RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 ARHGAP17Q68EM7 881 aa20.07■□□□□ 0.8
UBXN1-211ENST00000531056 CC2D1AQ6P1N0 951 aaPredicted RBP20.07■□□□□ 0.8
UBXN1-211ENST00000531056 NT5C1BQ96P26 610 aa20.07■□□□□ 0.8
UBXN1-211ENST00000531056 GBP4Q96PP9 640 aa20.07■□□□□ 0.8
UBXN1-211ENST00000531056 FBXO44Q9H4M3 255 aa20.07■□□□□ 0.8
UBXN1-211ENST00000531056 CHORDC1Q9UHD1 332 aaPredicted RBP20.07■□□□□ 0.8
UBXN1-211ENST00000531056 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.07■□□□□ 0.8
UBXN1-211ENST00000531056 LEFTY2O00292 366 aa20.06■□□□□ 0.8
UBXN1-211ENST00000531056 AFPP02771 609 aaKnown RBP20.06■□□□□ 0.8
UBXN1-211ENST00000531056 CHRNB1P11230 501 aa20.06■□□□□ 0.8
UBXN1-211ENST00000531056 HOXD11P31277 338 aaPredicted RBP20.06■□□□□ 0.8
UBXN1-211ENST00000531056 PGFP49763 221 aa20.06■□□□□ 0.8
UBXN1-211ENST00000531056 DPCR1Q3MIW9 517 aa20.06■□□□□ 0.8
UBXN1-211ENST00000531056 MAML2Q8IZL2 1156 aaPredicted RBP20.06■□□□□ 0.8
UBXN1-211ENST00000531056 JAKMIP2Q96AA8 810 aa20.06■□□□□ 0.8
UBXN1-211ENST00000531056 CNOT6LQ96LI5 555 aaKnown RBP20.06■□□□□ 0.8
UBXN1-211ENST00000531056 CHRDQ9H2X0 955 aa20.06■□□□□ 0.8
UBXN1-211ENST00000531056 DUS2Q9NX74 493 aaKnown RBP20.06■□□□□ 0.8
UBXN1-211ENST00000531056 SCML2Q9UQR0 700 aa20.06■□□□□ 0.8
UBXN1-211ENST00000531056 CPQQ9Y646 472 aa20.06■□□□□ 0.8
UBXN1-211ENST00000531056 WNT6Q9Y6F9 365 aa20.06■□□□□ 0.8
UBXN1-211ENST00000531056 COCHO43405 550 aa20.05■□□□□ 0.8
UBXN1-211ENST00000531056 ACO1P21399 889 aaKnown RBP20.05■□□□□ 0.8
UBXN1-211ENST00000531056 CETN1Q12798 172 aa20.05■□□□□ 0.8
UBXN1-211ENST00000531056 EML3Q32P44 896 aa20.05■□□□□ 0.8
UBXN1-211ENST00000531056 HECTD3Q5T447 861 aa20.05■□□□□ 0.8
UBXN1-211ENST00000531056 IRF2BP1Q8IU81 584 aa20.05■□□□□ 0.8
UBXN1-211ENST00000531056 ARHGEF19Q8IW93 802 aa20.05■□□□□ 0.8
UBXN1-211ENST00000531056 KIAA1958Q8N8K9 716 aa20.05■□□□□ 0.8
UBXN1-211ENST00000531056 EHBP1Q8NDI1 1231 aa20.05■□□□□ 0.8
UBXN1-211ENST00000531056 GPT2Q8TD30 523 aa20.05■□□□□ 0.8
UBXN1-211ENST00000531056 KAT5Q92993 513 aa20.05■□□□□ 0.8
UBXN1-211ENST00000531056 ZFRQ96KR1 1074 aaKnown RBP20.05■□□□□ 0.8
UBXN1-211ENST00000531056 CCSER2Q9H7U1 834 aa20.05■□□□□ 0.8
UBXN1-211ENST00000531056 SPATA6Q9NWH7 488 aaPredicted RBP20.05■□□□□ 0.8
UBXN1-211ENST00000531056 FANCMQ8IYD8 2048 aa20.04■□□□□ 0.8
UBXN1-211ENST00000531056 CYP26A1O43174 497 aa20.04■□□□□ 0.8
UBXN1-211ENST00000531056 MBL2P11226 248 aaPredicted RBP20.04■□□□□ 0.8
UBXN1-211ENST00000531056 NBL1P41271 181 aa20.04■□□□□ 0.8
UBXN1-211ENST00000531056 IFNAR2P48551 515 aa20.04■□□□□ 0.8
UBXN1-211ENST00000531056 KIF11P52732 1056 aa20.04■□□□□ 0.8
UBXN1-211ENST00000531056 PON2Q15165 354 aa20.04■□□□□ 0.8
UBXN1-211ENST00000531056 TTC30AQ86WT1 665 aa20.04■□□□□ 0.8
UBXN1-211ENST00000531056 PPM1KQ8N3J5 372 aa20.04■□□□□ 0.8
UBXN1-211ENST00000531056 TTC16Q8NEE8 873 aa20.04■□□□□ 0.8
UBXN1-211ENST00000531056 ATP2A3Q93084 1043 aa20.04■□□□□ 0.8
UBXN1-211ENST00000531056 IER2Q9BTL4 223 aa20.04■□□□□ 0.8
UBXN1-211ENST00000531056 ECT2Q9H8V3 914 aa20.04■□□□□ 0.8
UBXN1-211ENST00000531056 LMAN1LQ9HAT1 526 aa20.04■□□□□ 0.8
UBXN1-211ENST00000531056 TLR8Q9NR97 1041 aaKnown RBP20.04■□□□□ 0.8
UBXN1-211ENST00000531056 SMPD4Q9NXE4 827 aa20.04■□□□□ 0.8
UBXN1-211ENST00000531056 CACNA1IQ9P0X4 2223 aa20.03■□□□□ 0.8
UBXN1-211ENST00000531056 PROB1E7EW31 1015 aa20.03■□□□□ 0.8
UBXN1-211ENST00000531056 GCNT1Q02742 428 aa20.03■□□□□ 0.8
UBXN1-211ENST00000531056 MTAPQ13126 283 aa20.03■□□□□ 0.8
UBXN1-211ENST00000531056 SGO2Q562F6 1265 aa20.03■□□□□ 0.8
UBXN1-211ENST00000531056 CCDC186Q7Z3E2 898 aa20.03■□□□□ 0.8
UBXN1-211ENST00000531056 DDX42Q86XP3 938 aaKnown RBP eCLIP20.03■□□□□ 0.8
UBXN1-211ENST00000531056 CPA6Q8N4T0 437 aa20.03■□□□□ 0.8
UBXN1-211ENST00000531056 ANKRD52Q8NB46 1076 aa20.03■□□□□ 0.8
UBXN1-211ENST00000531056 UBXN6Q9BZV1 441 aa20.03■□□□□ 0.8
UBXN1-211ENST00000531056 INTS2Q9H0H0 1204 aaKnown RBP20.03■□□□□ 0.8
UBXN1-211ENST00000531056 LINC00597Q9H2U6 94 aa20.03■□□□□ 0.8
UBXN1-211ENST00000531056 PRMT8Q9NR22 394 aaPredicted RBP20.03■□□□□ 0.8
UBXN1-211ENST00000531056 OSER1Q9NX31 292 aa20.03■□□□□ 0.8
UBXN1-211ENST00000531056 TSPAN16Q9UKR8 245 aa20.03■□□□□ 0.8
UBXN1-211ENST00000531056 USP3Q9Y6I4 520 aa20.03■□□□□ 0.8
UBXN1-211ENST00000531056 TLR5O60602 858 aa20.02■□□□□ 0.8
UBXN1-211ENST00000531056 SP9P0CG40 484 aa20.02■□□□□ 0.8
UBXN1-211ENST00000531056 MRE11P49959 708 aa20.02■□□□□ 0.8
UBXN1-211ENST00000531056 CCINQ13939 588 aa20.02■□□□□ 0.8
UBXN1-211ENST00000531056 LRRC32Q14392 662 aa20.02■□□□□ 0.8
UBXN1-211ENST00000531056 GOLGA7BQ2TAP0 167 aa20.02■□□□□ 0.8
UBXN1-211ENST00000531056 RAB41Q5JT25 222 aa20.02■□□□□ 0.8
UBXN1-211ENST00000531056 TMEM270Q6UE05 265 aa20.02■□□□□ 0.8
UBXN1-211ENST00000531056 RBM43Q6ZSC3 357 aaKnown RBP20.02■□□□□ 0.8
UBXN1-211ENST00000531056 RRAGAQ7L523 313 aa20.02■□□□□ 0.8
UBXN1-211ENST00000531056 ALYREFQ86V81 257 aaKnown RBP20.02■□□□□ 0.8
UBXN1-211ENST00000531056 KREMEN1Q96MU8 473 aa20.02■□□□□ 0.8
UBXN1-211ENST00000531056 THAP9Q9H5L6 903 aa20.02■□□□□ 0.8
UBXN1-211ENST00000531056 NMUR1Q9HB89 426 aa20.02■□□□□ 0.8
UBXN1-211ENST00000531056 CYLDQ9NQC7 956 aa20.02■□□□□ 0.8
UBXN1-211ENST00000531056 RBM12Q9NTZ6 932 aaKnown RBP20.02■□□□□ 0.8
UBXN1-211ENST00000531056 CFAP97Q9P2B7 532 aa20.02■□□□□ 0.8
UBXN1-211ENST00000531056 FBXO4Q9UKT5 387 aa20.02■□□□□ 0.8
UBXN1-211ENST00000531056 KIAA1549LQ6ZVL6 1849 aa20.02■□□□□ 0.79
UBXN1-211ENST00000531056 MYO15AQ9UKN7 3530 aa20.01■□□□□ 0.79
UBXN1-211ENST00000531056 A0A1W2PQH9 124 aa20.01■□□□□ 0.79
UBXN1-211ENST00000531056 RNF225M0QZC1 329 aaPredicted RBP20.01■□□□□ 0.79
UBXN1-211ENST00000531056 O00370 1275 aa20.01■□□□□ 0.79
UBXN1-211ENST00000531056 TRDMT1O14717 391 aaKnown RBP20.01■□□□□ 0.79
UBXN1-211ENST00000531056 LAMTOR5O43504 91 aa20.01■□□□□ 0.79
UBXN1-211ENST00000531056 PAEPP09466 180 aa20.01■□□□□ 0.79
UBXN1-211ENST00000531056 VDRP11473 427 aa20.01■□□□□ 0.79
UBXN1-211ENST00000531056 ERCC5P28715 1186 aaPredicted RBP20.01■□□□□ 0.79
UBXN1-211ENST00000531056 GJA4P35212 333 aa20.01■□□□□ 0.79
UBXN1-211ENST00000531056 ZNF132P52740 706 aa20.01■□□□□ 0.79
UBXN1-211ENST00000531056 BCAT1P54687 386 aa20.01■□□□□ 0.79
UBXN1-211ENST00000531056 GAS6Q14393 721 aa20.01■□□□□ 0.79
UBXN1-211ENST00000531056 TMEM196Q5HYL7 178 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms