RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 SMOC1Q9H4F8 434 aa23.75■■□□□ 1.39
TRAPPC4-208ENST00000527680 DMAC2Q9NW81 257 aa23.75■■□□□ 1.39
TRAPPC4-208ENST00000527680 FRMD4BQ9Y2L6 1034 aa23.75■■□□□ 1.39
TRAPPC4-208ENST00000527680 ACTN4O43707 911 aaKnown RBP23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 AP1G2O75843 785 aa23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 ADH1CP00326 375 aa23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 MPLP40238 635 aa23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 DLG4P78352 724 aa23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 CREB5Q02930 508 aa23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 RHBDF2Q6PJF5 856 aa23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 FAM35AQ86V20 835 aa23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 SLC9A9Q8IVB4 645 aa23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 OVCA2Q8WZ82 227 aa23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 SMARCD1Q96GM5 515 aa23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 CNTNAP3BQ96NU0 1288 aa23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 CNTNAP3Q9BZ76 1288 aa23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 TPSD1Q9BZJ3 242 aa23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 DMAP1Q9NPF5 467 aaPredicted RBP23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 VPS45Q9NRW7 570 aa23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 SH3BP1Q9Y3L3 701 aa23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 MYH10P35580 1976 aa23.74■■□□□ 1.39
TRAPPC4-208ENST00000527680 MYO16Q9Y6X6 1858 aa23.73■■□□□ 1.39
TRAPPC4-208ENST00000527680 PDXKO00764 312 aa23.73■■□□□ 1.39
TRAPPC4-208ENST00000527680 COCHO43405 550 aa23.73■■□□□ 1.39
TRAPPC4-208ENST00000527680 VNN1O95497 513 aa23.73■■□□□ 1.39
TRAPPC4-208ENST00000527680 NR3C1P04150 777 aa23.73■■□□□ 1.39
TRAPPC4-208ENST00000527680 RPN1P04843 607 aaKnown RBP23.73■■□□□ 1.39
TRAPPC4-208ENST00000527680 APODP05090 189 aa23.73■■□□□ 1.39
TRAPPC4-208ENST00000527680 ADRB1P08588 477 aa23.73■■□□□ 1.39
TRAPPC4-208ENST00000527680 CLDN10P78369 228 aa23.73■■□□□ 1.39
TRAPPC4-208ENST00000527680 MRPS21P82921 87 aaKnown RBP23.73■■□□□ 1.39
TRAPPC4-208ENST00000527680 ANO7Q6IWH7 933 aa23.73■■□□□ 1.39
TRAPPC4-208ENST00000527680 PAQR9Q6ZVX9 377 aa23.73■■□□□ 1.39
TRAPPC4-208ENST00000527680 CCDC47Q96A33 483 aaKnown RBP23.73■■□□□ 1.39
TRAPPC4-208ENST00000527680 SDCBP2Q9H190 292 aa23.73■■□□□ 1.39
TRAPPC4-208ENST00000527680 RXFP3Q9NSD7 469 aa23.73■■□□□ 1.39
TRAPPC4-208ENST00000527680 USP25Q9UHP3 1055 aa23.73■■□□□ 1.39
TRAPPC4-208ENST00000527680 CIZ1Q9ULV3 898 aaPredicted RBP23.73■■□□□ 1.39
TRAPPC4-208ENST00000527680 E2F8A0AVK6 867 aa23.72■■□□□ 1.39
TRAPPC4-208ENST00000527680 ANTXRLA6NF34 631 aa23.72■■□□□ 1.39
TRAPPC4-208ENST00000527680 CALUO43852 315 aaPredicted RBP23.72■■□□□ 1.39
TRAPPC4-208ENST00000527680 ADH5P11766 374 aa23.72■■□□□ 1.39
TRAPPC4-208ENST00000527680 PFKFB1P16118 471 aa23.72■■□□□ 1.39
TRAPPC4-208ENST00000527680 TRIM21P19474 475 aaKnown RBP23.72■■□□□ 1.39
TRAPPC4-208ENST00000527680 CMA1P23946 247 aa23.72■■□□□ 1.39
TRAPPC4-208ENST00000527680 TIE1P35590 1138 aa23.72■■□□□ 1.39
TRAPPC4-208ENST00000527680 SLC5A3P53794 718 aa23.72■■□□□ 1.39
TRAPPC4-208ENST00000527680 ORC1Q13415 861 aa23.72■■□□□ 1.39
TRAPPC4-208ENST00000527680 GAB4Q2WGN9 574 aa23.72■■□□□ 1.39
TRAPPC4-208ENST00000527680 PLA2G2CQ5R387 149 aa23.72■■□□□ 1.39
TRAPPC4-208ENST00000527680 SPATA32Q96LK8 384 aa23.72■■□□□ 1.39
TRAPPC4-208ENST00000527680 KCTD10Q9H3F6 313 aa23.72■■□□□ 1.39
TRAPPC4-208ENST00000527680 KRT82Q9NSB4 513 aa23.72■■□□□ 1.39
TRAPPC4-208ENST00000527680 MMP17Q9ULZ9 603 aa23.72■■□□□ 1.39
TRAPPC4-208ENST00000527680 ABCA7Q8IZY2 2146 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 ALDH1A2O94788 518 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 KAT7O95251 611 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 CCDC130P13994 396 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 NDST1P52848 882 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 LIMK1P53667 647 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 CRY1Q16526 586 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 ZACNQ401N2 412 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 LY6G5CQ5SRR4 150 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 STPG1Q5TH74 334 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 BTBD8Q5XKL5 378 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 SV2AQ7L0J3 742 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 FUKQ8N0W3 1084 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 TMC2Q8TDI7 906 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 CCSER2Q9H7U1 834 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.71■■□□□ 1.391e-22■■■■■ 419.2
TRAPPC4-208ENST00000527680 ARHGEF4Q9NR80 690 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 COMMD8Q9NX08 183 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 GMIPQ9P107 970 aa23.71■■□□□ 1.39
TRAPPC4-208ENST00000527680 TNFRSF10BO14763 440 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 IKBKBO14920 756 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 KIF20AO95235 890 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 KLF8O95600 359 aaPredicted RBP23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 CAVIN2O95810 425 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 MYL1P05976 194 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 PIK3CAP42336 1068 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 MAP3K7CLP57077 242 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 GAD2Q05329 585 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 KDSRQ06136 332 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 EMC10Q5UCC4 262 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 C11orf74Q86VG3 221 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 ALLCQ8N6M5 410 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 NAT16Q8N8M0 369 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 TXNDC5Q8NBS9 432 aaKnown RBP23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 SLC2A14Q8TDB8 520 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 TAF4BQ92750 862 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 OTUB2Q96DC9 234 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 FBXO44Q9H4M3 255 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 FAM49BQ9NUQ9 324 aa23.7■■□□□ 1.38
TRAPPC4-208ENST00000527680 TBC1D3BA6NDS4 549 aa23.69■■□□□ 1.38
TRAPPC4-208ENST00000527680 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.69■■□□□ 1.38
TRAPPC4-208ENST00000527680 IRF1P10914 325 aa23.69■■□□□ 1.38
TRAPPC4-208ENST00000527680 EIF2DP41214 584 aaKnown RBP23.69■■□□□ 1.38
TRAPPC4-208ENST00000527680 GRIA2P42262 883 aa23.69■■□□□ 1.38
TRAPPC4-208ENST00000527680 SYKP43405 635 aa23.69■■□□□ 1.38
TRAPPC4-208ENST00000527680 ANO4Q32M45 955 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms