RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PADI3Q9ULW8 664 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 NHSQ6T4R5 1651 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 SF3B1O75533 1304 aaKnown RBP eCLIP15.66■□□□□ 0.19e-7■■■■■ 47.8
USP47-207ENST00000527733 UBA6A0AVT1 1052 aaPredicted RBP15.66■□□□□ 0.1
USP47-207ENST00000527733 H0Y626 953 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 CTCFP49711 727 aaPredicted RBP15.66■□□□□ 0.1
USP47-207ENST00000527733 MBTD1Q05BQ5 628 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 CRLF3Q8IUI8 442 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 B3GALNT2Q8NCR0 500 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 SMIM28A0A1B0GU29 152 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 E5RI56 91 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 GPR25O00155 361 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 RTN3O95197 1032 aaPredicted RBP15.66■□□□□ 0.1
USP47-207ENST00000527733 CALCAP01258 141 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 LTFP02788 710 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 GYS2P54840 703 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 TAS2R42Q7RTR8 314 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 EFHBQ8N7U6 833 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 ULBP1Q9BZM6 244 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 CCDC88AQ3V6T2 1871 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 CES2O00748 559 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 HSPA4LO95757 839 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 NPR3P17342 541 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 PCSK7Q16549 785 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 RASAL3Q86YV0 1011 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 WDR75Q8IWA0 830 aaKnown RBP15.65■□□□□ 0.1
USP47-207ENST00000527733 POPDC2Q9HBU9 364 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 MOXD2PA6NHM9 499 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 SIGLEC16A6NMB1 481 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 AGTP01019 485 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 GNRH1P01148 92 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 INHAP05111 366 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 POU5F1BQ06416 359 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 TUSC3Q13454 348 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 WDR93Q6P2C0 686 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 DCLRE1AQ6PJP8 1040 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 C3orf62Q6ZUJ4 267 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 ANKRD52Q8NB46 1076 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 HNRNPLLQ8WVV9 542 aaKnown RBP15.65■□□□□ 0.1
USP47-207ENST00000527733 ZNF558Q96NG5 402 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 SLC13A1Q9BZW2 595 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 HIPK3Q9H422 1215 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 OLA1Q9NTK5 396 aaKnown RBP15.65■□□□□ 0.1
USP47-207ENST00000527733 FIS1Q9Y3D6 152 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 MYH13Q9UKX3 1938 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 LGR5O75473 907 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 POLBP06746 335 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 PYGMP11217 842 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 ETFBP38117 255 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 MAP7Q14244 749 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 TTC31Q49AM3 519 aaPredicted RBP15.65■□□□□ 0.1
USP47-207ENST00000527733 C18orf25Q96B23 403 aaPredicted RBP15.65■□□□□ 0.1
USP47-207ENST00000527733 KCND1Q9NSA2 647 aa15.65■□□□□ 0.1
USP47-207ENST00000527733 STK25O00506 426 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 SELPP16109 830 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 MIPP30301 263 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 KREMEN1Q96MU8 473 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 SERPINB11Q96P15 392 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 FZD8Q9H461 694 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 SARS2Q9NP81 518 aaKnown RBP15.64■□□□□ 0.09
USP47-207ENST00000527733 DMGDHQ9UI17 866 aaKnown RBP15.64■□□□□ 0.09
USP47-207ENST00000527733 GJB6O95452 261 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 CHEK2O96017 543 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 C4BPAP04003 597 aaKnown RBP15.64■□□□□ 0.09
USP47-207ENST00000527733 CYP2F1P24903 491 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 ZNF200P98182 395 aaPredicted RBP15.64■□□□□ 0.09
USP47-207ENST00000527733 TWF1Q12792 350 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 MTM1Q13496 603 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 ZNF792Q3KQV3 632 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 MMEL1Q495T6 779 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 DDX53Q86TM3 631 aaKnown RBP15.64■□□□□ 0.09
USP47-207ENST00000527733 LINC00523Q86TU6 105 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 UNC45BQ8IWX7 931 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 NPLOC4Q8TAT6 608 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 CASKIN2Q8WXE0 1202 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 RAB3IPQ96QF0 476 aaPredicted RBP15.64■□□□□ 0.09
USP47-207ENST00000527733 MLXIPLQ9NP71 852 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 SRRDQ9UH36 339 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 STK38LQ9Y2H1 464 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 NOMO3P69849 1222 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 CCDC38Q502W7 563 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 ZBTB41Q5SVQ8 909 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 FAXCQ5TGI0 409 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 C9orf57Q5W0N0 161 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 SLC24A5Q71RS6 500 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 PHF13Q86YI8 300 aaPredicted RBP15.64■□□□□ 0.09
USP47-207ENST00000527733 TOP6BLQ8N6T0 577 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 WDR70Q9NW82 654 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 TMEM51Q9NW97 253 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 Q9Y3F1 56 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 F8VP50 259 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 NCAM2O15394 837 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 CYP1A2P05177 515 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 AVPR1AP37288 418 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 TBX4P57082 545 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 MAMLD1Q13495 774 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 TIGD7Q6NT04 549 aaPredicted RBP15.64■□□□□ 0.09
USP47-207ENST00000527733 MFSD7Q6UXD7 560 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 FRA10AC1Q70Z53 315 aa15.64■□□□□ 0.09
USP47-207ENST00000527733 PIGZQ86VD9 579 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms