RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 WDR5BQ86VZ2 330 aa24.5■■□□□ 1.51
PKP3-206ENST00000528036 FBXL13Q8NEE6 735 aa24.5■■□□□ 1.51
PKP3-206ENST00000528036 ACDQ96AP0 544 aa24.5■■□□□ 1.51
PKP3-206ENST00000528036 RNF38Q9H0F5 515 aa24.5■■□□□ 1.51
PKP3-206ENST00000528036 TLR8Q9NR97 1041 aaKnown RBP24.5■■□□□ 1.51
PKP3-206ENST00000528036 ZNF638Q14966 1978 aaKnown RBP24.5■■□□□ 1.51
PKP3-206ENST00000528036 OBSL1O75147 1896 aa24.49■■□□□ 1.51
PKP3-206ENST00000528036 PTPRDP23468 1912 aa24.49■■□□□ 1.51
PKP3-206ENST00000528036 LRP3O75074 770 aa24.49■■□□□ 1.51
PKP3-206ENST00000528036 ZDHHC11BP0C7U3 371 aa24.49■■□□□ 1.51
PKP3-206ENST00000528036 PRCPP42785 496 aa24.49■■□□□ 1.51
PKP3-206ENST00000528036 ID4P47928 161 aa24.49■■□□□ 1.51
PKP3-206ENST00000528036 IFRD2Q12894 506 aaPredicted RBP24.49■■□□□ 1.51
PKP3-206ENST00000528036 PREPLQ4J6C6 727 aaPredicted RBP24.49■■□□□ 1.51
PKP3-206ENST00000528036 SPOPLQ6IQ16 392 aa24.49■■□□□ 1.51
PKP3-206ENST00000528036 CYFIP2Q96F07 1278 aa24.49■■□□□ 1.51
PKP3-206ENST00000528036 RAB20Q9NX57 234 aa24.49■■□□□ 1.51
PKP3-206ENST00000528036 DMDP11532 3685 aa24.49■■□□□ 1.51
PKP3-206ENST00000528036 CILPO75339 1184 aa24.48■■□□□ 1.51
PKP3-206ENST00000528036 ADH1CP00326 375 aa24.48■■□□□ 1.51
PKP3-206ENST00000528036 EIF2DP41214 584 aaKnown RBP24.48■■□□□ 1.51
PKP3-206ENST00000528036 SIM2Q14190 667 aaPredicted RBP24.48■■□□□ 1.51
PKP3-206ENST00000528036 GREB1Q4ZG55 1949 aa24.48■■□□□ 1.51
PKP3-206ENST00000528036 ERMP1Q7Z2K6 904 aa24.48■■□□□ 1.51
PKP3-206ENST00000528036 ADGRG2Q8IZP9 1017 aa24.48■■□□□ 1.51
PKP3-206ENST00000528036 SCAMP5Q8TAC9 235 aa24.48■■□□□ 1.51
PKP3-206ENST00000528036 CHFRQ96EP1 664 aa24.48■■□□□ 1.51
PKP3-206ENST00000528036 SMOQ99835 787 aa24.48■■□□□ 1.51
PKP3-206ENST00000528036 NACA2Q9H009 215 aa24.48■■□□□ 1.51
PKP3-206ENST00000528036 LINC00597Q9H2U6 94 aa24.48■■□□□ 1.51
PKP3-206ENST00000528036 APOBEC3GQ9HC16 384 aaKnown RBP24.48■■□□□ 1.51
PKP3-206ENST00000528036 CHORDC1Q9UHD1 332 aaPredicted RBP24.48■■□□□ 1.51
PKP3-206ENST00000528036 PCDHA5Q9Y5H7 936 aa24.48■■□□□ 1.51
PKP3-206ENST00000528036 PSMA7O14818 248 aa24.47■■□□□ 1.51
PKP3-206ENST00000528036 FOXD2O60548 495 aaPredicted RBP24.47■■□□□ 1.51
PKP3-206ENST00000528036 RNF40O75150 1001 aa24.47■■□□□ 1.51
PKP3-206ENST00000528036 EGFP01133 1207 aa24.47■■□□□ 1.51
PKP3-206ENST00000528036 CCDC130P13994 396 aa24.47■■□□□ 1.51
PKP3-206ENST00000528036 FNTBP49356 437 aa24.47■■□□□ 1.51
PKP3-206ENST00000528036 MAP3K7CLP57077 242 aa24.47■■□□□ 1.51
PKP3-206ENST00000528036 GOLGA8FQ08AF8 430 aa24.47■■□□□ 1.51
PKP3-206ENST00000528036 GOLGA8DPQ0D2H9 430 aa24.47■■□□□ 1.51
PKP3-206ENST00000528036 FILIP1Q7Z7B0 1213 aa24.47■■□□□ 1.51
PKP3-206ENST00000528036 TADA2BQ86TJ2 420 aa24.47■■□□□ 1.51
PKP3-206ENST00000528036 ZC3H3Q8IXZ2 948 aaKnown RBP24.47■■□□□ 1.51
PKP3-206ENST00000528036 SMYD4Q8IYR2 804 aaPredicted RBP24.47■■□□□ 1.51
PKP3-206ENST00000528036 KIAA2013Q8IYS2 634 aa24.47■■□□□ 1.51
PKP3-206ENST00000528036 DHTKD1Q96HY7 919 aaPredicted RBP24.47■■□□□ 1.51
PKP3-206ENST00000528036 MMRN2Q9H8L6 949 aa24.47■■□□□ 1.51
PKP3-206ENST00000528036 METTL14Q9HCE5 456 aaKnown RBP24.47■■□□□ 1.51
PKP3-206ENST00000528036 CFAP97Q9P2B7 532 aa24.47■■□□□ 1.51
PKP3-206ENST00000528036 SCML2Q9UQR0 700 aa24.47■■□□□ 1.51
PKP3-206ENST00000528036 PRR5-ARHGAP8B1AHC4 643 aa24.46■■□□□ 1.51
PKP3-206ENST00000528036 COCHO43405 550 aa24.46■■□□□ 1.51
PKP3-206ENST00000528036 RETP07949 1114 aa24.46■■□□□ 1.51
PKP3-206ENST00000528036 PSEN1P49768 467 aa24.46■■□□□ 1.51
PKP3-206ENST00000528036 ARHGAP8P85298 464 aa24.46■■□□□ 1.51
PKP3-206ENST00000528036 ZXDBP98169 803 aa24.46■■□□□ 1.51
PKP3-206ENST00000528036 SYT13Q7L8C5 426 aa24.46■■□□□ 1.51
PKP3-206ENST00000528036 C12orf29Q8N999 325 aa24.46■■□□□ 1.51
PKP3-206ENST00000528036 ZMIZ2Q8NF64 920 aa24.46■■□□□ 1.51
PKP3-206ENST00000528036 FAM49BQ9NUQ9 324 aa24.46■■□□□ 1.51
PKP3-206ENST00000528036 SMPD4Q9NXE4 827 aa24.46■■□□□ 1.51
PKP3-206ENST00000528036 SH3BP1Q9Y3L3 701 aa24.46■■□□□ 1.51
PKP3-206ENST00000528036 CFAP54Q96N23 3096 aa24.46■■□□□ 1.51
PKP3-206ENST00000528036 ANAPC1Q9H1A4 1944 aa24.45■■□□□ 1.51
PKP3-206ENST00000528036 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.45■■□□□ 1.5
PKP3-206ENST00000528036 SLC8A3P57103 927 aa24.45■■□□□ 1.5
PKP3-206ENST00000528036 YWHAEP62258 255 aaKnown RBP24.45■■□□□ 1.5
PKP3-206ENST00000528036 LMNB2Q03252 620 aa24.45■■□□□ 1.5
PKP3-206ENST00000528036 DHCR24Q15392 516 aa24.45■■□□□ 1.5
PKP3-206ENST00000528036 KLHDC10Q6PID8 442 aa24.45■■□□□ 1.5
PKP3-206ENST00000528036 FOXR2Q6PJQ5 311 aa24.45■■□□□ 1.5
PKP3-206ENST00000528036 CDK5RAP1Q96SZ6 601 aaKnown RBP24.45■■□□□ 1.5
PKP3-206ENST00000528036 UBXN6Q9BZV1 441 aa24.45■■□□□ 1.5
PKP3-206ENST00000528036 FBRSL1Q9HCM7 1045 aaKnown RBP24.45■■□□□ 1.5
PKP3-206ENST00000528036 GMIPQ9P107 970 aa24.45■■□□□ 1.5
PKP3-206ENST00000528036 HMGXB4Q9UGU5 601 aa24.45■■□□□ 1.5
PKP3-206ENST00000528036 ARMCX3Q9UH62 379 aaPredicted RBP24.45■■□□□ 1.5
PKP3-206ENST00000528036 CIZ1Q9ULV3 898 aaPredicted RBP24.45■■□□□ 1.5
PKP3-206ENST00000528036 COQ4Q9Y3A0 265 aa24.45■■□□□ 1.5
PKP3-206ENST00000528036 GPR179Q6PRD1 2367 aa24.45■■□□□ 1.5
PKP3-206ENST00000528036 ADORA2BP29275 332 aa24.44■■□□□ 1.5
PKP3-206ENST00000528036 PUM1Q14671 1186 aaKnown RBP eCLIP24.44■■□□□ 1.5
PKP3-206ENST00000528036 HSF5Q4G112 596 aaPredicted RBP24.44■■□□□ 1.5
PKP3-206ENST00000528036 TCERG1LQ5VWI1 586 aa24.44■■□□□ 1.5
PKP3-206ENST00000528036 ANKRD40Q6AI12 368 aa24.44■■□□□ 1.5
PKP3-206ENST00000528036 PRR23BQ6ZRT6 265 aa24.44■■□□□ 1.5
PKP3-206ENST00000528036 CLEC20AQ6ZU45 233 aa24.44■■□□□ 1.5
PKP3-206ENST00000528036 NUDT18Q6ZVK8 323 aa24.44■■□□□ 1.5
PKP3-206ENST00000528036 CEP68Q76N32 757 aa24.44■■□□□ 1.5
PKP3-206ENST00000528036 ZNF276Q8N554 614 aa24.44■■□□□ 1.5
PKP3-206ENST00000528036 DCLK2Q8N568 766 aa24.44■■□□□ 1.5
PKP3-206ENST00000528036 ELMO3Q96BJ8 720 aa24.44■■□□□ 1.5
PKP3-206ENST00000528036 CEP63Q96MT8 703 aa24.44■■□□□ 1.5
PKP3-206ENST00000528036 DUSP16Q9BY84 665 aa24.44■■□□□ 1.5
PKP3-206ENST00000528036 CYLDQ9NQC7 956 aa24.44■■□□□ 1.5
PKP3-206ENST00000528036 ZNF292O60281 2723 aa24.44■■□□□ 1.5
PKP3-206ENST00000528036 HRO43593 1189 aa24.43■■□□□ 1.5
PKP3-206ENST00000528036 TLR5O60602 858 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms