RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 SCARA5Q6ZMJ2 495 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 RASSF3Q86WH2 238 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 ADGRG2Q8IZP9 1017 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 TPSD1Q9BZJ3 242 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 POLMQ9NP87 494 aaPredicted RBP16.59■□□□□ 0.25
CTSB-215ENST00000528965 ANGPTL2Q9UKU9 493 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 SH3BP1Q9Y3L3 701 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 NME7Q9Y5B8 376 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 ATG2BQ96BY7 2078 aa16.58■□□□□ 0.25
CTSB-215ENST00000528965 CNOT1A5YKK6 2376 aaKnown RBP16.58■□□□□ 0.25
CTSB-215ENST00000528965 KAT7O95251 611 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 CASP1P29466 404 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 GRIA2P42262 883 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 SLC5A3P53794 718 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 GAD2Q05329 585 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 CUL4BQ13620 913 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 CRY1Q16526 586 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 GAB4Q2WGN9 574 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 FOXD4L6Q3SYB3 417 aaPredicted RBP16.58■□□□□ 0.24
CTSB-215ENST00000528965 FOXD4L3Q6VB84 417 aaPredicted RBP16.58■□□□□ 0.24
CTSB-215ENST00000528965 NUDT18Q6ZVK8 323 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 CYP2U1Q7Z449 544 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 TTC30AQ86WT1 665 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 CCDC33Q8N5R6 958 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 PARD3BQ8TEW8 1205 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 WHAMMQ8TF30 809 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 ZNF516Q92618 1163 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 CHAMP1Q96JM3 812 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 GZF1Q9H116 711 aaPredicted RBP16.58■□□□□ 0.24
CTSB-215ENST00000528965 SMOC1Q9H4F8 434 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 ARHGEF4Q9NR80 690 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 KRT82Q9NSB4 513 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 PCDHA7Q9UN72 937 aa16.58■□□□□ 0.24
CTSB-215ENST00000528965 EML5Q05BV3 1969 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 MYO16Q9Y6X6 1858 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 LRRIQ3A6PVS8 624 aaPredicted RBP16.57■□□□□ 0.24
CTSB-215ENST00000528965 COCHO43405 550 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 KLF8O95600 359 aaPredicted RBP16.57■□□□□ 0.24
CTSB-215ENST00000528965 RPN1P04843 607 aaKnown RBP16.57■□□□□ 0.24
CTSB-215ENST00000528965 SLFN14P0C7P3 912 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 CASP4P49662 377 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 KDSRQ06136 332 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 BYSLQ13895 437 aaKnown RBP16.57■□□□□ 0.24
CTSB-215ENST00000528965 ST3GAL2Q16842 350 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 SNX30Q5VWJ9 437 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 DAB2IPQ5VWQ8 1189 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 TCEAL6Q6IPX3 200 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 TRMT11Q7Z4G4 463 aaKnown RBP16.57■□□□□ 0.24
CTSB-215ENST00000528965 SLC9A9Q8IVB4 645 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 ALLCQ8N6M5 410 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 TXNDC5Q8NBS9 432 aaKnown RBP16.57■□□□□ 0.24
CTSB-215ENST00000528965 MDGA1Q8NFP4 955 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 TAF4BQ92750 862 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 TCEAL3Q969E4 200 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 LSM14BQ9BX40 385 aaKnown RBP16.57■□□□□ 0.24
CTSB-215ENST00000528965 FBXO44Q9H4M3 255 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 RXFP3Q9NSD7 469 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 TMEM30AQ9NV96 361 aa16.57■□□□□ 0.24
CTSB-215ENST00000528965 BCCIPQ9P287 314 aaKnown RBP eCLIP16.57■□□□□ 0.24
CTSB-215ENST00000528965 SCAMP3O14828 347 aaKnown RBP16.56■□□□□ 0.24
CTSB-215ENST00000528965 TM4SF5O14894 197 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 KHNYNO15037 678 aaKnown RBP16.56■□□□□ 0.24
CTSB-215ENST00000528965 AP1G2O75843 785 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 KIF20AO95235 890 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 MYL1P05976 194 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 DPP6P42658 865 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 TNFRSF4P43489 277 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 CLDN10P78369 228 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 GOLGA8FQ08AF8 430 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 GOLGA8DPQ0D2H9 430 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 SGSM1Q2NKQ1 1148 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 LY6G5CQ5SRR4 150 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 RHBDF2Q6PJF5 856 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 TMEM174Q8WUU8 243 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 KCNK16Q96T55 309 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 DUSP9Q99956 384 aaKnown RBP16.56■□□□□ 0.24
CTSB-215ENST00000528965 IMPG2Q9BZV3 1241 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 DNAI2Q9GZS0 605 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 USP25Q9UHP3 1055 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 CIZ1Q9ULV3 898 aaPredicted RBP16.56■□□□□ 0.24
CTSB-215ENST00000528965 FRMD4BQ9Y2L6 1034 aa16.56■□□□□ 0.24
CTSB-215ENST00000528965 PDXKO00764 312 aa16.55■□□□□ 0.24
CTSB-215ENST00000528965 HOXC11O43248 304 aaPredicted RBP16.55■□□□□ 0.24
CTSB-215ENST00000528965 TIE1P35590 1138 aa16.55■□□□□ 0.24
CTSB-215ENST00000528965 SLC6A11P48066 632 aa16.55■□□□□ 0.24
CTSB-215ENST00000528965 DHPSP49366 369 aaPredicted RBP16.55■□□□□ 0.24
CTSB-215ENST00000528965 CDH8P55286 799 aa16.55■□□□□ 0.24
CTSB-215ENST00000528965 ZACNQ401N2 412 aa16.55■□□□□ 0.24
CTSB-215ENST00000528965 LPCAT2Q7L5N7 544 aa16.55■□□□□ 0.24
CTSB-215ENST00000528965 ACOT1Q86TX2 421 aa16.55■□□□□ 0.24
CTSB-215ENST00000528965 UNC93AQ86WB7 457 aa16.55■□□□□ 0.24
CTSB-215ENST00000528965 C12orf40Q86WS4 652 aa16.55■□□□□ 0.24
CTSB-215ENST00000528965 GRAMD1CQ8IYS0 662 aa16.55■□□□□ 0.24
CTSB-215ENST00000528965 IL17RCQ8NAC3 791 aa16.55■□□□□ 0.24
CTSB-215ENST00000528965 SPRYD3Q8NCJ5 442 aa16.55■□□□□ 0.24
CTSB-215ENST00000528965 SCAMP5Q8TAC9 235 aa16.55■□□□□ 0.24
CTSB-215ENST00000528965 PLEKHO2Q8TD55 490 aa16.55■□□□□ 0.24
CTSB-215ENST00000528965 TMC2Q8TDI7 906 aa16.55■□□□□ 0.24
CTSB-215ENST00000528965 KCNV2Q8TDN2 545 aa16.55■□□□□ 0.24
CTSB-215ENST00000528965 CCDC47Q96A33 483 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms