RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 PRR29P0C7W0 189 aa15.04■□□□□ -0
CAPN1-212ENST00000527887 RAP1GAPP47736 663 aa15.04■□□□□ -0
CAPN1-212ENST00000527887 NDST1P52848 882 aa15.04■□□□□ -0
CAPN1-212ENST00000527887 SLC5A3P53794 718 aa15.04■□□□□ -0
CAPN1-212ENST00000527887 INCA1Q0VD86 236 aa15.04■□□□□ -0
CAPN1-212ENST00000527887 HEATR6Q6AI08 1181 aaKnown RBP15.04■□□□□ -0
CAPN1-212ENST00000527887 SCARA5Q6ZMJ2 495 aa15.04■□□□□ -0
CAPN1-212ENST00000527887 DGLUCYQ7Z3D6 616 aa15.04■□□□□ -0
CAPN1-212ENST00000527887 ACOT1Q86TX2 421 aa15.04■□□□□ -0
CAPN1-212ENST00000527887 GAB3Q8WWW8 586 aa15.04■□□□□ -0
CAPN1-212ENST00000527887 SDCBP2Q9H190 292 aa15.04■□□□□ -0
CAPN1-212ENST00000527887 TMEM8AQ9HCN3 771 aa15.04■□□□□ -0
CAPN1-212ENST00000527887 PNPLA8Q9NP80 782 aa15.04■□□□□ -0
CAPN1-212ENST00000527887 C2orf42Q9NWW7 574 aa15.04■□□□□ -0
CAPN1-212ENST00000527887 USP18Q9UMW8 372 aa15.04■□□□□ -0
CAPN1-212ENST00000527887 KIF26AQ9ULI4 1882 aaPredicted RBP15.03■□□□□ -0
CAPN1-212ENST00000527887 CEP250Q9BV73 2442 aa15.03■□□□□ -0
CAPN1-212ENST00000527887 GOLGA6L4A6NEF3 574 aa15.03■□□□□ -0
CAPN1-212ENST00000527887 MBL2P11226 248 aaPredicted RBP15.03■□□□□ -0
CAPN1-212ENST00000527887 ASPAP45381 313 aa15.03■□□□□ -0
CAPN1-212ENST00000527887 RSPO4Q2I0M5 234 aaPredicted RBP15.03■□□□□ -0
CAPN1-212ENST00000527887 PREPLQ4J6C6 727 aaPredicted RBP15.03■□□□□ -0
CAPN1-212ENST00000527887 ZCWPW2Q504Y3 356 aa15.03■□□□□ -0
CAPN1-212ENST00000527887 COBLL1Q53SF7 1204 aa15.03■□□□□ -0
CAPN1-212ENST00000527887 KRT39Q6A163 491 aa15.03■□□□□ -0
CAPN1-212ENST00000527887 PKN3Q6P5Z2 889 aa15.03■□□□□ -0
CAPN1-212ENST00000527887 CACNA2D4Q7Z3S7 1137 aa15.03■□□□□ -0
CAPN1-212ENST00000527887 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.03■□□□□ -0
CAPN1-212ENST00000527887 FILIP1Q7Z7B0 1213 aa15.03■□□□□ -0
CAPN1-212ENST00000527887 SLC2A14Q8TDB8 520 aa15.03■□□□□ -0
CAPN1-212ENST00000527887 GSDMAQ96QA5 445 aa15.03■□□□□ -0
CAPN1-212ENST00000527887 HNRNPABQ99729 332 aaKnown RBP15.03■□□□□ -0
CAPN1-212ENST00000527887 NT5C1AQ9BXI3 368 aa15.03■□□□□ -0
CAPN1-212ENST00000527887 GOLPH3LQ9H4A5 285 aa15.03■□□□□ -0
CAPN1-212ENST00000527887 EBF1Q9UH73 591 aa15.03■□□□□ -0
CAPN1-212ENST00000527887 CHORDC1Q9UHD1 332 aaPredicted RBP15.03■□□□□ -0
CAPN1-212ENST00000527887 DENND4CQ5VZ89 1909 aa15.03■□□□□ -0
CAPN1-212ENST00000527887 DNAH14Q0VDD8 3507 aa15.02■□□□□ -0
CAPN1-212ENST00000527887 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.02■□□□□ -0
CAPN1-212ENST00000527887 CETN3O15182 167 aa15.02■□□□□ -0
CAPN1-212ENST00000527887 RPP40O75818 363 aaKnown RBP15.02■□□□□ -0
CAPN1-212ENST00000527887 APBB3O95704 486 aa15.02■□□□□ -0
CAPN1-212ENST00000527887 ADH1CP00326 375 aa15.02■□□□□ -0
CAPN1-212ENST00000527887 FAM200BP0CF97 657 aa15.02■□□□□ -0
CAPN1-212ENST00000527887 GCLMP48507 274 aa15.02■□□□□ -0
CAPN1-212ENST00000527887 MRPS21P82921 87 aaKnown RBP15.02■□□□□ -0
CAPN1-212ENST00000527887 IFRD2Q12894 506 aaPredicted RBP15.02■□□□□ -0
CAPN1-212ENST00000527887 DHCR24Q15392 516 aa15.02■□□□□ -0
CAPN1-212ENST00000527887 CSRP2Q16527 193 aa15.02■□□□□ -0
CAPN1-212ENST00000527887 HSF5Q4G112 596 aaPredicted RBP15.02■□□□□ -0
CAPN1-212ENST00000527887 RPLP0P6Q8NHW5 317 aa15.02■□□□□ -0
CAPN1-212ENST00000527887 SCAMP5Q8TAC9 235 aa15.02■□□□□ -0
CAPN1-212ENST00000527887 CHAMP1Q96JM3 812 aa15.02■□□□□ -0
CAPN1-212ENST00000527887 SMOQ99835 787 aa15.02■□□□□ -0
CAPN1-212ENST00000527887 NIF3L1Q9GZT8 377 aa15.02■□□□□ -0
CAPN1-212ENST00000527887 TLR8Q9NR97 1041 aaKnown RBP15.02■□□□□ -0
CAPN1-212ENST00000527887 KRT82Q9NSB4 513 aa15.02■□□□□ -0
CAPN1-212ENST00000527887 SMPD4Q9NXE4 827 aa15.02■□□□□ -0
CAPN1-212ENST00000527887 CFAP97Q9P2B7 532 aa15.02■□□□□ -0
CAPN1-212ENST00000527887 HOOK1Q9UJC3 728 aaKnown RBP15.02■□□□□ -0
CAPN1-212ENST00000527887 MAPK8IP1Q9UQF2 711 aa15.02■□□□□ -0
CAPN1-212ENST00000527887 A0A0A0MRY4 1105 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 AXIN1O15169 862 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 COCHO43405 550 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 SMC2O95347 1197 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 CYP17A1P05093 508 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 OPRD1P41143 372 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 PPP3CAQ08209 521 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 SPEM2Q0P670 501 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 DMC1Q14565 340 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 LPAL2Q16609 132 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 SKOR2Q2VWA4 1001 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-212ENST00000527887 SPOPLQ6IQ16 392 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 C11orf74Q86VG3 221 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 FMR1NBQ8N0W7 255 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-212ENST00000527887 FAM160A2Q8N612 972 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-212ENST00000527887 ZMIZ2Q8NF64 920 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 TAS1R2Q8TE23 839 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 CYFIP2Q96F07 1278 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 ZC3H10Q96K80 434 aaKnown RBP15.01□□□□□ -0.01
CAPN1-212ENST00000527887 PNKPQ96T60 521 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 RTKNQ9BST9 563 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 PARD6AQ9NPB6 346 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 SEMA4GQ9NTN9 838 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 CDV3Q9UKY7 258 aaKnown RBP15.01□□□□□ -0.01
CAPN1-212ENST00000527887 SCML2Q9UQR0 700 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 SH3BP1Q9Y3L3 701 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 PCDHGA5Q9Y5G8 931 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 PCDHA5Q9Y5H7 936 aa15.01□□□□□ -0.01
CAPN1-212ENST00000527887 K7EQS6 105 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 CILPO75339 1184 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 TRIM49P0CI25 452 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 TRIM49CP0CI26 452 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 CCDC192P0DO97 292 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 EPB41P11171 864 aaKnown RBP15□□□□□ -0.01
CAPN1-212ENST00000527887 CCDC130P13994 396 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 MAP3K7CLP57077 242 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 GAD2Q05329 585 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 GOLGA8FQ08AF8 430 aa15□□□□□ -0.01
CAPN1-212ENST00000527887 GOLGA8DPQ0D2H9 430 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms