RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ZC3H10Q96K80 434 aaKnown RBP17.85■□□□□ 0.45
CPSF1-207ENST00000531727 COMMD8Q9NX08 183 aa17.85■□□□□ 0.45
CPSF1-207ENST00000531727 DCDC2BA2VCK2 349 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 K7EQS6 105 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 SLC30A4O14863 429 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 MAPK13O15264 365 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 COCHO43405 550 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 AP1G2O75843 785 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 RHOBTB3O94955 611 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 APBB3O95704 486 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 ASS1P00966 412 aaKnown RBP17.84■□□□□ 0.45
CPSF1-207ENST00000531727 PRR29P0C7W0 189 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 PIK3CAP42336 1068 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 DHCR24Q15392 516 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 NFIL3Q16649 462 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 C1orf220Q5T0J3 134 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 SNX30Q5VWJ9 437 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 CRYBG2Q8N1P7 616 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 USP33Q8TEY7 942 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 ARRDC1-AS1Q9H2J1 176 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 KRT82Q9NSB4 513 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 TBC1D14Q9P2M4 693 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 HMGXB4Q9UGU5 601 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 EBF1Q9UH73 591 aa17.84■□□□□ 0.45
CPSF1-207ENST00000531727 CHORDC1Q9UHD1 332 aaPredicted RBP17.84■□□□□ 0.45
CPSF1-207ENST00000531727 E2F8A0AVK6 867 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 FAM92AA1XBS5 289 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 SCAMP3O14828 347 aaKnown RBP17.83■□□□□ 0.44
CPSF1-207ENST00000531727 GDF9O60383 454 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 ADH1CP00326 375 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 HLA-DRAP01903 254 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 CCDC130P13994 396 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 NR2F2P24468 414 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 EIF2DP41214 584 aaKnown RBP17.83■□□□□ 0.44
CPSF1-207ENST00000531727 ASPAP45381 313 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 TUBP50607 506 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 VAMP7P51809 220 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 NDST1P52848 882 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 DPYDQ12882 1025 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 ORC1Q13415 861 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 HECTD3Q5T447 861 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 SPOPLQ6IQ16 392 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 UNC93AQ86WB7 457 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 ZMIZ2Q8NF64 920 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 SLC2A14Q8TDB8 520 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 ZFRQ96KR1 1074 aaKnown RBP17.83■□□□□ 0.44
CPSF1-207ENST00000531727 SMOQ99835 787 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 CSNK1G1Q9HCP0 422 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 PCDHGA5Q9Y5G8 931 aa17.83■□□□□ 0.44
CPSF1-207ENST00000531727 ZDHHC11BP0C7U3 371 aa17.82■□□□□ 0.44
CPSF1-207ENST00000531727 ZNF806P0C7X5 589 aa17.82■□□□□ 0.44
CPSF1-207ENST00000531727 ADH5P11766 374 aa17.82■□□□□ 0.44
CPSF1-207ENST00000531727 SEC13P55735 322 aa17.82■□□□□ 0.44
CPSF1-207ENST00000531727 PLK5Q496M5 336 aa17.82■□□□□ 0.44
CPSF1-207ENST00000531727 C2orf27AQ580R0 203 aa17.82■□□□□ 0.44
CPSF1-207ENST00000531727 RHBDF2Q6PJF5 856 aa17.82■□□□□ 0.44
CPSF1-207ENST00000531727 OTUB2Q96DC9 234 aa17.82■□□□□ 0.44
CPSF1-207ENST00000531727 PNKPQ96T60 521 aa17.82■□□□□ 0.44
CPSF1-207ENST00000531727 SCAND2PQ9GZW5 306 aaPredicted RBP17.82■□□□□ 0.44
CPSF1-207ENST00000531727 DUSP15Q9H1R2 295 aaPredicted RBP17.82■□□□□ 0.44
CPSF1-207ENST00000531727 CCSER2Q9H7U1 834 aa17.82■□□□□ 0.44
CPSF1-207ENST00000531727 GMIPQ9P107 970 aa17.82■□□□□ 0.44
CPSF1-207ENST00000531727 SPAG17Q6Q759 2223 aa17.82■□□□□ 0.44
CPSF1-207ENST00000531727 A0A1W2PQ27 194 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 A0A1W2PQ64 194 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 A0A1W2PQD8 194 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 BEST1O76090 585 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 TRIM21P19474 475 aaKnown RBP17.81■□□□□ 0.44
CPSF1-207ENST00000531727 SLC6A11P48066 632 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 DGKEP52429 567 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 MAP3K7CLP57077 242 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 MRPS21P82921 87 aaKnown RBP17.81■□□□□ 0.44
CPSF1-207ENST00000531727 ENPEPQ07075 957 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 INCA1Q0VD86 236 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 SF3A2Q15428 464 aaKnown RBP17.81■□□□□ 0.44
CPSF1-207ENST00000531727 ELF2Q15723 593 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 CCDC6Q16204 474 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 AASDHQ4L235 1098 aaPredicted RBP17.81■□□□□ 0.44
CPSF1-207ENST00000531727 PLA2G2CQ5R387 149 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 KRBA2Q6ZNG9 492 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 INTS8Q75QN2 995 aaKnown RBP17.81■□□□□ 0.44
CPSF1-207ENST00000531727 GUF1Q8N442 669 aaKnown RBP17.81■□□□□ 0.44
CPSF1-207ENST00000531727 C12orf29Q8N999 325 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 C12orf50Q8NA57 414 aaPredicted RBP17.81■□□□□ 0.44
CPSF1-207ENST00000531727 TSTD1Q8NFU3 115 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 DUSP9Q99956 384 aaKnown RBP17.81■□□□□ 0.44
CPSF1-207ENST00000531727 FBXO44Q9H4M3 255 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 FAM49BQ9NUQ9 324 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 MMP17Q9ULZ9 603 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 MAPK8IP1Q9UQF2 711 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 SH3BP1Q9Y3L3 701 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 ATP6V1DQ9Y5K8 247 aa17.81■□□□□ 0.44
CPSF1-207ENST00000531727 ANTXRLA6NF34 631 aa17.8■□□□□ 0.44
CPSF1-207ENST00000531727 RHOBTB1O94844 696 aa17.8■□□□□ 0.44
CPSF1-207ENST00000531727 KAT7O95251 611 aa17.8■□□□□ 0.44
CPSF1-207ENST00000531727 APODP05090 189 aa17.8■□□□□ 0.44
CPSF1-207ENST00000531727 FAM200BP0CF97 657 aa17.8■□□□□ 0.44
CPSF1-207ENST00000531727 TRIM49P0CI25 452 aa17.8■□□□□ 0.44
CPSF1-207ENST00000531727 TRIM49CP0CI26 452 aa17.8■□□□□ 0.44
CPSF1-207ENST00000531727 KRT13P13646 458 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms