RNA–Protein interactions for RNA: ENST00000528494.5

ATG13-211, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 2,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-211ENST00000528494 KRIT1O00522 736 aa13.39□□□□□ -0.27
ATG13-211ENST00000528494 PROSCO94903 275 aa13.39□□□□□ -0.27
ATG13-211ENST00000528494 KRT3P12035 628 aa13.39□□□□□ -0.27
ATG13-211ENST00000528494 TCF4P15884 667 aa13.39□□□□□ -0.27
ATG13-211ENST00000528494 RFC1P35251 1148 aaPredicted RBP13.39□□□□□ -0.27
ATG13-211ENST00000528494 RANBP1P43487 201 aa13.39□□□□□ -0.27
ATG13-211ENST00000528494 CTCFP49711 727 aaPredicted RBP13.39□□□□□ -0.27
ATG13-211ENST00000528494 OGDHQ02218 1023 aa13.39□□□□□ -0.27
ATG13-211ENST00000528494 BFSP2Q13515 415 aa13.39□□□□□ -0.27
ATG13-211ENST00000528494 HHATQ5VTY9 493 aa13.39□□□□□ -0.27
ATG13-211ENST00000528494 ARHGAP22Q7Z5H3 698 aa13.39□□□□□ -0.27
ATG13-211ENST00000528494 ZNF598Q86UK7 904 aaKnown RBP13.39□□□□□ -0.27
ATG13-211ENST00000528494 GALNT15Q8N3T1 639 aa13.39□□□□□ -0.27
ATG13-211ENST00000528494 JOSD2Q8TAC2 188 aa13.39□□□□□ -0.27
ATG13-211ENST00000528494 FAM81AQ8TBF8 368 aa13.39□□□□□ -0.27
ATG13-211ENST00000528494 SLC2A14Q8TDB8 520 aa13.39□□□□□ -0.27
ATG13-211ENST00000528494 ACTRT1Q8TDG2 376 aa13.39□□□□□ -0.27
ATG13-211ENST00000528494 DIS3LQ8TF46 1054 aaKnown RBP13.39□□□□□ -0.27
ATG13-211ENST00000528494 ZFAND2BQ8WV99 257 aa13.39□□□□□ -0.27
ATG13-211ENST00000528494 HESX1Q9UBX0 185 aa13.39□□□□□ -0.27
ATG13-211ENST00000528494 NR2E1Q9Y466 385 aa13.39□□□□□ -0.27
ATG13-211ENST00000528494 TCRBV5S1A1TA0A578 114 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 GRAP2O75791 330 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 ITGB1P05556 798 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 IMPDH2P12268 514 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 CTNNA1P35221 906 aaKnown RBP13.38□□□□□ -0.27
ATG13-211ENST00000528494 BRCC3P46736 316 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 TIGD5Q53EQ6 642 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 C8orf74Q6P047 294 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 CPLX4Q7Z7G2 160 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 XYLT1Q86Y38 959 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 ZNF280BQ86YH2 543 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 PIWIL1Q96J94 861 aaKnown RBP13.38□□□□□ -0.27
ATG13-211ENST00000528494 CARD9Q9H257 536 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 METTL5Q9NRN9 209 aaKnown RBP13.38□□□□□ -0.27
ATG13-211ENST00000528494 DDX43Q9NXZ2 648 aaKnown RBP13.38□□□□□ -0.27
ATG13-211ENST00000528494 STRIP2Q9ULQ0 834 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 PCDHA3Q9Y5H8 950 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 CFAP73A6NFT4 308 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 CCT8L1PA6NM43 557 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 CLDN5O00501 218 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 CES2O00748 559 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 GSTA1P08263 222 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 SKIP12755 728 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 TAS2R40P59535 323 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 ZNF252P-AS1Q0IIN9 211 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 ZNF268Q14587 947 aaPredicted RBP13.38□□□□□ -0.27
ATG13-211ENST00000528494 CLLU1OSQ5K130 101 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 ZFYVE27Q5T4F4 411 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 OR6B2Q6IFH4 312 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 GLB1LQ6UWU2 654 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 MAATS1Q7Z4T9 603 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 SCUBE3Q8IX30 993 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 TOP6BLQ8N6T0 577 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 TEX9Q8N6V9 391 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 B3GALNT2Q8NCR0 500 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.38□□□□□ -0.27
ATG13-211ENST00000528494 B3GNT5Q9BYG0 378 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 MIS12Q9H081 205 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 SUDS3Q9H7L9 328 aaPredicted RBP13.38□□□□□ -0.27
ATG13-211ENST00000528494 TMBIM4Q9HC24 238 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 KLHL11Q9NVR0 708 aa13.38□□□□□ -0.27
ATG13-211ENST00000528494 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.38□□□□□ -0.27
ATG13-211ENST00000528494 B4GALT3O60512 393 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 RNF8O76064 485 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 FAM153BP0C7A2 387 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 CCND1P24385 295 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 FAM153CQ494X1 144 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 TRIM60Q495X7 471 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 ATP13A4Q4VNC1 1196 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 CCDC38Q502W7 563 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 FAM102AQ5T9C2 384 aaPredicted RBP13.37□□□□□ -0.27
ATG13-211ENST00000528494 KIAA0319Q5VV43 1072 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 SLC39A5Q6ZMH5 540 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 DEFB128Q7Z7B8 93 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 CRYBG2Q8N1P7 616 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 RASGEF1CQ8N431 466 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 OSBPL1AQ9BXW6 950 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 DDX47Q9H0S4 455 aaKnown RBP13.37□□□□□ -0.27
ATG13-211ENST00000528494 FAM124BQ9H5Z6 455 aaPredicted RBP13.37□□□□□ -0.27
ATG13-211ENST00000528494 UBN1Q9NPG3 1134 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 IP6K2Q9UHH9 426 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 FAM153AQ9UHL3 310 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 SLC12A6Q9UHW9 1150 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 NFU1Q9UMS0 254 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 FAM163BP0C2L3 166 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 PYGBP11216 843 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 TKTP29401 623 aaKnown RBP13.37□□□□□ -0.27
ATG13-211ENST00000528494 RPL9P32969 192 aaKnown RBP13.37□□□□□ -0.27
ATG13-211ENST00000528494 CYP2C18P33260 490 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 MNX1P50219 401 aaPredicted RBP13.37□□□□□ -0.27
ATG13-211ENST00000528494 RABGGTBP53611 331 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 TLE2Q04725 743 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 RNASELQ05823 741 aaKnown RBP13.37□□□□□ -0.27
ATG13-211ENST00000528494 TUSC3Q13454 348 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 TAF5Q15542 800 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 TCTN1Q2MV58 587 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 PPP1R15BQ5SWA1 713 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 LIMS2Q7Z4I7 341 aa13.37□□□□□ -0.27
ATG13-211ENST00000528494 TBC1D1Q86TI0 1168 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms