RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 PCDHGC3Q9UN70 934 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 MAGED2Q9UNF1 606 aaPredicted RBP7.78□□□□□ -1.16
C11orf54-207ENST00000528288 HES2Q9Y543 173 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 MGAMO43451 1857 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 LCTP09848 1927 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 TRIM49D1C9J1S8 452 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 ACKR2O00590 384 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 INHBAP08476 426 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 RPS12P25398 132 aaKnown RBP7.78□□□□□ -1.16
C11orf54-207ENST00000528288 PHBP35232 272 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 MBTD1Q05BQ5 628 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 TTLL12Q14166 644 aaPredicted RBP7.78□□□□□ -1.16
C11orf54-207ENST00000528288 ZCCHC23Q6ZST2 131 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 MPP5Q8N3R9 675 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 ACAP3Q96P50 834 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 NUDCD1Q96RS6 583 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 MIPEPQ99797 713 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 APOL6Q9BWW8 343 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 ACSS3Q9H6R3 686 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 EBF2Q9HAK2 575 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 STRIP2Q9ULQ0 834 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 MCM3APO60318 1980 aa7.77□□□□□ -1.16
C11orf54-207ENST00000528288 BRCA2P51587 3418 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 SOCS7O14512 581 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 INSRRP14616 1297 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 YARSP54577 528 aaKnown RBP7.77□□□□□ -1.17
C11orf54-207ENST00000528288 RIPK1Q13546 671 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 NBPF20Q3BBV1 942 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 TRMT10BQ6PF06 316 aaKnown RBP7.77□□□□□ -1.17
C11orf54-207ENST00000528288 ADGRD1Q6QNK2 874 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 ALYREFQ86V81 257 aaKnown RBP7.77□□□□□ -1.17
C11orf54-207ENST00000528288 TDRPQ86YL5 185 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 BANPQ8N9N5 519 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 DTX3LQ8TDB6 740 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 MZB1Q8WU39 189 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 GRAMD1AQ96CP6 724 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 RSRC1Q96IZ7 334 aaKnown RBP7.77□□□□□ -1.17
C11orf54-207ENST00000528288 PTPRHQ9HD43 1115 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 KCNG1Q9UIX4 513 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 TSPAN16Q9UKR8 245 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 MYO18AQ92614 2054 aaKnown RBP7.77□□□□□ -1.17
C11orf54-207ENST00000528288 PRPSAP2O60256 369 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 PDHA1P08559 390 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 ATP2A2P16615 1042 aaKnown RBP7.77□□□□□ -1.17
C11orf54-207ENST00000528288 GPD2P43304 727 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 RABGGTBP53611 331 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 ZNF200P98182 395 aaPredicted RBP7.77□□□□□ -1.17
C11orf54-207ENST00000528288 MXD4Q14582 209 aaPredicted RBP7.77□□□□□ -1.17
C11orf54-207ENST00000528288 ANKRD20A2Q5SQ80 823 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 CELF3Q5SZQ8 465 aaKnown RBP7.77□□□□□ -1.17
C11orf54-207ENST00000528288 ANKRD20A1Q5TYW2 823 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 ANKRD20A3Q5VUR7 823 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 PMF1Q6P1K2 205 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 ZNF276Q8N554 614 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 NIPA2Q8N8Q9 360 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 ARMC2Q8NEN0 867 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.77□□□□□ -1.17
C11orf54-207ENST00000528288 MAGEC3Q8TD91 643 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 TSSK1BQ9BXA7 367 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 ZNF518BQ9C0D4 1074 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 DENND2DQ9H6A0 471 aaPredicted RBP7.77□□□□□ -1.17
C11orf54-207ENST00000528288 SMYD2Q9NRG4 433 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 TMPRSS4Q9NRS4 437 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 RGS17Q9UGC6 210 aaPredicted RBP7.77□□□□□ -1.17
C11orf54-207ENST00000528288 SLC24A2Q9UI40 661 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 SSC5DA1L4H1 1573 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 PARP14Q460N5 1801 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 APOC4-APOC2K7ER74 178 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 MAGEB2O15479 319 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 CILPO75339 1184 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 APOC2P02655 101 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 PDGFRBP09619 1106 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 CCND1P24385 295 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 CDH5P33151 784 aaPredicted RBP7.77□□□□□ -1.17
C11orf54-207ENST00000528288 ACVR2BQ13705 512 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 TAF11Q15544 211 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 GOLGA7BQ2TAP0 167 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 SLC10A6Q3KNW5 377 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 MROH9Q5TGP6 573 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 FYB2Q5VWT5 728 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 CDCA2Q69YH5 1023 aaPredicted RBP7.77□□□□□ -1.17
C11orf54-207ENST00000528288 DSTYKQ6XUX3 929 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 TSHZ1Q6ZSZ6 1077 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 CYP4V2Q6ZWL3 525 aaPredicted RBP7.77□□□□□ -1.17
C11orf54-207ENST00000528288 APBB1IPQ7Z5R6 666 aaPredicted RBP7.77□□□□□ -1.17
C11orf54-207ENST00000528288 CLNKQ7Z7G1 428 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 NLGN2Q8NFZ4 835 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 FBXO27Q8NI29 283 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 FGD4Q96M96 766 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 PLCD4Q9BRC7 762 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 TMEM120AQ9BXJ8 343 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 FOXP3Q9BZS1 431 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 IFT122Q9HBG6 1241 aa7.77□□□□□ -1.17
C11orf54-207ENST00000528288 MED7O43513 233 aa7.76□□□□□ -1.17
C11orf54-207ENST00000528288 PEX11AO75192 247 aa7.76□□□□□ -1.17
C11orf54-207ENST00000528288 DDNO94850 711 aaPredicted RBP7.76□□□□□ -1.17
C11orf54-207ENST00000528288 MYL2P10916 166 aa7.76□□□□□ -1.17
C11orf54-207ENST00000528288 ALADP13716 330 aa7.76□□□□□ -1.17
C11orf54-207ENST00000528288 GPD1P21695 349 aa7.76□□□□□ -1.17
C11orf54-207ENST00000528288 TAP1Q03518 808 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms