RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 ATG2BQ96BY7 2078 aa17.99■□□□□ 0.47
CCS-203ENST00000526058 FRYLO94915 3013 aa17.98■□□□□ 0.47
CCS-203ENST00000526058 LEFTY2O00292 366 aa17.98■□□□□ 0.47
CCS-203ENST00000526058 LAMTOR5O43504 91 aa17.98■□□□□ 0.47
CCS-203ENST00000526058 ZDHHC11BP0C7U3 371 aa17.98■□□□□ 0.47
CCS-203ENST00000526058 TCF3P15923 654 aa17.98■□□□□ 0.47
CCS-203ENST00000526058 PDGFRLQ15198 375 aa17.98■□□□□ 0.47
CCS-203ENST00000526058 EML3Q32P44 896 aa17.98■□□□□ 0.47
CCS-203ENST00000526058 C1orf228Q6PIY5 440 aa17.98■□□□□ 0.47
CCS-203ENST00000526058 TTC39CQ8N584 583 aa17.98■□□□□ 0.47
CCS-203ENST00000526058 TMEM176AQ96HP8 235 aa17.98■□□□□ 0.47
CCS-203ENST00000526058 CHRDQ9H2X0 955 aa17.98■□□□□ 0.47
CCS-203ENST00000526058 CLSTN2Q9H4D0 955 aa17.98■□□□□ 0.47
CCS-203ENST00000526058 CCSER2Q9H7U1 834 aa17.98■□□□□ 0.47
CCS-203ENST00000526058 R4GN57 208 aa17.98■□□□□ 0.47
CCS-203ENST00000526058 PROB1E7EW31 1015 aa17.97■□□□□ 0.47
CCS-203ENST00000526058 SCAMP3O14828 347 aaKnown RBP17.97■□□□□ 0.47
CCS-203ENST00000526058 COCHO43405 550 aa17.97■□□□□ 0.47
CCS-203ENST00000526058 MBL2P11226 248 aaPredicted RBP17.97■□□□□ 0.47
CCS-203ENST00000526058 IFNAR2P48551 515 aa17.97■□□□□ 0.47
CCS-203ENST00000526058 CSTF1Q05048 431 aaKnown RBP17.97■□□□□ 0.47
CCS-203ENST00000526058 GAS6Q14393 721 aa17.97■□□□□ 0.47
CCS-203ENST00000526058 SNX30Q5VWJ9 437 aa17.97■□□□□ 0.47
CCS-203ENST00000526058 TSSK4Q6SA08 328 aa17.97■□□□□ 0.47
CCS-203ENST00000526058 CLEC17AQ6ZS10 378 aa17.97■□□□□ 0.47
CCS-203ENST00000526058 TRIM59Q8IWR1 403 aa17.97■□□□□ 0.47
CCS-203ENST00000526058 MED15Q96RN5 788 aa17.97■□□□□ 0.47
CCS-203ENST00000526058 DUSP16Q9BY84 665 aa17.97■□□□□ 0.47
CCS-203ENST00000526058 DNAI2Q9GZS0 605 aa17.97■□□□□ 0.47
CCS-203ENST00000526058 ECT2Q9H8V3 914 aa17.97■□□□□ 0.47
CCS-203ENST00000526058 MYOFQ9NZM1 2061 aa17.97■□□□□ 0.47
CCS-203ENST00000526058 PMM2O15305 246 aa17.96■□□□□ 0.47
CCS-203ENST00000526058 GNA14O95837 355 aa17.96■□□□□ 0.47
CCS-203ENST00000526058 ACO1P21399 889 aaKnown RBP17.96■□□□□ 0.47
CCS-203ENST00000526058 GJA4P35212 333 aa17.96■□□□□ 0.47
CCS-203ENST00000526058 MARSP56192 900 aaKnown RBP17.96■□□□□ 0.47
CCS-203ENST00000526058 KCNH2Q12809 1159 aa17.96■□□□□ 0.47
CCS-203ENST00000526058 CCINQ13939 588 aa17.96■□□□□ 0.47
CCS-203ENST00000526058 HECTD3Q5T447 861 aa17.96■□□□□ 0.47
CCS-203ENST00000526058 NAIF1Q69YI7 327 aaPredicted RBP17.96■□□□□ 0.47
CCS-203ENST00000526058 CPA6Q8N4T0 437 aa17.96■□□□□ 0.47
CCS-203ENST00000526058 UBR7Q8N806 425 aa17.96■□□□□ 0.47
CCS-203ENST00000526058 LMO3Q8TAP4 145 aa17.96■□□□□ 0.47
CCS-203ENST00000526058 FBXO44Q9H4M3 255 aa17.96■□□□□ 0.47
CCS-203ENST00000526058 FAM124BQ9H5Z6 455 aaPredicted RBP17.96■□□□□ 0.47
CCS-203ENST00000526058 LMBRD1Q9NUN5 540 aa17.96■□□□□ 0.47
CCS-203ENST00000526058 CFAP97Q9P2B7 532 aa17.96■□□□□ 0.47
CCS-203ENST00000526058 RWDD2AQ9UIY3 292 aa17.96■□□□□ 0.47
CCS-203ENST00000526058 FBXO4Q9UKT5 387 aa17.96■□□□□ 0.47
CCS-203ENST00000526058 ZNF292O60281 2723 aa17.95■□□□□ 0.46
CCS-203ENST00000526058 CYP26A1O43174 497 aa17.95■□□□□ 0.46
CCS-203ENST00000526058 LRRC32Q14392 662 aa17.95■□□□□ 0.46
CCS-203ENST00000526058 ARHGAP17Q68EM7 881 aa17.95■□□□□ 0.46
CCS-203ENST00000526058 Q6ZS52 159 aa17.95■□□□□ 0.46
CCS-203ENST00000526058 KAT5Q92993 513 aa17.95■□□□□ 0.46
CCS-203ENST00000526058 ATP2A3Q93084 1043 aa17.95■□□□□ 0.46
CCS-203ENST00000526058 ZFRQ96KR1 1074 aaKnown RBP17.95■□□□□ 0.46
CCS-203ENST00000526058 NT5C1BQ96P26 610 aa17.95■□□□□ 0.46
CCS-203ENST00000526058 FBRSL1Q9HCM7 1045 aaKnown RBP17.95■□□□□ 0.46
CCS-203ENST00000526058 PNPLA8Q9NP80 782 aa17.95■□□□□ 0.46
CCS-203ENST00000526058 PRMT8Q9NR22 394 aaPredicted RBP17.95■□□□□ 0.46
CCS-203ENST00000526058 OSER1Q9NX31 292 aa17.95■□□□□ 0.46
CCS-203ENST00000526058 SCML2Q9UQR0 700 aa17.95■□□□□ 0.46
CCS-203ENST00000526058 FAM186AA6NE01 2351 aa17.95■□□□□ 0.46
CCS-203ENST00000526058 PTPRZ1P23471 2315 aaPredicted RBP17.94■□□□□ 0.46
CCS-203ENST00000526058 CFAP54Q96N23 3096 aa17.94■□□□□ 0.46
CCS-203ENST00000526058 TRDMT1O14717 391 aaKnown RBP17.94■□□□□ 0.46
CCS-203ENST00000526058 P4HA2O15460 535 aa17.94■□□□□ 0.46
CCS-203ENST00000526058 GFRA3O60609 400 aa17.94■□□□□ 0.46
CCS-203ENST00000526058 TBXAS1P24557 533 aaPredicted RBP17.94■□□□□ 0.46
CCS-203ENST00000526058 TUBP50607 506 aa17.94■□□□□ 0.46
CCS-203ENST00000526058 GALK1P51570 392 aa17.94■□□□□ 0.46
CCS-203ENST00000526058 KIF11P52732 1056 aa17.94■□□□□ 0.46
CCS-203ENST00000526058 ZNF528Q3MIS6 628 aa17.94■□□□□ 0.46
CCS-203ENST00000526058 TMEM196Q5HYL7 178 aa17.94■□□□□ 0.46
CCS-203ENST00000526058 DGKKQ5KSL6 1271 aa17.94■□□□□ 0.46
CCS-203ENST00000526058 FSTL4Q6MZW2 842 aa17.94■□□□□ 0.46
CCS-203ENST00000526058 MAMSTRQ6ZN01 415 aa17.94■□□□□ 0.46
CCS-203ENST00000526058 ASCL5Q7RTU5 278 aa17.94■□□□□ 0.46
CCS-203ENST00000526058 EHBP1Q8NDI1 1231 aa17.94■□□□□ 0.46
CCS-203ENST00000526058 NKD2Q969F2 451 aaPredicted RBP17.94■□□□□ 0.46
CCS-203ENST00000526058 NMUR1Q9HB89 426 aa17.94■□□□□ 0.46
CCS-203ENST00000526058 TLR8Q9NR97 1041 aaKnown RBP17.94■□□□□ 0.46
CCS-203ENST00000526058 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.94■□□□□ 0.46
CCS-203ENST00000526058 EP300Q09472 2414 aaPredicted RBP17.94■□□□□ 0.46
CCS-203ENST00000526058 A0A1W2PQH9 124 aa17.93■□□□□ 0.46
CCS-203ENST00000526058 PRR23AA6NEV1 266 aa17.93■□□□□ 0.46
CCS-203ENST00000526058 TLR5O60602 858 aa17.93■□□□□ 0.46
CCS-203ENST00000526058 FGFR1OPO95684 399 aaKnown RBP17.93■□□□□ 0.46
CCS-203ENST00000526058 TBX18O95935 607 aa17.93■□□□□ 0.46
CCS-203ENST00000526058 AFPP02771 609 aaKnown RBP17.93■□□□□ 0.46
CCS-203ENST00000526058 CCDC192P0DO97 292 aa17.93■□□□□ 0.46
CCS-203ENST00000526058 YWHAEP62258 255 aaKnown RBP17.93■□□□□ 0.46
CCS-203ENST00000526058 SATB1Q01826 763 aa17.93■□□□□ 0.46
CCS-203ENST00000526058 CETN1Q12798 172 aa17.93■□□□□ 0.46
CCS-203ENST00000526058 SGO2Q562F6 1265 aa17.93■□□□□ 0.46
CCS-203ENST00000526058 RRAGAQ7L523 313 aa17.93■□□□□ 0.46
CCS-203ENST00000526058 TTC30AQ86WT1 665 aa17.93■□□□□ 0.46
CCS-203ENST00000526058 CREBRFQ8IUR6 639 aa17.93■□□□□ 0.46
CCS-203ENST00000526058 ARHGEF19Q8IW93 802 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms