RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 PCIF1Q9H4Z3 704 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 OLFML3Q9NRN5 406 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 SMPD4Q9NXE4 827 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 CPQQ9Y646 472 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 CLIC4Q9Y696 253 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 NUMA1Q14980 2115 aa9.82□□□□□ -0.84
CHMP4A-205ENST00000531158 F8VP50 259 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 H3BQV1 296 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 TNFRSF10BO14763 440 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 TRIM24O15164 1050 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 PRPF6O94906 941 aaKnown RBP9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 KAT7O95251 611 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 GCNT3O95395 438 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 PDGFRBP09619 1106 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 GARTP22102 1010 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 WARSP23381 471 aaKnown RBP9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 ITPKAP23677 461 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 PCSK1P29120 753 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 TIE1P35590 1138 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 MAPK8P45983 427 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 LHX1P48742 406 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 NOP14P78316 857 aaKnown RBP9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 MRPS21P82921 87 aaKnown RBP9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 RBP5P82980 135 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 KDSRQ06136 332 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 SEMA3BQ13214 749 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 VSTM1Q6UX27 236 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 DENND5BQ6ZUT9 1274 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 C11orf74Q86VG3 221 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 TTC30AQ86WT1 665 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 CBWD2Q8IUF1 395 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 ETFBKMTQ8IXQ9 262 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 KRI1Q8N9T8 703 aaKnown RBP9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 FSIP1Q8NA03 581 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 OR2I1PQ8NGU4 316 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 RASSF8Q8NHQ8 419 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 MYCBPAPQ8TBZ2 947 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 GPT2Q8TD30 523 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 HNRNPLLQ8WVV9 542 aaKnown RBP9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 HPDLQ96IR7 371 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 LRIG1Q96JA1 1093 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 ACCSQ96QU6 501 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 DPEP3Q9H4B8 488 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 CD248Q9HCU0 757 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 CD93Q9NPY3 652 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 INTS13Q9NVM9 706 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 MAGEC2Q9UBF1 373 aaPredicted RBP9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 SEL1LQ9UBV2 794 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 STK17AQ9UEE5 414 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 PILRBQ9UKJ0 227 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 CDH9Q9ULB4 789 aa9.81□□□□□ -0.84
CHMP4A-205ENST00000531158 MUC22E2RYF6 1773 aaPredicted RBP9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 CABIN1Q9Y6J0 2220 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 TENM4Q6N022 2769 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 TULP1O00294 542 aaPredicted RBP9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 CST3P01034 146 aaPredicted RBP9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 PRB1P04280 392 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 TMEM191BP0C7N4 346 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 ZSCAN22P10073 491 aaPredicted RBP9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 GAP43P17677 238 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 CLCN1P35523 988 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 GRIK1P39086 918 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 PGFP49763 221 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 CYP27A1Q02318 531 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 TAF10Q12962 218 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 NR1H3Q13133 447 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 MDH1BQ5I0G3 518 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 LY6G5CQ5SRR4 150 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 FAM173BQ6P4H8 233 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 SLC23A3Q6PIS1 610 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 C4orf50Q6ZRC1 276 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 DPH6Q7L8W6 267 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 SYT12Q8IV01 421 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 GPD1LQ8N335 351 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 WHAMMQ8TF30 809 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 CACTINQ8WUQ7 758 aaKnown RBP9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 HMGB4Q8WW32 186 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 EXOC4Q96A65 974 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 TRIM44Q96DX7 344 aaPredicted RBP9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 P2RY11Q96G91 374 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 C8orf48Q96LL4 319 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 PNKPQ96T60 521 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 HNRNPABQ99729 332 aaKnown RBP9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 TRIM9Q9C026 710 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 ZNF518BQ9C0D4 1074 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 TRPM5Q9NZQ8 1165 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 CFAP97Q9P2B7 532 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 SMC3Q9UQE7 1217 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 KIF3AQ9Y496 699 aa9.8□□□□□ -0.84
CHMP4A-205ENST00000531158 A0A1W2PQF6 199 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 TCRBV21S2A2A0A5A6 115 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 CLDN5O00501 218 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 STX6O43752 255 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 LDHAP00338 332 aaKnown RBP9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 F13A1P00488 732 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 ADH5P11766 374 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 PLA2G2AP14555 144 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 PFKLP17858 780 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 GABRG2P18507 467 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 EIF2DP41214 584 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms