RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 MLF2Q15773 248 aaPredicted RBP17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 HECTD3Q5T447 861 aa17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 DPY19L2P1Q6NXN4 242 aa17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 AOPEPQ8N6M6 819 aa17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 SHDQ96IW2 340 aa17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 ZFYVE19Q96K21 471 aa17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 FUCA2Q9BTY2 467 aa17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 TLR8Q9NR97 1041 aaKnown RBP17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 HEBP1Q9NRV9 189 aa17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 GKN1Q9NS71 199 aa17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 LIMA1Q9UHB6 759 aaKnown RBP17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 DNAJC12Q9UKB3 198 aa17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 USP3Q9Y6I4 520 aa17.11■□□□□ 0.33
SSSCA1-202ENST00000526433 SYCE3A1L190 88 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 TULP2O00295 520 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 ARNTLO00327 626 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 XPO1O14980 1071 aaKnown RBP17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 OAS1P00973 400 aaKnown RBP17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 AVPR2P30518 371 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 USP8P40818 1118 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 CLCN5P51795 746 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 COPB1P53618 953 aaKnown RBP17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 SLC7A9P82251 487 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 PRKCQQ04759 706 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 BST2Q10589 180 aaKnown RBP17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 STILQ15468 1287 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 SKOR2Q2VWA4 1001 aaPredicted RBP17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 PKDCCQ504Y2 493 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 ASTLQ6HA08 431 aaPredicted RBP17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 TTC16Q8NEE8 873 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 ANKRD20A12PQ8NF67 263 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 RIN3Q8TB24 985 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 CSGALNACT1Q8TDX6 532 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 SH3RF2Q8TEC5 729 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 BPIFA3Q9BQP9 254 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 HSD3B7Q9H2F3 369 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 TBC1D17Q9HA65 648 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 AJAP1Q9UKB5 411 aaPredicted RBP17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 ARHGAP26Q9UNA1 814 aa17.1■□□□□ 0.33
SSSCA1-202ENST00000526433 TICRRQ7Z2Z1 1910 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 LRRC10BA6NIK2 292 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 SMTNL1A8MU46 457 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 BECN2A8MW95 431 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 CYP26A1O43174 497 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 OLFM2O95897 454 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 MBL2P11226 248 aaPredicted RBP17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 ZNF18P17022 549 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 RFX1P22670 979 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 VCPP55072 806 aaKnown RBP17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 ZXDBP98169 803 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 PLCB2Q00722 1185 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 ZNF77Q15935 545 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 RAB41Q5JT25 222 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 KLHDC7AQ5VTJ3 777 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 CC2D1AQ6P1N0 951 aaPredicted RBP17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 SHC3Q92529 594 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 FAM83CQ9BQN1 747 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 CCSER2Q9H7U1 834 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 NMUR1Q9HB89 426 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 ZNF318Q5VUA4 2279 aa17.09■□□□□ 0.33
SSSCA1-202ENST00000526433 MYO16Q9Y6X6 1858 aa17.08■□□□□ 0.33
SSSCA1-202ENST00000526433 A0A1W2PQH9 124 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 LEFTY2O00292 366 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 FOXN3O00409 490 aaPredicted RBP17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 COCHO43405 550 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 PI15O43692 258 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 SETSIPP0DME0 302 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 TCF3P15923 654 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 CD72P21854 359 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 ZNF165P49910 485 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 TUBP50607 506 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 TKTL1P51854 596 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 MTF1Q14872 753 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 CWF19L1Q69YN2 538 aaKnown RBP17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 SMYD5Q6GMV2 418 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 TPRG1Q6ZUI0 275 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 CCDC186Q7Z3E2 898 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 SCD5Q86SK9 330 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 DHX40Q8IX18 779 aaKnown RBP17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 TTC8Q8TAM2 541 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 SLC35F5Q8WV83 523 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 ZNF606Q8WXB4 792 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 KCTD13Q8WZ19 329 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 DDX23Q9BUQ8 820 aaKnown RBP17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 LSM14BQ9BX40 385 aaKnown RBP17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 LRRC4Q9HBW1 653 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 ACP6Q9NPH0 428 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 OSER1Q9NX31 292 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 SMPD4Q9NXE4 827 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 GTSE1Q9NYZ3 720 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 CPQQ9Y646 472 aa17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 HELZP42694 1942 aaKnown RBP17.08■□□□□ 0.32
SSSCA1-202ENST00000526433 KANSL1LA0AUZ9 987 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 M0QYV0 167 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 TLR5O60602 858 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 TBX18O95935 607 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 RARGP13631 454 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 GLULP15104 373 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 AOC1P19801 751 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms