RNA–Protein interactions for RNA: ENST00000526977.5

VPS28-207, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-207ENST00000526977 TMEM173Q86WV6 379 aaPredicted RBP19.81■□□□□ 0.76
VPS28-207ENST00000526977 MREGQ8N565 214 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 PCED1BQ96HM7 432 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 MED10Q9BTT4 135 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 DUSP16Q9BY84 665 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 RAB17Q9H0T7 212 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 AAASQ9NRG9 546 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 TJP2Q9UDY2 1190 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 NR2E3Q9Y5X4 410 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 MRPL42Q9Y6G3 142 aaKnown RBP19.81■□□□□ 0.76
VPS28-207ENST00000526977 COL4A6Q14031 1691 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 GOLGA6BA6NDN3 693 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 EFEMP2O95967 443 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 COILP38432 576 aaPredicted RBP19.81■□□□□ 0.76
VPS28-207ENST00000526977 PDE4CQ08493 712 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 ALS2CLQ60I27 953 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 CCDC137Q6PK04 289 aaKnown RBP19.81■□□□□ 0.76
VPS28-207ENST00000526977 PAQR9Q6ZVX9 377 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 JAMLQ86YT9 394 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 KATNAL2Q8IYT4 538 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 DCP1BQ8IZD4 617 aaKnown RBP19.81■□□□□ 0.76
VPS28-207ENST00000526977 OR10T2Q8NGX3 314 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 FAM71BQ8TC56 605 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 IPO4Q8TEX9 1081 aaKnown RBP19.81■□□□□ 0.76
VPS28-207ENST00000526977 CPXM1Q96SM3 734 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 HERPUD2Q9BSE4 406 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 TTPALQ9BTX7 342 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 B3GNT5Q9BYG0 378 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 DPH5Q9H2P9 285 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 CYLDQ9NQC7 956 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 FAM114A2Q9NRY5 505 aa19.81■□□□□ 0.76
VPS28-207ENST00000526977 F8VP50 259 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 H7C4K7 107 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 GSCP56915 257 aaPredicted RBP19.8■□□□□ 0.76
VPS28-207ENST00000526977 ZNF268Q14587 947 aaPredicted RBP19.8■□□□□ 0.76
VPS28-207ENST00000526977 USP41Q3LFD5 358 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 ZNF280DQ6N043 979 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 ANKS3Q6ZW76 656 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 SLC39A11Q8N1S5 342 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 C12orf50Q8NA57 414 aaPredicted RBP19.8■□□□□ 0.76
VPS28-207ENST00000526977 RAD9AQ99638 391 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 PKMYT1Q99640 499 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 LRRC19Q9H756 370 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 LCMT1Q9UIC8 334 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 OR6C75A6NL08 312 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 SIGLEC16A6NMB1 481 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 FAM200BP0CF97 657 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 NPR3P17342 541 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 SSR1P43307 286 aaKnown RBP19.8■□□□□ 0.76
VPS28-207ENST00000526977 DRG2P55039 364 aaKnown RBP19.8■□□□□ 0.76
VPS28-207ENST00000526977 PMF1Q6P1K2 205 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 C4orf50Q6ZRC1 276 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 TMEM110Q86TL2 294 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 HERC6Q8IVU3 1022 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 IQCKQ8N0W5 287 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 FIBCD1Q8N539 461 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 COLGALT1Q8NBJ5 622 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 BCL7CQ8WUZ0 217 aaPredicted RBP19.8■□□□□ 0.76
VPS28-207ENST00000526977 RIN2Q8WYP3 895 aaPredicted RBP19.8■□□□□ 0.76
VPS28-207ENST00000526977 TMEM169Q96HH4 297 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 HSFY1Q96LI6 401 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 SLC4A5Q9BY07 1137 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 TRIM31Q9BZY9 425 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 ZCWPW1Q9H0M4 648 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 SPG21Q9NZD8 308 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 STK39Q9UEW8 545 aa19.8■□□□□ 0.76
VPS28-207ENST00000526977 XPO1O14980 1071 aaKnown RBP19.79■□□□□ 0.76
VPS28-207ENST00000526977 TCF4P15884 667 aa19.79■□□□□ 0.76
VPS28-207ENST00000526977 ATP2A2P16615 1042 aaKnown RBP19.79■□□□□ 0.76
VPS28-207ENST00000526977 RFC1P35251 1148 aaPredicted RBP19.79■□□□□ 0.76
VPS28-207ENST00000526977 PPM1AP35813 382 aa19.79■□□□□ 0.76
VPS28-207ENST00000526977 ACADSBP45954 432 aa19.79■□□□□ 0.76
VPS28-207ENST00000526977 FAM193AP78312 1265 aa19.79■□□□□ 0.76
VPS28-207ENST00000526977 PIGHQ14442 188 aaPredicted RBP19.79■□□□□ 0.76
VPS28-207ENST00000526977 CTXN3Q4LDR2 81 aa19.79■□□□□ 0.76
VPS28-207ENST00000526977 ATP13A4Q4VNC1 1196 aa19.79■□□□□ 0.76
VPS28-207ENST00000526977 RNF168Q8IYW5 571 aaPredicted RBP19.79■□□□□ 0.76
VPS28-207ENST00000526977 PCDHB12Q9Y5F1 795 aa19.79■□□□□ 0.76
VPS28-207ENST00000526977 GOLGA8SH3BPF8 625 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 CLDN5O00501 218 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 ERBB2P04626 1255 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 KRT3P12035 628 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 HSPA9P38646 679 aaKnown RBP19.78■□□□□ 0.76
VPS28-207ENST00000526977 KCNJ1P48048 391 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 RPL34P49207 117 aaKnown RBP19.78■□□□□ 0.76
VPS28-207ENST00000526977 GYS2P54840 703 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 LRRTM3Q86VH5 581 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 XYLT1Q86Y38 959 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 EXD1Q8NHP7 514 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 C1orf54Q8WWF1 131 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 MYLPFQ96A32 169 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 SMARCD1Q96GM5 515 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 TSC2P49815 1807 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 RALAP11233 206 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 FLT3P36888 993 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 FNTAP49354 379 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 NFE2Q16621 373 aaPredicted RBP19.78■□□□□ 0.76
VPS28-207ENST00000526977 CCDC142Q17RM4 750 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 RTP2Q5QGT7 225 aa19.78■□□□□ 0.76
VPS28-207ENST00000526977 RASIP1Q5U651 963 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms