aa18.43■□□□□ 0.54
PKP3-208ENST00000531857 PHTF2Q8N3S3 785 aa18.43■□□□□ 0.54
PKP3-208ENST00000531857 PDILTQ8N807 584 aa18.43■□□□□ 0.54
PKP3-208ENST00000531857 RDH13Q8NBN7 331 aa18.43■□□□□ 0.54
PKP3-208ENST00000531857 GATA6Q92908 595 aa18.43■□□□□ 0.54
PKP3-208ENST00000531857 B3GNT5Q9BYG0 378 aa18.43■□□□□ 0.54
PKP3-208ENST00000531857 BCCIPQ9P287 314 aaKnown RBP eCLIP18.43■□□□□ 0.54
PKP3-208ENST00000531857 ATXN2Q99700 1313 aaKnown RBP18.43■□□□□ 0.54
PKP3-208ENST00000531857 PCDH15Q96QU1 1955 aa18.42■□□□□ 0.54
PKP3-208ENST00000531857 CACNA1EQ15878 2313 aa18.42■□□□□ 0.54
PKP3-208ENST00000531857 TACC1O75410 805 aa18.42■□□□□ 0.54
PKP3-208ENST00000531857 ADH1CP00326 375 aa18.42■□□□□ 0.54
PKP3-208ENST00000531857 DLATP10515 647 aaKnown RBP18.42■□□□□ 0.54
PKP3-208ENST00000531857 ENGP17813 658 aa18.42■□□□□ 0.54
PKP3-208ENST00000531857 GRIA2P42262 883 aa18.42■□□□□ 0.54
PKP3-208ENST00000531857 LMAN2Q12907 356 aa18.42■□□□□ 0.54
PKP3-208ENST00000531857 EOGTQ5NDL2 527 aa18.42■□□□□ 0.54
PKP3-208ENST00000531857 LY6G5CQ5SRR4 150 aa18.42■□□□□ 0.54
PKP3-208ENST00000531857 KIAA1211LQ6NV74 962 aa18.42■□□□□ 0.54
PKP3-208ENST00000531857 SYT12Q8IV01 421 aa18.42■□□□□ 0.54
PKP3-208ENST00000531857 ZFRQ96KR1 1074 aaKnown RBP18.42■□□□□ 0.54
PKP3-208ENST00000531857 SPACA7Q96KW9 195 aa18.42■□□□□ 0.54
PKP3-208ENST00000531857 SLITRK1Q96PX8 696 aa18.42■□□□□ 0.54
PKP3-208ENST00000531857 NUSAP1Q9BXS6 441 aaKnown RBP18.42■□□□□ 0.54
PKP3-208ENST00000531857 POLMQ9NP87 494 aaPredicted RBP18.42■□□□□ 0.54
PKP3-208ENST00000531857 FSCN3Q9NQT6 498 aa18.42■□□□□ 0.54
PKP3-208ENST00000531857 TCRBV21S2A2A0A5A6 115 aa18.41■□□□□ 0.54
PKP3-208ENST00000531857 TNNI1P19237 187 aa18.41■□□□□ 0.54
PKP3-208ENST00000531857 ITPKAP23677 461 aa18.41■□□□□ 0.54
PKP3-208ENST00000531857 TNFRSF4P43489 277 aa18.41■□□□□ 0.54
PKP3-208ENST00000531857 SNRNP35Q16560 246 aaKnown RBP18.41■□□□□ 0.54
PKP3-208ENST00000531857 WDR72Q3MJ13 1102 aa18.41■□□□□ 0.54
PKP3-208ENST00000531857 HSF5Q4G112 596 aaPredicted RBP18.41■□□□□ 0.54
PKP3-208ENST00000531857 CLEC17AQ6ZS10 378 aa18.41■□□□□ 0.54
PKP3-208ENST00000531857 PGBD3Q8N328 593 aa18.41■□□□□ 0.54
PKP3-208ENST00000531857 NAT16Q8N8M0 369 aa18.41■□□□□ 0.54
PKP3-208ENST00000531857 ZNF516Q92618 1163 aa18.41■□□□□ 0.54
PKP3-208ENST00000531857 USP28Q96RU2 1077 aa18.41■□□□□ 0.54
PKP3-208ENST00000531857 KCNK16Q96T55 309 aa18.41■□□□□ 0.54
PKP3-208ENST00000531857 ELOVL4Q9GZR5 314 aa18.41■□□□□ 0.54
PKP3-208ENST00000531857 CHORDC1Q9UHD1 332 aaPredicted RBP18.41■□□□□ 0.54
PKP3-208ENST00000531857 PILRBQ9UKJ0 227 aa18.41■□□□□ 0.54
PKP3-208ENST00000531857 E2F8A0AVK6 867 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 GOLGA6L22H0YM25 854 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 TGFB1I1O43294 461 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 COCHO43405 550 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 SYT1P21579 422 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 YWHAQP27348 245 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 SLC39A14Q15043 492 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 SLC23A3Q6PIS1 610 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 STXBP4Q6ZWJ1 553 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 EPM2AIP1Q7L775 607 aaPredicted RBP18.4■□□□□ 0.54
PKP3-208ENST00000531857 DDX42Q86XP3 938 aaKnown RBP eCLIP18.4■□□□□ 0.54
PKP3-208ENST00000531857 ETFBKMTQ8IXQ9 262 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 NUP93Q8N1F7 819 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 DEFB119Q8N690 84 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 B3GALNT2Q8NCR0 500 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 SCAMP5Q8TAC9 235 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 WBP2Q969T9 261 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 CCDC127Q96BQ5 260 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 CGRRF1Q99675 332 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 GZF1Q9H116 711 aaPredicted RBP18.4■□□□□ 0.54
PKP3-208ENST00000531857 KIAA1586Q9HCI6 787 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 TBC1D14Q9P2M4 693 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 HCN2Q9UL51 889 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 BAHCC1Q9P281 2608 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 ZFYVE26Q68DK2 2539 aa18.4■□□□□ 0.54
PKP3-208ENST00000531857 SPAARA0A1B0GVQ0 90 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 A8MXQ7 604 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.39■□□□□ 0.53
PKP3-208ENST00000531857 TRIM24O15164 1050 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 CLIC2O15247 247 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 HYAL3O43820 417 aaPredicted RBP18.39■□□□□ 0.53
PKP3-208ENST00000531857 TULP3O75386 442 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 FAM163BP0C2L3 166 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 HOXB3P14651 431 aaPredicted RBP18.39■□□□□ 0.53
PKP3-208ENST00000531857 PDCP20941 246 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 MYL6P60660 151 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 TNNC1P63316 161 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 GAD2Q05329 585 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 CYP24A1Q07973 514 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 PSMD6Q15008 389 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 PEAR1Q5VY43 1037 aaPredicted RBP18.39■□□□□ 0.53
PKP3-208ENST00000531857 LYSMD4Q5XG99 296 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 BBS7Q8IWZ6 715 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 ZNF507Q8TCN5 953 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 FBXO32Q969P5 355 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms