RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 LGSNQ5TDP6 509 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 DCUN1D2Q6PH85 259 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 FASTKD5Q7L8L6 764 aaKnown RBP12.98□□□□□ -0.33
TSKU-203ENST00000527881 PCGF5Q86SE9 256 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 CLVS1Q8IUQ0 354 aaPredicted RBP12.98□□□□□ -0.33
TSKU-203ENST00000527881 COX4I2Q96KJ9 171 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 KCNK16Q96T55 309 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 MMP19Q99542 508 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 NYXQ9GZU5 481 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 RBM38Q9H0Z9 239 aaKnown RBP12.98□□□□□ -0.33
TSKU-203ENST00000527881 PCDH9Q9HC56 1237 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 ZBTB21Q9ULJ3 1066 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 KBTBD13C9JR72 458 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 CASQ2O14958 399 aaPredicted RBP12.97□□□□□ -0.33
TSKU-203ENST00000527881 CCNT2O60583 730 aaKnown RBP12.97□□□□□ -0.33
TSKU-203ENST00000527881 CPOXP36551 454 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 CRKLP46109 303 aaKnown RBP12.97□□□□□ -0.33
TSKU-203ENST00000527881 ESRRGP62508 458 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 PPP6R3Q5H9R7 873 aaPredicted RBP12.97□□□□□ -0.33
TSKU-203ENST00000527881 SLC15A3Q8IY34 581 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 NDUFAF2Q8N183 169 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 DDHD1Q8NEL9 900 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 VPS50Q96JG6 964 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 C7orf26Q96N11 449 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 OSBPL6Q9BZF3 934 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 C1orf21Q9H246 121 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 MRPL47Q9HD33 250 aaKnown RBP12.97□□□□□ -0.33
TSKU-203ENST00000527881 XPNPEP1Q9NQW7 623 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 KIF13BQ9NQT8 1826 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 A0A1B0GTW7 788 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 ITM2AO43736 263 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 CA8P35219 290 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 NUP107P57740 925 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 FLOT2Q14254 428 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 GPATCH4Q5T3I0 446 aaKnown RBP12.97□□□□□ -0.33
TSKU-203ENST00000527881 FAM91A1Q658Y4 838 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 POLNQ7Z5Q5 900 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 RCOR2Q8IZ40 523 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 PLEKHO2Q8TD55 490 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 TAS1R2Q8TE23 839 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 NLRP7Q8WX94 980 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 CMTM5Q96DZ9 223 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 PSMD13Q9UNM6 376 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 ATF5Q9Y2D1 282 aaPredicted RBP12.97□□□□□ -0.33
TSKU-203ENST00000527881 EFR3BQ9Y2G0 817 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 STK24Q9Y6E0 443 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 CEPT1Q9Y6K0 416 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 ARAP2Q8WZ64 1704 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 TCRBV9S1A1TA0A576 114 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 MATN2O00339 956 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 SPTLC1O15269 473 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 AP1G1O43747 822 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 GAS7O60861 476 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 DHRS4L1P0CG22 281 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 TCF4P15884 667 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 HSF5Q4G112 596 aaPredicted RBP12.97□□□□□ -0.33
TSKU-203ENST00000527881 KRT39Q6A163 491 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 DNAJC14Q6Y2X3 702 aaPredicted RBP12.97□□□□□ -0.33
TSKU-203ENST00000527881 CBWD2Q8IUF1 395 aa12.97□□□□□ -0.33
TSKU-203ENST00000527881 RBMX2Q9Y388 322 aaKnown RBP12.97□□□□□ -0.33
TSKU-203ENST00000527881 DENRO43583 198 aaKnown RBP12.96□□□□□ -0.33
TSKU-203ENST00000527881 DCXO43602 365 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 THRAP10827 490 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 PSMD6Q15008 389 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 Q6ZNX1 250 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 FBXW8Q8N3Y1 598 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 EME1Q96AY2 570 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 C1orf112Q9NSG2 853 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 RAB26Q9ULW5 256 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 IVNS1ABPQ9Y6Y0 642 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 SF3B1O75533 1304 aaKnown RBP eCLIP12.96□□□□□ -0.33
TSKU-203ENST00000527881 SNED1Q8TER0 1413 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 GIPC1O14908 333 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 BIRC5O15392 142 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 SNRPAP09012 282 aaKnown RBP12.96□□□□□ -0.33
TSKU-203ENST00000527881 GSTT2P0CG29 244 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 GSTT2BP0CG30 244 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 ITGA7Q13683 1181 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 ADRM1Q16186 407 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 C6orf183Q5T699 404 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 MROH9Q5TGP6 573 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 TTC39BQ5VTQ0 682 aaPredicted RBP12.96□□□□□ -0.33
TSKU-203ENST00000527881 DEPTORQ8TB45 409 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 AGR3Q8TD06 166 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 CPT1BQ92523 772 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 ACCSQ96QU6 501 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 DNAJC5Q9H3Z4 198 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 C6orf203Q9P0P8 240 aaPredicted RBP12.96□□□□□ -0.33
TSKU-203ENST00000527881 DCCP43146 1447 aa12.96□□□□□ -0.33
TSKU-203ENST00000527881 ALS2Q96Q42 1657 aa12.96□□□□□ -0.34
TSKU-203ENST00000527881 TCRBV7S3A2A0A539 114 aa12.96□□□□□ -0.34
TSKU-203ENST00000527881 SIN3BO75182 1162 aa12.96□□□□□ -0.34
TSKU-203ENST00000527881 AOC1P19801 751 aa12.96□□□□□ -0.34
TSKU-203ENST00000527881 TCN1P20061 433 aaPredicted RBP12.96□□□□□ -0.34
TSKU-203ENST00000527881 PRAMEP78395 509 aa12.96□□□□□ -0.34
TSKU-203ENST00000527881 OGFRL1Q5TC84 451 aaPredicted RBP12.96□□□□□ -0.34
TSKU-203ENST00000527881 CATSPER1Q8NEC5 780 aa12.96□□□□□ -0.34
TSKU-203ENST00000527881 SLITRK1Q96PX8 696 aa12.96□□□□□ -0.34
TSKU-203ENST00000527881 WRNIP1Q96S55 665 aa12.96□□□□□ -0.34
TSKU-203ENST00000527881 ARHGAP26Q9UNA1 814 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms