RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 ACADSP16219 412 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 ZNF135P52742 658 aaPredicted RBP8.78□□□□□ -1
CTNND1-219ENST00000528621 MAP3K7CLP57077 242 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 PLOD1Q02809 727 aaPredicted RBP8.78□□□□□ -1
CTNND1-219ENST00000528621 TMEM132BQ14DG7 1078 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 GLRA4Q5JXX5 417 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 TTI2Q6NXR4 508 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 ACOT1Q86TX2 421 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 TRIM48Q8IWZ4 208 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 ARHGEF28Q8N1W1 1705 aaKnown RBP8.78□□□□□ -1
CTNND1-219ENST00000528621 FAM172AQ8WUF8 416 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 UCMAQ8WVF2 138 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 CAVIN3Q969G5 261 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 ZFP42Q96MM3 310 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 SEMA6BQ9H3T3 888 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 PDGFCQ9NRA1 345 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 DPP7Q9UHL4 492 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 ANKRD6Q9Y2G4 727 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 TMEM131LA2VDJ0 1609 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 SNTNA6NMZ2 147 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 B2RBV5 119 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 ZBTB22O15209 634 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 RBP1P09455 135 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 RARGP13631 454 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 ITIH5Q86UX2 942 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 PHF21AQ96BD5 680 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 VCPIP1Q96JH7 1222 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 KLF6Q99612 283 aaPredicted RBP8.78□□□□□ -1
CTNND1-219ENST00000528621 IL1RL2Q9HB29 575 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 IARS2Q9NSE4 1012 aaKnown RBP8.78□□□□□ -1
CTNND1-219ENST00000528621 COL3A1P02461 1466 aaPredicted RBP8.78□□□□□ -1
CTNND1-219ENST00000528621 EIF4E1BA6NMX2 242 aaKnown RBP8.78□□□□□ -1
CTNND1-219ENST00000528621 TRIM49D1C9J1S8 452 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 GSNP06396 782 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 CHI3L1P36222 383 aaPredicted RBP8.78□□□□□ -1
CTNND1-219ENST00000528621 VHLP40337 213 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 KLC1Q07866 573 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 ELAVL2Q12926 359 aaKnown RBP8.78□□□□□ -1
CTNND1-219ENST00000528621 MKRN4PQ13434 485 aaPredicted RBP8.78□□□□□ -1
CTNND1-219ENST00000528621 PGM5Q15124 567 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 METTL7BQ6UX53 244 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 BLOC1S5Q8TDH9 187 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 SPIRE2Q8WWL2 714 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 GLT1D1Q96MS3 346 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 GPRC5CQ9NQ84 441 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 CHORDC1Q9UHD1 332 aaPredicted RBP8.78□□□□□ -1
CTNND1-219ENST00000528621 SFMBT1Q9UHJ3 866 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 ZNF229Q9UJW7 825 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 SPACA6W5XKT8 324 aa8.78□□□□□ -1
CTNND1-219ENST00000528621 TCRBV5S4A2TA0A5A2 114 aa8.77□□□□□ -1
CTNND1-219ENST00000528621 F8VZ95 297 aa8.77□□□□□ -1
CTNND1-219ENST00000528621 WDR47O94967 919 aa8.77□□□□□ -1
CTNND1-219ENST00000528621 PLEKP08567 350 aaPredicted RBP8.77□□□□□ -1
CTNND1-219ENST00000528621 PSMA4P25789 261 aaKnown RBP8.77□□□□□ -1
CTNND1-219ENST00000528621 PTPN7P35236 360 aa8.77□□□□□ -1
CTNND1-219ENST00000528621 SLC29A2Q14542 456 aa8.77□□□□□ -1
CTNND1-219ENST00000528621 TMEM119Q4V9L6 283 aa8.77□□□□□ -1
CTNND1-219ENST00000528621 CBWD2Q8IUF1 395 aa8.77□□□□□ -1
CTNND1-219ENST00000528621 CENPLQ8N0S6 344 aaPredicted RBP8.77□□□□□ -1
CTNND1-219ENST00000528621 MYO1HQ8N1T3 1032 aa8.77□□□□□ -1
CTNND1-219ENST00000528621 DNAJC9Q8WXX5 260 aa8.77□□□□□ -1
CTNND1-219ENST00000528621 IL17RAQ96F46 866 aa8.77□□□□□ -1
CTNND1-219ENST00000528621 STN1Q9H668 368 aaKnown RBP8.77□□□□□ -1
CTNND1-219ENST00000528621 DTNAQ9Y4J8 743 aa8.77□□□□□ -1
CTNND1-219ENST00000528621 TAF6LQ9Y6J9 622 aa8.77□□□□□ -1
CTNND1-219ENST00000528621 MEGF6O75095 1541 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 TCN1P20061 433 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-219ENST00000528621 PSMA3P25788 255 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 HERVK_113P62684 666 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 CDKAL1Q5VV42 579 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 DDX42Q86XP3 938 aaKnown RBP eCLIP8.77□□□□□ -1.01
CTNND1-219ENST00000528621 DDI1Q8WTU0 396 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 RPRD1AQ96P16 312 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-219ENST00000528621 SYTL2Q9HCH5 934 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 PHTF1Q9UMS5 762 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 ATP11BQ9Y2G3 1177 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 TNS2Q63HR2 1409 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 A0A1B0GW55 424 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 HACD1B0YJ81 288 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 FOXN3O00409 490 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-219ENST00000528621 DUX4L2P0CJ85 424 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 DUX4L3P0CJ86 424 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 DUX4L4P0CJ87 422 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 DUX4L5P0CJ88 424 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 DUX4L6P0CJ89 424 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 DUX4L7P0CJ90 424 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 KCNA3P22001 575 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 DSG3P32926 999 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 KCNJ1P48048 391 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 BTKQ06187 659 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 CTXN3Q4LDR2 81 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 GRTP1Q5TC63 336 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 C11orf96Q7Z7L8 435 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 ZNF410Q86VK4 478 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 ARRDC4Q8NCT1 418 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 SEPT8Q92599 483 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 ZNF333Q96JL9 665 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 FICDQ9BVA6 458 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 ADGRE3Q9BY15 652 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 L2HGDHQ9H9P8 463 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms