RNA–Protein interactions for RNA: ENST00000527498.1

PUM1-219, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-219	ENST00000527498	NSUN4	Q96CB9	384 aa	Known RBP	4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	HSPA12B	Q96MM6	686 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	PPP1R9B	Q96SB3	815 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	PRRX2	Q99811	253 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	C7orf25	Q9BPX7	421 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	TTLL2	Q9BWV7	592 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	KIAA1683	Q9H0B3	1180 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	AP5M1	Q9H0R1	490 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	SEMA4A	Q9H3S1	761 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	RWDD1	Q9H446	243 aa	Predicted RBP	4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	MROH8	Q9H579	483 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	IRAK4	Q9NWZ3	460 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	LMCD1	Q9NZU5	365 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	ASH2L	Q9UBL3	628 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	POLG2	Q9UHN1	485 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	MUTYH	Q9UIF7	546 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	TMPRSS11E	Q9UL52	423 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	PALD1	Q9ULE6	856 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	NOL7	Q9UMY1	257 aa	Known RBP	4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	CNPY2	Q9Y2B0	182 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	ZNF281	Q9Y2X9	895 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	RWDD3	Q9Y3V2	267 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	CDY2A	Q9Y6F7	541 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	FLT1	P17948	1338 aa		4.17	□□□□□ -1.74
PUM1-219	ENST00000527498	MED19	A0JLT2	244 aa	Predicted RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	DYTN	A2CJ06	578 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	PABPN1L	A6NDY0	278 aa	Known RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	TMEM221	A6NGB7	291 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	ERICH4	A6NGS2	130 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	KIF28P	B7ZC32	967 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498		M0R296	226 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	APOL1	O14791	398 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	NCK2	O43639	380 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	SGTA	O43765	313 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	DUSP11	O75319	330 aa	Known RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	ERLIN1	O75477	346 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	TADA3	O75528	432 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	RHOBTB3	O94955	611 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	SNAI1	O95863	264 aa	Predicted RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	PRL	P01236	227 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	MME	P08473	750 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	PARP1	P09874	1014 aa	Known RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	HARS	P12081	509 aa	Known RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	TNFAIP3	P21580	790 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	NOS3	P29474	1203 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	USP8	P40818	1118 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	MCAM	P43121	646 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	KIR2DL1	P43626	348 aa	Predicted RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	KIR2DL2	P43627	348 aa	Predicted RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	MAP2K6	P52564	334 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	OXCT1	P55809	520 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	SH3BGR	P55822	239 aa	Predicted RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	NRG3	P56975	720 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	GSTO1	P78417	241 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	BEX3	Q00994	111 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	SLC6A3	Q01959	620 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	DAG1	Q14118	895 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	TRIM29	Q14134	588 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	COG2	Q14746	738 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	RBBP5	Q15291	538 aa	Known RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	SYCP1	Q15431	976 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	NKPD1	Q17RQ9	610 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	C3orf36	Q3SXR2	165 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	ARL13B	Q3SXY8	428 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	LCE2A	Q5TA79	106 aa	Predicted RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	SWSAP1	Q6NVH7	229 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	ASCL5	Q7RTU5	278 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	KANSL1	Q7Z3B3	1105 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	BMP8A	Q7Z5Y6	402 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	CILP2	Q8IUL8	1156 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	HERC6	Q8IVU3	1022 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	ARMC10	Q8N2F6	343 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	CDYL2	Q8N8U2	506 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	C3orf20	Q8ND61	904 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	NEK9	Q8TD19	979 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	NSUN6	Q8TEA1	469 aa	Known RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	TCP11	Q8WWU5	503 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	RIN2	Q8WYP3	895 aa	Predicted RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	PPP1R16B	Q96T49	567 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	SEC62	Q99442	399 aa	Known RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	EIF2AK1	Q9BQI3	630 aa	Known RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	TMEM120A	Q9BXJ8	343 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	MAK16	Q9BXY0	300 aa	Known RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	EIF2A	Q9BY44	585 aa	Known RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	UPF3B	Q9BZI7	483 aa	Known RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	TRIM7	Q9C029	511 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	SIL1	Q9H173	461 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	TRPV6	Q9H1D0	765 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	UPF3A	Q9H1J1	476 aa	Known RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	ALG13	Q9NP73	1137 aa	Known RBP	4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	SERHL	Q9NQF3	203 aa		4.16	□□□□□ -1.74
PUM1-219	ENST00000527498	AATF	Q9NY61	560 aa	Known RBP eCLIP	4.16	□□□□□ -1.74	1e-8	■■■□□ 18.2

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