RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 BPIFB4P59827 614 aa18.2■□□□□ 0.5
LMX1B-203ENST00000526117 PFKPQ01813 784 aa18.2■□□□□ 0.5
LMX1B-203ENST00000526117 UBXN1Q04323 297 aa18.2■□□□□ 0.5
LMX1B-203ENST00000526117 ARHGAP44Q17R89 818 aa18.2■□□□□ 0.5
LMX1B-203ENST00000526117 PM20D1Q6GTS8 502 aa18.2■□□□□ 0.5
LMX1B-203ENST00000526117 LRSAM1Q6UWE0 723 aa18.2■□□□□ 0.5
LMX1B-203ENST00000526117 STK32AQ8WU08 396 aa18.2■□□□□ 0.5
LMX1B-203ENST00000526117 ZNF606Q8WXB4 792 aa18.2■□□□□ 0.5
LMX1B-203ENST00000526117 DNASE1L2Q92874 299 aa18.2■□□□□ 0.5
LMX1B-203ENST00000526117 HSFY1Q96LI6 401 aa18.2■□□□□ 0.5
LMX1B-203ENST00000526117 PLA2G2FQ9BZM2 168 aa18.2■□□□□ 0.5
LMX1B-203ENST00000526117 CYLDQ9NQC7 956 aa18.2■□□□□ 0.5
LMX1B-203ENST00000526117 TLR8Q9NR97 1041 aaKnown RBP18.2■□□□□ 0.5
LMX1B-203ENST00000526117 PCDHGC3Q9UN70 934 aa18.2■□□□□ 0.5
LMX1B-203ENST00000526117 ARHGAP26Q9UNA1 814 aa18.2■□□□□ 0.5
LMX1B-203ENST00000526117 HELZP42694 1942 aaKnown RBP18.19■□□□□ 0.5
LMX1B-203ENST00000526117 MYO10Q9HD67 2058 aa18.19■□□□□ 0.5
LMX1B-203ENST00000526117 MYH10P35580 1976 aa18.19■□□□□ 0.5
LMX1B-203ENST00000526117 C2orf78A6NCI8 922 aa18.19■□□□□ 0.5
LMX1B-203ENST00000526117 F8VZ95 297 aa18.19■□□□□ 0.5
LMX1B-203ENST00000526117 FOXN3O00409 490 aaPredicted RBP18.19■□□□□ 0.5
LMX1B-203ENST00000526117 COL4A2P08572 1712 aa18.19■□□□□ 0.5
LMX1B-203ENST00000526117 MLLT6P55198 1093 aaPredicted RBP18.19■□□□□ 0.5
LMX1B-203ENST00000526117 PTK2Q05397 1052 aa18.19■□□□□ 0.5
LMX1B-203ENST00000526117 DRAP1Q14919 205 aaPredicted RBP18.19■□□□□ 0.5
LMX1B-203ENST00000526117 SYCP1Q15431 976 aa18.19■□□□□ 0.5
LMX1B-203ENST00000526117 FILIP1LQ4L180 1135 aa18.19■□□□□ 0.5
LMX1B-203ENST00000526117 KLHDC10Q6PID8 442 aa18.19■□□□□ 0.5
LMX1B-203ENST00000526117 LUZP1Q86V48 1076 aa18.19■□□□□ 0.5
LMX1B-203ENST00000526117 USP13Q92995 863 aaPredicted RBP18.19■□□□□ 0.5
LMX1B-203ENST00000526117 RSPRY1Q96DX4 576 aa18.19■□□□□ 0.5
LMX1B-203ENST00000526117 TRMT61BQ9BVS5 477 aaKnown RBP18.19■□□□□ 0.5
LMX1B-203ENST00000526117 CLIC5Q9NZA1 410 aa18.19■□□□□ 0.5
LMX1B-203ENST00000526117 A0A1W2PQC6 194 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 M0QYV0 167 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 ARNTLO00327 626 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 DPYSL4O14531 572 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 CHADO15335 359 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 NARSO43776 548 aaKnown RBP18.18■□□□□ 0.5
LMX1B-203ENST00000526117 HDCP19113 662 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 CLCN1P35523 988 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 VIPR2P41587 438 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 GPD2P43304 727 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 JAM2P57087 298 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 ZNF445P59923 1031 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 PLCB2Q00722 1185 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 USP4Q13107 963 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 ARHGAP29Q52LW3 1261 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 HECTD3Q5T447 861 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 ARHGAP18Q8N392 663 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 BPIFB1Q8TDL5 484 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 IRF7Q92985 503 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 SLC22A12Q96S37 553 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 CDK5RAP1Q96SZ6 601 aaKnown RBP18.18■□□□□ 0.5
LMX1B-203ENST00000526117 LHX5Q9H2C1 402 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 C11orf16Q9NQ32 467 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 CNGB3Q9NQW8 809 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 GMIPQ9P107 970 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 MYO16Q9Y6X6 1858 aa18.18■□□□□ 0.5
LMX1B-203ENST00000526117 TMEM221A6NGB7 291 aa18.17■□□□□ 0.5
LMX1B-203ENST00000526117 PRR33A8MZF0 331 aa18.17■□□□□ 0.5
LMX1B-203ENST00000526117 GOLGA6L19H0YKK7 550 aa18.17■□□□□ 0.5
LMX1B-203ENST00000526117 M0R296 226 aa18.17■□□□□ 0.5
LMX1B-203ENST00000526117 TULP2O00295 520 aa18.17■□□□□ 0.5
LMX1B-203ENST00000526117 CYP26A1O43174 497 aa18.17■□□□□ 0.5
LMX1B-203ENST00000526117 CKMP06732 381 aa18.17■□□□□ 0.5
LMX1B-203ENST00000526117 TKTL1P51854 596 aa18.17■□□□□ 0.5
LMX1B-203ENST00000526117 GPC5P78333 572 aa18.17■□□□□ 0.5
LMX1B-203ENST00000526117 IFRD2Q12894 506 aaPredicted RBP18.17■□□□□ 0.5
LMX1B-203ENST00000526117 RAPGEF1Q13905 1077 aa18.17■□□□□ 0.5
LMX1B-203ENST00000526117 ZNF77Q15935 545 aa18.17■□□□□ 0.5
LMX1B-203ENST00000526117 DDX42Q86XP3 938 aaKnown RBP eCLIP18.17■□□□□ 0.5
LMX1B-203ENST00000526117 ARL14EPQ8N8R7 260 aaPredicted RBP18.17■□□□□ 0.5
LMX1B-203ENST00000526117 NEK11Q8NG66 645 aa18.17■□□□□ 0.5
LMX1B-203ENST00000526117 SECISBP2LQ93073 1101 aaKnown RBP18.17■□□□□ 0.5
LMX1B-203ENST00000526117 LRRC3BQ96PB8 259 aa18.17■□□□□ 0.5
LMX1B-203ENST00000526117 SMOC2Q9H3U7 446 aa18.17■□□□□ 0.5
LMX1B-203ENST00000526117 TRPC7Q9HCX4 862 aa18.17■□□□□ 0.5
LMX1B-203ENST00000526117 FAM207AQ9NSI2 230 aaPredicted RBP18.17■□□□□ 0.5
LMX1B-203ENST00000526117 CHORDC1Q9UHD1 332 aaPredicted RBP18.17■□□□□ 0.5
LMX1B-203ENST00000526117 COCHO43405 550 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 THAP12O43422 761 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 FBXO21O94952 628 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 ZBED1O96006 694 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 GLULP15104 373 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 USP8P40818 1118 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 ACADSBP45954 432 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 KLK7P49862 253 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 NR1I3Q14994 352 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 PMF1Q6P1K2 205 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 BHLHA9Q7RTU4 235 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 TADA2BQ86TJ2 420 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 UBA3Q8TBC4 463 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 IRGQQ8WZA9 623 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 MSANTD3Q96H12 275 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 CYP2S1Q96SQ9 504 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 RNF38Q9H0F5 515 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 TSPY26PQ9H489 355 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 LRRC4Q9HBW1 653 aa18.16■□□□□ 0.5
LMX1B-203ENST00000526117 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms